Cow genome map
| Conread name: | OvF2-UMC-pd0fol-009-c04 |
| Conread position: | 1-368 |
| Cow position: | chr22:12625444-12625091 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 93 |
| Conread position: | 1-368 |
| Cow position: | chr22:14817525-14817181 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-245 |
| Cow position: | chr22:8480332-8480576 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-245 |
| Cow position: | chr22:8504577-8504821 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-262 |
| Cow position: | chr22:40385752-40386016 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 44, 96 |
| Conread position: | 2-266 |
| Cow position: | chr22:36543356-36543098 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-327 |
| Cow position: | chr22:36584515-36584206 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-343 |
| Cow position: | chr22:288518-288191 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 95 |
| Conread position: | 2-346 |
| Cow position: | chr22:29956077-29955744 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-348 |
| Cow position: | chr22:8339531-8339863 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-350 |
| Cow position: | chr22:5015201-5015540 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 99 |
| Conread position: | 2-357 |
| Cow position: | chr22:11838306-11837969 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 101 |
| Conread position: | 2-360 |
| Cow position: | chr22:25942363-25942696 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 158, 99 |
| Conread position: | 2-365 |
| Cow position: | chr22:13696807-13696457 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 92 |
| Conread position: | 2-368 |
| Cow position: | chr22:9371471-9371825 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 2-368 |
| Cow position: | chr22:11988592-11988237 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 99 |
| Conread position: | 2-368 |
| Cow position: | chr22:19600687-19600333 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 146, 59 |
| Conread position: | 2-368 |
| Cow position: | chr22:25340267-25340620 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 101 |
| Conread position: | 2-368 |
| Cow position: | chr22:31598423-31598777 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 33 |
| Conread position: | 2-368 |
| Cow position: | chr22:32660396-32660743 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 106, 92 |
| Conread position: | 2-368 |
| Cow position: | chr22:36503587-36503241 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 95 |
| Conread position: | 2-368 |
| Cow position: | chr22:39465427-39465073 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-368 |
| Cow position: | chr22:41846451-41846101 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-370 |
| Cow position: | chr22:28129867-28130223 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-370 |
| Cow position: | chr22:36556025-36555679 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 34 |
| Conread position: | 2-370 |
| Cow position: | chr22:36572420-36572070 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 30 |
| Conread position: | 2-370 |
| Cow position: | chr22:43788842-43789197 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 99 |
| Conread position: | 2-371 |
| Cow position: | chr22:14510403-14510046 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 95 |
| Conread position: | 2-371 |
| Cow position: | chr22:42233892-42234245 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 80 |
| Conread position: | 3-179 |
| Cow position: | chr22:34615155-34615329 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 3-281 |
| Cow position: | chr22:26167673-26167401 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 93 |
| Conread position: | 3-368 |
| Cow position: | chr22:10361040-10361391 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 98 |
| Conread position: | 3-368 |
| Cow position: | chr22:34931964-34931614 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 94 |
| Conread position: | 3-370 |
| Cow position: | chr22:10160839-10161201 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 102 |
| Conread position: | 4-367 |
| Cow position: | chr22:540251-540602 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 189, 57 |
| Conread position: | 4-368 |
| Cow position: | chr22:24817645-24817295 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 178, 62 |
| Conread position: | 16-368 |
| Cow position: | chr22:32019431-32019094 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 20-368 |
| Cow position: | chr22:35934835-35934498 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 170, 16 |
| Conread position: | 23-370 |
| Cow position: | chr22:6722432-6722100 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 23-370 |
| Cow position: | chr22:43045581-43045245 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 25-362 |
| Cow position: | chr22:38553373-38553695 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 206, 76 |
| Conread position: | 30-368 |
| Cow position: | chr22:47958117-47957799 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 163, 32 |
| Conread position: | 30-370 |
| Cow position: | chr22:43261010-43261334 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 158, 25 |
| Conread position: | 56-368 |
| Cow position: | chr22:44462466-44462766 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 108, 45 |
| Conread position: | 72-367 |
| Cow position: | chr22:47462416-47462699 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 29 |
| Conread position: | 91-368 |
| Cow position: | chr22:35755490-35755224 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 161 |
| Conread position: | 97-370 |
| Cow position: | chr22:8876248-8876517 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 163 |
| Conread position: | 117-367 |
| Cow position: | chr22:6493102-6493337 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 128-368 |
| Cow position: | chr22:37032636-37032406 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 183, 121 |
| Conread position: | 152-367 |
| Cow position: | chr22:47926914-47927116 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 70 |
Show alignments to all cow chromosomes.