Cow genome map
Conread name: | OvF2-UMC-pd0fol-009-c04 |
Conread position: | 1-136 |
Cow position: | chr8:12452411-12452545 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 2-139 |
Cow position: | chr8:23224127-23224256 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 2-266 |
Cow position: | chr8:13373479-13373746 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 91 |
Conread position: | 2-334 |
Cow position: | chr8:6725592-6725273 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 243 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 120, 83 |
Conread position: | 2-359 |
Cow position: | chr8:48514775-48514444 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 2-365 |
Cow position: | chr8:49600962-49600614 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 71 |
Conread position: | 2-367 |
Cow position: | chr8:8386899-8387251 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 95 |
Conread position: | 2-368 |
Cow position: | chr8:8009744-8010105 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 259 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 48, 100 |
Conread position: | 2-368 |
Cow position: | chr8:8918361-8918004 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 257 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 153, 59 |
Conread position: | 2-368 |
Cow position: | chr8:12794756-12795100 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 261 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 159, 68 |
Conread position: | 2-368 |
Cow position: | chr8:18080324-18080671 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 95 |
Conread position: | 2-368 |
Cow position: | chr8:18402969-18402608 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 256 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 101, 268 |
Conread position: | 2-368 |
Cow position: | chr8:22030473-22030827 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 99 |
Conread position: | 2-368 |
Cow position: | chr8:24373082-24372736 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 41 |
Conread position: | 2-368 |
Cow position: | chr8:49619799-49620151 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 255 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 74, 68 |
Conread position: | 2-368 |
Cow position: | chr8:51061784-51061429 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 250 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 188, 43 |
Conread position: | 2-368 |
Cow position: | chr8:51884399-51884048 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 244 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 190, 12 |
Conread position: | 2-368 |
Cow position: | chr8:59258642-59258279 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 99 |
Conread position: | 2-370 |
Cow position: | chr8:5244078-5243729 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 26 |
Conread position: | 2-370 |
Cow position: | chr8:18056640-18056996 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 99 |
Conread position: | 2-370 |
Cow position: | chr8:24868852-24868505 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 2-370 |
Cow position: | chr8:51701927-51702281 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 264 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 141, 25 |
Conread position: | 2-372 |
Cow position: | chr8:19545703-19546059 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 191, 100 |
Conread position: | 3-367 |
Cow position: | chr8:26624773-26625127 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 98 |
Conread position: | 3-367 |
Cow position: | chr8:29920588-29920241 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 246 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 66, 47 |
Conread position: | 3-368 |
Cow position: | chr8:11781295-11781648 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 250 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 187, 47 |
Conread position: | 3-368 |
Cow position: | chr8:32966464-32966835 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 252 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 151, 93 |
Conread position: | 3-368 |
Cow position: | chr8:42748407-42748760 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 260 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 145, 98 |
Conread position: | 3-369 |
Cow position: | chr8:4923262-4923616 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 42 |
Conread position: | 3-370 |
Cow position: | chr8:6077593-6077267 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 4-361 |
Cow position: | chr8:38562084-38561739 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 97 |
Conread position: | 4-368 |
Cow position: | chr8:13222984-13222624 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 267 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 58, 46 |
Conread position: | 4-369 |
Cow position: | chr8:25613633-25613986 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 97 |
Conread position: | 14-344 |
Cow position: | chr8:47667191-47666872 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 66 |
Conread position: | 14-346 |
Cow position: | chr8:45070301-45070621 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 235 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 176, 87 |
Conread position: | 14-368 |
Cow position: | chr8:19333958-19334301 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 237 |
Conread position: | 14-370 |
Cow position: | chr8:53004524-53004178 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 247 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 72, 135 |
Conread position: | 15-362 |
Cow position: | chr8:53428765-53429097 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 248 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 149, 35 |
Conread position: | 15-368 |
Cow position: | chr8:38597280-38596939 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 247 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 121, 86 |
Conread position: | 16-368 |
Cow position: | chr8:12056939-12057282 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 247 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 92, 85 |
Conread position: | 17-370 |
Cow position: | chr8:30418000-30418335 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 242 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 20-372 |
Cow position: | chr8:53450422-53450762 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 81 |
Conread position: | 22-349 |
Cow position: | chr8:13322808-13322483 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 226 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 146, 79 |
Conread position: | 25-368 |
Cow position: | chr8:50949228-50948904 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 54 |
Conread position: | 35-370 |
Cow position: | chr8:28230532-28230208 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 54 |
Conread position: | 50-370 |
Cow position: | chr8:21948853-21948541 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 210 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 140, 51 |
Conread position: | 58-368 |
Cow position: | chr8:45131320-45131024 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 215 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 132, 44 |
Conread position: | 68-370 |
Cow position: | chr8:55714541-55714837 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 221 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 99, 33 |
Conread position: | 183-367 |
Cow position: | chr8:39466946-39467125 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 165, 64 |
Conread position: | 186-370 |
Cow position: | chr8:42787167-42786979 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 153 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 62, 173 |
Conread position: | 190-368 |
Cow position: | chr8:40889094-40888919 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 135 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 78, 9 |
Show alignments to all cow chromosomes.