Cow genome map
| Conread name: | OvF2-UMC-pd0fol-009-c04 |
| Conread position: | 2-138 |
| Cow position: | chr24:19185354-19185486 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 2-278 |
| Cow position: | chr24:24249301-24249022 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 56 |
| Conread position: | 2-286 |
| Cow position: | chr24:14865831-14865562 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 77, 50 |
| Conread position: | 2-286 |
| Cow position: | chr24:14867757-14867488 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 77, 50 |
| Conread position: | 2-346 |
| Cow position: | chr24:36721644-36721978 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-368 |
| Cow position: | chr24:13374314-13373960 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 188, 86 |
| Conread position: | 2-368 |
| Cow position: | chr24:14760093-14760447 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 2-368 |
| Cow position: | chr24:15371980-15372326 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-368 |
| Cow position: | chr24:17105677-17105322 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 95 |
| Conread position: | 2-368 |
| Cow position: | chr24:18223280-18222925 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-369 |
| Cow position: | chr24:28688630-28688966 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 2-370 |
| Cow position: | chr24:29179562-29179916 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 104 |
| Conread position: | 2-371 |
| Cow position: | chr24:39956902-39956553 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 100 |
| Conread position: | 2-372 |
| Cow position: | chr24:9071641-9071289 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 3-350 |
| Cow position: | chr24:45003629-45003952 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 3-367 |
| Cow position: | chr24:6508952-6508586 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 189, 42 |
| Conread position: | 3-368 |
| Cow position: | chr24:16266664-16267006 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 52 |
| Conread position: | 3-368 |
| Cow position: | chr24:32608512-32608865 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 98 |
| Conread position: | 4-346 |
| Cow position: | chr24:1841670-1841339 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 186, 97 |
| Conread position: | 4-365 |
| Cow position: | chr24:29084463-29084113 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 112, 97 |
| Conread position: | 4-368 |
| Cow position: | chr24:6326169-6325818 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 186, 97 |
| Conread position: | 4-368 |
| Cow position: | chr24:14194646-14194295 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 188, 62 |
| Conread position: | 4-368 |
| Cow position: | chr24:29190490-29190837 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 97 |
| Conread position: | 4-368 |
| Cow position: | chr24:36036624-36036277 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 97 |
| Conread position: | 4-370 |
| Cow position: | chr24:12199164-12198800 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 171, 97 |
| Conread position: | 14-359 |
| Cow position: | chr24:6524209-6524541 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 87 |
| Conread position: | 14-366 |
| Cow position: | chr24:12203298-12202965 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 102, 52 |
| Conread position: | 14-368 |
| Cow position: | chr24:17566063-17566398 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 176, 47 |
| Conread position: | 14-370 |
| Cow position: | chr24:39680716-39681067 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 52 |
| Conread position: | 16-369 |
| Cow position: | chr24:33122141-33122481 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 16-370 |
| Cow position: | chr24:19643508-19643844 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 151, 75 |
| Conread position: | 31-368 |
| Cow position: | chr24:38588011-38588336 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 117, 70 |
| Conread position: | 47-368 |
| Cow position: | chr24:32823877-32823568 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 54 |
| Conread position: | 163-370 |
| Cow position: | chr24:27762603-27762802 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 169 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 187-368 |
| Cow position: | chr24:11297347-11297526 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 161, 117 |
Show alignments to all cow chromosomes.