Cow genome map
| Conread name: | OvF2-UMC-pd0fol-009-c04 |
| Conread position: | 2-128 |
| Cow position: | chr20:5077163-5077288 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 2-265 |
| Cow position: | chr20:6259115-6258848 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 84 |
| Conread position: | 2-329 |
| Cow position: | chr20:9410541-9410857 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 95 |
| Conread position: | 2-341 |
| Cow position: | chr20:29806763-29806429 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 105, 55 |
| Conread position: | 2-359 |
| Cow position: | chr20:40255841-40256184 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 38 |
| Conread position: | 2-365 |
| Cow position: | chr20:13954804-13955152 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 26 |
| Conread position: | 2-367 |
| Cow position: | chr20:24904367-24904016 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-368 |
| Cow position: | chr20:3782527-3782172 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-368 |
| Cow position: | chr20:7512758-7512405 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 77 |
| Conread position: | 2-368 |
| Cow position: | chr20:9588953-9589309 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 105 |
| Conread position: | 2-368 |
| Cow position: | chr20:14211201-14210847 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 188, 83 |
| Conread position: | 2-368 |
| Cow position: | chr20:14757093-14756725 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 103 |
| Conread position: | 2-368 |
| Cow position: | chr20:15090195-15089841 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-368 |
| Cow position: | chr20:17658055-17657701 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 74 |
| Conread position: | 2-368 |
| Cow position: | chr20:19364704-19364353 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 46 |
| Conread position: | 2-368 |
| Cow position: | chr20:27994347-27993994 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 33 |
| Conread position: | 2-368 |
| Cow position: | chr20:29371244-29370890 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 2-372 |
| Cow position: | chr20:24399688-24399330 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 3-370 |
| Cow position: | chr20:25658845-25658491 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 47 |
| Conread position: | 4-367 |
| Cow position: | chr20:22185833-22185484 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 186, 84 |
| Conread position: | 4-368 |
| Cow position: | chr20:15526924-15527276 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 98 |
| Conread position: | 6-371 |
| Cow position: | chr20:28956770-28956417 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 96 |
| Conread position: | 14-368 |
| Cow position: | chr20:19155968-19155634 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 176, 31 |
| Conread position: | 14-372 |
| Cow position: | chr20:13816811-13817154 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 213, 88 |
| Conread position: | 16-368 |
| Cow position: | chr20:20731449-20731790 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 132, 85 |
| Conread position: | 20-370 |
| Cow position: | chr20:32085259-32084907 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 81 |
| Conread position: | 30-370 |
| Cow position: | chr20:37271476-37271803 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 82, 55 |
| Conread position: | 31-359 |
| Cow position: | chr20:7995337-7995018 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 159, 72 |
| Conread position: | 34-359 |
| Cow position: | chr20:35112240-35112551 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 121, 67 |
| Conread position: | 37-368 |
| Cow position: | chr20:20935918-20935606 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 43-370 |
| Cow position: | chr20:26999714-27000028 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 45-346 |
| Cow position: | chr20:12827248-12826966 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 171, 16 |
| Conread position: | 60-368 |
| Cow position: | chr20:14877295-14877589 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 41 |
| Conread position: | 67-367 |
| Cow position: | chr20:17667983-17668275 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 34 |
Show alignments to all cow chromosomes.