Cow genome map
| Conread name: | OvF2-UMC-pd0fol-009-c04 |
| Conread position: | 1-183 |
| Cow position: | chr28:30328986-30328812 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-350 |
| Cow position: | chr28:601031-600689 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 189, 100 |
| Conread position: | 2-250 |
| Cow position: | chr28:6046950-6047200 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-262 |
| Cow position: | chr28:3745121-3745378 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 40 |
| Conread position: | 2-308 |
| Cow position: | chr28:8971231-8971538 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 95 |
| Conread position: | 2-366 |
| Cow position: | chr28:30870226-30870580 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 99 |
| Conread position: | 2-367 |
| Cow position: | chr28:7005181-7005535 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-367 |
| Cow position: | chr28:14511594-14511940 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 2-367 |
| Cow position: | chr28:14666300-14666652 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 72 |
| Conread position: | 2-368 |
| Cow position: | chr28:5111567-5111216 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-368 |
| Cow position: | chr28:5940640-5940994 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 95 |
| Conread position: | 2-368 |
| Cow position: | chr28:6474098-6473748 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 188, 93 |
| Conread position: | 2-368 |
| Cow position: | chr28:8717799-8717445 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-368 |
| Cow position: | chr28:10772237-10772584 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 2-368 |
| Cow position: | chr28:23615297-23615652 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 99 |
| Conread position: | 2-368 |
| Cow position: | chr28:23674971-23675321 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 18 |
| Conread position: | 2-368 |
| Cow position: | chr28:23794414-23794072 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 2-368 |
| Cow position: | chr28:34083117-34082762 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 73 |
| Conread position: | 2-370 |
| Cow position: | chr28:3001702-3001349 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-370 |
| Cow position: | chr28:8786466-8786826 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 103 |
| Conread position: | 2-371 |
| Cow position: | chr28:5804423-5804777 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 95 |
| Conread position: | 3-245 |
| Cow position: | chr28:2280746-2280505 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 62 |
| Conread position: | 3-368 |
| Cow position: | chr28:17602884-17602533 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 26 |
| Conread position: | 4-367 |
| Cow position: | chr28:13606587-13606937 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 4-368 |
| Cow position: | chr28:1508032-1508386 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 97 |
| Conread position: | 4-372 |
| Cow position: | chr28:17599837-17599473 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 97 |
| Conread position: | 14-365 |
| Cow position: | chr28:12936108-12935769 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 102, 87 |
| Conread position: | 14-372 |
| Cow position: | chr28:21856038-21855690 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 170, 50 |
| Conread position: | 14-372 |
| Cow position: | chr28:29473165-29473503 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 168, 48 |
| Conread position: | 15-370 |
| Cow position: | chr28:29807272-29806931 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 86 |
| Conread position: | 18-372 |
| Cow position: | chr28:14150158-14150500 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 137, 83 |
| Conread position: | 21-351 |
| Cow position: | chr28:21379668-21379986 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 169, 82 |
| Conread position: | 58-368 |
| Cow position: | chr28:23868448-23868746 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 124, 43 |
| Conread position: | 76-365 |
| Cow position: | chr28:15715200-15715476 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 29 |
| Conread position: | 76-368 |
| Cow position: | chr28:5768179-5768458 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 72, 25 |
| Conread position: | 90-370 |
| Cow position: | chr28:24997671-24997398 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 11 |
| Conread position: | 146-364 |
| Cow position: | chr28:17686344-17686135 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 44, 99 |
| Conread position: | 183-368 |
| Cow position: | chr28:1550171-1550349 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.