Cow genome map

Conread name: OvF2-UMC-pd0fol-009-c04

Conread position: 1-252
Cow position: chr7:21568267-21568013 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 96

Conread position: 1-266
Cow position: chr7:44590897-44590628 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 27

Conread position: 1-370
Cow position: chr7:48242380-48242729 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 54

Conread position: 2-198
Cow position: chr7:33718877-33719079 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 83, 98

Conread position: 2-264
Cow position: chr7:41444204-41444456 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 78

Conread position: 2-350
Cow position: chr7:19949700-19949367 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 19

Conread position: 2-350
Cow position: chr7:42224619-42224262 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 260
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 138, 100

Conread position: 2-359
Cow position: chr7:19467322-19466978 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 99

Conread position: 2-362
Cow position: chr7:24874123-24873773 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 148, 34

Conread position: 2-365
Cow position: chr7:34973516-34973853 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 17

Conread position: 2-366
Cow position: chr7:12660035-12659690 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 73

Conread position: 2-367
Cow position: chr7:43281444-43281797 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 89

Conread position: 2-368
Cow position: chr7:12483378-12483728 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 12

Conread position: 2-368
Cow position: chr7:19097122-19096768 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 101

Conread position: 2-368
Cow position: chr7:26196856-26196498 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 27

Conread position: 2-368
Cow position: chr7:31877650-31877998 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 2-368
Cow position: chr7:43110592-43110242 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 59

Conread position: 2-368
Cow position: chr7:60727280-60726925 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 50, 101

Conread position: 2-368
Cow position: chr7:60741765-60741413 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 99

Conread position: 2-368
Cow position: chr7:63947938-63947590 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 64

Conread position: 2-368
Cow position: chr7:67815806-67816171 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 41, 104

Conread position: 2-370
Cow position: chr7:467411-467047 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 95

Conread position: 2-370
Cow position: chr7:13238432-13238075 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 99

Conread position: 2-370
Cow position: chr7:47910142-47909790 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 38

Conread position: 2-372
Cow position: chr7:27142169-27142525 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 104

Conread position: 2-372
Cow position: chr7:62732153-62732510 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 50

Conread position: 3-138
Cow position: chr7:40990447-40990581 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 114
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 3-204
Cow position: chr7:30116047-30115845 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 93

Conread position: 3-265
Cow position: chr7:39324744-39324990 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 94

Conread position: 3-271
Cow position: chr7:30305992-30306263 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 94

Conread position: 3-368
Cow position: chr7:45928995-45928643 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 94

Conread position: 3-368
Cow position: chr7:56822544-56822193 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 98

Conread position: 3-368
Cow position: chr7:63379698-63379349 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 52

Conread position: 3-368
Cow position: chr7:63389169-63389521 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 157, 53

Conread position: 4-346
Cow position: chr7:14212253-14211918 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 147, 97

Conread position: 4-362
Cow position: chr7:40708928-40709274 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 98

Conread position: 4-367
Cow position: chr7:19044043-19043674 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 71

Conread position: 4-368
Cow position: chr7:29363814-29363476 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 71, 0

Conread position: 4-368
Cow position: chr7:41463210-41463560 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 98

Conread position: 4-370
Cow position: chr7:41873143-41872795 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 76

Conread position: 5-368
Cow position: chr7:49647288-49647637 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 113, 96

Conread position: 5-368
Cow position: chr7:69018432-69018776 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 75

Conread position: 8-370
Cow position: chr7:40404454-40404797 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 128, 66

Conread position: 13-367
Cow position: chr7:65431725-65431383 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 65

Conread position: 14-358
Cow position: chr7:66224490-66224161 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 19, 14

Conread position: 14-367
Cow position: chr7:26837606-26837944 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 48

Conread position: 14-368
Cow position: chr7:10604910-10604565 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 26

Conread position: 14-368
Cow position: chr7:23129988-23130330 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 172, 87

Conread position: 14-368
Cow position: chr7:51018771-51019112 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 84, 183

Conread position: 14-368
Cow position: chr7:66011765-66012124 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 241
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 129, 18

Conread position: 15-372
Cow position: chr7:48860550-48860205 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 128, 86

Conread position: 17-371
Cow position: chr7:23457823-23457484 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 69

Conread position: 30-370
Cow position: chr7:10070734-10070408 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 117, 71

Conread position: 36-368
Cow position: chr7:53038068-53037749 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 154, 65

Conread position: 45-359
Cow position: chr7:42297080-42296783 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 56

Conread position: 47-365
Cow position: chr7:33956978-33957292 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 55

Conread position: 55-368
Cow position: chr7:5404549-5404255 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 111, 46

Conread position: 58-368
Cow position: chr7:24798152-24797854 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 94, 44

Conread position: 62-370
Cow position: chr7:39902580-39902873 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 39

Conread position: 66-360
Cow position: chr7:51630240-51630519 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 126, 39

Conread position: 87-368
Cow position: chr7:67432106-67432371 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 61, 14

Conread position: 87-370
Cow position: chr7:62792804-62793075 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 14, 93

Conread position: 88-358
Cow position: chr7:51193951-51194213 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 13

Conread position: 89-368
Cow position: chr7:21009904-21009641 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 12

Conread position: 102-370
Cow position: chr7:19457348-19457074 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 238

Conread position: 108-370
Cow position: chr7:47045510-47045754 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 74, 0

Conread position: 113-368
Cow position: chr7:32282975-32283210 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 134, 32

Conread position: 118-366
Cow position: chr7:33809716-33809952 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 72, 108

Conread position: 122-370
Cow position: chr7:4451659-4451894 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 135-370
Cow position: chr7:49750203-49750429 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 187
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 10, 118

Conread position: 152-367
Cow position: chr7:17270159-17269957 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 70

Conread position: 186-368
Cow position: chr7:1721811-1721642 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 0

Show alignments to all cow chromosomes.