Cow genome map
| Conread name: | OvF2-UMC-pd0fol-009-c04 |
| Conread position: | 1-350 |
| Cow position: | chr9:37067857-37068208 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 69 |
| Conread position: | 1-368 |
| Cow position: | chr9:3222485-3222830 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 83 |
| Conread position: | 2-217 |
| Cow position: | chr9:59508167-59507950 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 95 |
| Conread position: | 2-266 |
| Cow position: | chr9:388417-388686 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 95 |
| Conread position: | 2-349 |
| Cow position: | chr9:825913-825557 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 27, 31 |
| Conread position: | 2-358 |
| Cow position: | chr9:51692608-51692261 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-368 |
| Cow position: | chr9:21412324-21412669 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 2-368 |
| Cow position: | chr9:23029004-23028664 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 72 |
| Conread position: | 2-368 |
| Cow position: | chr9:27038120-27038479 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 146, 29 |
| Conread position: | 2-368 |
| Cow position: | chr9:36844918-36844574 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 60, 100 |
| Conread position: | 2-368 |
| Cow position: | chr9:44920249-44920628 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 70 |
| Conread position: | 2-368 |
| Cow position: | chr9:59479836-59479491 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 95 |
| Conread position: | 2-370 |
| Cow position: | chr9:3411881-3411527 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 23 |
| Conread position: | 2-372 |
| Cow position: | chr9:218104-217746 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 188, 100 |
| Conread position: | 3-138 |
| Cow position: | chr9:30475270-30475404 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 3-368 |
| Cow position: | chr9:17870507-17870870 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 98 |
| Conread position: | 3-368 |
| Cow position: | chr9:29337916-29338273 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 3-370 |
| Cow position: | chr9:1640268-1640623 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 187, 98 |
| Conread position: | 4-369 |
| Cow position: | chr9:28681214-28681567 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 98 |
| Conread position: | 14-367 |
| Cow position: | chr9:30401307-30401647 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 36 |
| Conread position: | 14-368 |
| Cow position: | chr9:10567341-10566995 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 87 |
| Conread position: | 15-368 |
| Cow position: | chr9:3806621-3806960 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 86 |
| Conread position: | 15-372 |
| Cow position: | chr9:17633512-17633857 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 128, 87 |
| Conread position: | 16-368 |
| Cow position: | chr9:9958159-9957819 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 17-368 |
| Cow position: | chr9:52408303-52407958 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 81, 112 |
| Conread position: | 20-368 |
| Cow position: | chr9:22803622-22803285 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 170, 206 |
| Conread position: | 38-368 |
| Cow position: | chr9:24996425-24996723 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 284, 27 |
| Conread position: | 42-357 |
| Cow position: | chr9:25548103-25547799 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 60 |
| Conread position: | 42-368 |
| Cow position: | chr9:33068440-33068131 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 148, 15 |
| Conread position: | 57-370 |
| Cow position: | chr9:37168539-37168834 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 44 |
| Conread position: | 67-368 |
| Cow position: | chr9:54996950-54997239 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 34 |
| Conread position: | 81-368 |
| Cow position: | chr9:5840057-5839770 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 111, 20 |
| Conread position: | 88-368 |
| Cow position: | chr9:46670029-46670293 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 95-341 |
| Cow position: | chr9:22755820-22755580 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 98, 157 |
| Conread position: | 98-367 |
| Cow position: | chr9:44820992-44821249 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 94, 161 |
| Conread position: | 115-333 |
| Cow position: | chr9:29826355-29826158 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 128-368 |
| Cow position: | chr9:33999374-33999598 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 171-368 |
| Cow position: | chr9:4862401-4862209 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 183-368 |
| Cow position: | chr9:20577956-20578128 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.