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Cow genome map

           
Conread name:
           
OvF2-UMC-pd0fol-009-c12
        

               
Conread position:
               
1-154
               

               
Cow position:
               
chr13:17993934-17993781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr13:20606158-20606311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr13:26720826-26720979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr13:20814311-20814467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 116
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr13:8408582-8408424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr13:52637260-52637101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr13:11670769-11670607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr13:19174732-19174894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr13:49476037-49475872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr13:54353082-54353243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr13:18999494-18999329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr13:57985979-57986134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr13:5092435-5092599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr13:13265520-13265359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr13:20534855-20534695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:13471455-13471627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:15041514-15041682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:17338388-17338218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:19022230-19022057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:33854725-33854888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:49283821-49283985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:52055633-52055800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr13:55494567-55494726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr13:51207525-51207697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr13:20115207-20115034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr13:19876374-19876550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr13:58333004-58332830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:5735334-5735149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:12423365-12423189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:17855331-17855154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:23685040-23685216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:37614237-37614411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:39376481-39376305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:43183208-43183031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:46516020-46515846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
83, 146
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:61188492-61188315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr13:12770234-12770409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 37
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr13:39826516-39826339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr13:52464700-52464523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr13:11147016-11146836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr13:17057888-17058073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr13:39517647-39517463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr13:6848885-6848704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr13:42113978-42113795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr13:50601743-50601926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:1155744-1155926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:4968589-4968773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:6889703-6889518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
114, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:7716727-7716911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:12768960-12769144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:14576172-14575994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:14878992-14879176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:15356769-15356588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:28552547-28552365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:29050997-29051180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:46349945-46350128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:47007760-47007935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
174, 65
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:48222589-48222770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:52283871-52283688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr13:61047173-61046991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:5671627-5671811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
177, 99
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:14544094-14543913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:23960843-23961029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
94, 146
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:27550698-27550513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr13:34261190-34261013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr13:11933643-11933832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr13:16247607-16247421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr13:19180466-19180652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr13:20360238-20360052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr13:34873548-34873361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr13:19033517-19033331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr13:45583829-45584019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr13:11565796-11565616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr13:21235712-21235895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 83
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr13:23141832-23141643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:1642027-1642216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:9707790-9707975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:11202000-11201812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:17021767-17021955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
154, 37
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:19427594-19427405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
184, 91
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:24796837-24796656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:24814812-24814624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:31507485-31507670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
142, 77
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:31581777-31581966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:5447514-5447316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:7038295-7038105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:11103240-11103436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 180
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:18098462-18098270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
153, 179
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:28500105-28500295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:40937158-40937344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:48127067-48126874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:49392990-49393181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
180, 145
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr13:6616800-6616993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr13:17845447-17845254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 90
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr13:18877165-18876972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr13:21275818-21275625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
184, 134
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr13:21288126-21288316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
171, 87
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr13:25579231-25579427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr13:40541146-40541340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:1363653-1363455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:2822829-2822637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 120
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:6189641-6189834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
174, 99
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:10220920-10220726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:10408916-10408722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:10511742-10511937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:12045379-12045577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:13954434-13954626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:14063562-14063754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
174, 89
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:16003542-16003735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:16203628-16203434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:18548663-18548469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
176, 146
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:19023889-19024082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:19279054-19278864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:20537578-20537383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:20879865-20880055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:21246750-21246944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:21313715-21313908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:26316927-26317124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:26423010-26422804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:33868378-33868185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:35730720-35730912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:37775248-37775437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:38329575-38329386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
184, 106
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:38334917-38335111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
174, 82
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:45499188-45499004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:49356090-49356281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
178, 89
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:57436432-57436633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:62369627-62369433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 179
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:1791467-1791662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:11543528-11543328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:21129087-21128894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:26044092-26044288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:53357792-53357598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr13:20248476-20248289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr13:37030301-37030116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr13:4158619-4158423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr13:27181000-27180802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr13:45130473-45130276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr13:17611593-17611801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
174, 92
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr13:55775319-55775100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
2-145
               

               
Cow position:
               
chr13:23478988-23478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr13:33974010-33974176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr13:5277092-5276904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr13:26901008-26900816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr13:7059419-7059238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-191
               

               
Cow position:
               
chr13:13088986-13088806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr13:16292498-16292309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr13:19778897-19779055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr13:16163538-16163386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
4-171
               

               
Cow position:
               
chr13:53390495-53390324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr13:48373362-48373529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr13:17994417-17994589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr13:50515145-50515321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr13:48409328-48409146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr13:2340937-2340753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 172
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr13:54128640-54128822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
172, 69
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr13:5263325-5263505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
171, 103
               

               
Conread position:
               
4-193
               

               
Cow position:
               
chr13:30798678-30798481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr13:17498172-17497992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr13:41190061-41189872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr13:61162377-61162177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr13:9108720-9108879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr13:12673340-12673495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr13:20367924-20368099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-193
               

               
Cow position:
               
chr13:26377461-26377650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
8-177
               

               
Cow position:
               
chr13:6972335-6972167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
8-177
               

               
Cow position:
               
chr13:8195050-8194883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chr13:13115817-13115638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chr13:18846355-18846160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
63, 172
               

               
Conread position:
               
9-168
               

               
Cow position:
               
chr13:26847877-26848035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr13:48128889-48129066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr13:390690-390863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
166, 78
               

               
Conread position:
               
11-110
               

               
Cow position:
               
chr13:53309177-53309276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-187
               

               
Cow position:
               
chr13:20261381-20261559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
13-181
               

               
Cow position:
               
chr13:30711172-30711003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
69, 100
               

               
Conread position:
               
13-193
               

               
Cow position:
               
chr13:17787676-17787856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 164
               

               
Conread position:
               
13-194
               

               
Cow position:
               
chr13:19222620-19222444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
13-196
               

               
Cow position:
               
chr13:51695916-51695736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 132
               

               
Conread position:
               
15-165
               

               
Cow position:
               
chr13:6465744-6465884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
15-172
               

               
Cow position:
               
chr13:19610619-19610772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
15-193
               

               
Cow position:
               
chr13:40491160-40490989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
16-106
               

               
Cow position:
               
chr13:6975901-6975991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-130
               

               
Cow position:
               
chr13:37980813-37980925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
16-139
               

               
Cow position:
               
chr13:25547638-25547761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-145
               

               
Cow position:
               
chr13:38071884-38071754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
16-160
               

               
Cow position:
               
chr13:13316630-13316486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-161
               

               
Cow position:
               
chr13:6926461-6926315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
16-161
               

               
Cow position:
               
chr13:15991286-15991428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
16-161
               

               
Cow position:
               
chr13:16714321-16714463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
16-162
               

               
Cow position:
               
chr13:18615328-18615173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
16-163
               

               
Cow position:
               
chr13:8667563-8667416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-163
               

               
Cow position:
               
chr13:15083608-15083462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
16-163
               

               
Cow position:
               
chr13:18995070-18994923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-166
               

               
Cow position:
               
chr13:18340477-18340328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
16-167
               

               
Cow position:
               
chr13:11434631-11434777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
16-167
               

               
Cow position:
               
chr13:41806716-41806573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-168
               

               
Cow position:
               
chr13:17135269-17135419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
16-168
               

               
Cow position:
               
chr13:25978249-25978398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:6377651-6377496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:6974105-6973955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:12670507-12670659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:15192942-15193095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:16525279-16525435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:16908161-16908006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:18166676-18166525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:24585990-24585841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:25926734-25926581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:53850768-53850613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr13:53865580-53865428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
16-174
               

               
Cow position:
               
chr13:10535034-10534878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
16-174
               

               
Cow position:
               
chr13:20288282-20288128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
16-174
               

               
Cow position:
               
chr13:46298812-46298964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
16-176
               

               
Cow position:
               
chr13:35557167-35557323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:14411839-14411678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:17813415-17813258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:19588816-19588655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:19883093-19883247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:21955121-21955283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:25520971-25521137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:28376616-28376775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:37405655-37405502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:37517233-37517400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:42200563-42200407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:53619948-53619787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:54582816-54582661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
16-177
               

               
Cow position:
               
chr13:62008051-62007894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
16-180
               

               
Cow position:
               
chr13:3149487-3149649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
16-181
               

               
Cow position:
               
chr13:6663808-6663973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-181
               

               
Cow position:
               
chr13:16711293-16711130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
149, 72
               

               
Conread position:
               
16-181
               

               
Cow position:
               
chr13:22345330-22345492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 72
               

               
Conread position:
               
16-181
               

               
Cow position:
               
chr13:31398403-31398240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
16-181
               

               
Cow position:
               
chr13:37593002-37593163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
16-184
               

               
Cow position:
               
chr13:2418416-2418582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
16-184
               

               
Cow position:
               
chr13:8425400-8425232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-184
               

               
Cow position:
               
chr13:8637642-8637474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-184
               

               
Cow position:
               
chr13:10522881-10522719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
16-184
               

               
Cow position:
               
chr13:28695804-28695638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
16-184
               

               
Cow position:
               
chr13:42672479-42672650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
16-184
               

               
Cow position:
               
chr13:43480004-43479842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 67
               

               
Conread position:
               
16-184
               

               
Cow position:
               
chr13:47243607-47243774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
16-184
               

               
Cow position:
               
chr13:50646687-50646848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr13:584926-585095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr13:5175541-5175379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr13:22729458-22729627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr13:26395405-26395238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr13:27871717-27871550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr13:37946445-37946606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr13:50715092-50714924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
160, 80
               

               
Conread position:
               
16-185
               

               
Cow position:
               
chr13:55162156-55161989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 105
               

               
Conread position:
               
16-186
               

               
Cow position:
               
chr13:20520259-20520087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
16-186
               

               
Cow position:
               
chr13:20579854-20579696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
16-186
               

               
Cow position:
               
chr13:27198852-27198692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
16-186
               

               
Cow position:
               
chr13:52913817-52913654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:620305-620472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
155, 41
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:1462348-1462515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:21127393-21127564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 135
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:21171628-21171795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:22122656-22122486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:23478846-23478675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
162, 77
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:24160396-24160226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:37344742-37344571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:43576958-43576787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:44003645-44003476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 72
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:45023265-45023446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
16-187
               

               
Cow position:
               
chr13:55674264-55674433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
16-188
               

               
Cow position:
               
chr13:8699793-8699968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-188
               

               
Cow position:
               
chr13:47538216-47538372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
16-190
               

               
Cow position:
               
chr13:52934371-52934206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
16-191
               

               
Cow position:
               
chr13:13320741-13320574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
16-192
               

               
Cow position:
               
chr13:13796867-13797044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
84, 167
               

               
Conread position:
               
16-192
               

               
Cow position:
               
chr13:20378376-20378547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
166, 72
               

               
Conread position:
               
16-192
               

               
Cow position:
               
chr13:52010891-52011072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 170
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr13:13781124-13780948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr13:14351526-14351356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr13:19178122-19177938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr13:26120416-26120593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
155, 32
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr13:33054429-33054602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr13:47675991-47676165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
16-194
               

               
Cow position:
               
chr13:12923821-12923643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 110
               

               
Conread position:
               
16-194
               

               
Cow position:
               
chr13:13338800-13338629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-194
               

               
Cow position:
               
chr13:32017568-32017745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
16-194
               

               
Cow position:
               
chr13:50768543-50768358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
16-194
               

               
Cow position:
               
chr13:54236751-54236581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
16-194
               

               
Cow position:
               
chr13:62238710-62238533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:1339197-1339379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:4417055-4416877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:5659823-5659995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:14644995-14644822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:15993330-15993152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:15996978-15996805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:17823006-17823181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:17975019-17975189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:19248981-19248803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:20137765-20137587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:21024931-21024754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:21057959-21058137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:28605447-28605625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:33518012-33518190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:41157349-41157167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 164
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:55765234-55765406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr13:56034915-56035092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
159, 91
               

               
Conread position:
               
16-196
               

               
Cow position:
               
chr13:15162688-15162868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-196
               

               
Cow position:
               
chr13:17624266-17624085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
143, 49
               

               
Conread position:
               
16-196
               

               
Cow position:
               
chr13:23975223-23975401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
165, 28
               

               
Conread position:
               
16-197
               

               
Cow position:
               
chr13:43342512-43342338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
16-201
               

               
Cow position:
               
chr13:13503460-13503282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
16-203
               

               
Cow position:
               
chr13:21009783-21009583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
16-203
               

               
Cow position:
               
chr13:37985800-37985986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr13:6113582-6113771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
79, 162
               

               
Conread position:
               
16-205
               

               
Cow position:
               
chr13:10727308-10727114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 181
               

               
Conread position:
               
16-206
               

               
Cow position:
               
chr13:62251900-62252089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
180, 68
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr13:9551305-9551109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
170, 91
               

               
Conread position:
               
16-213
               

               
Cow position:
               
chr13:26959853-26960046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
16-236
               

               
Cow position:
               
chr13:23823090-23823301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
17-171
               

               
Cow position:
               
chr13:19393235-19393089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
17-171
               

               
Cow position:
               
chr13:23795444-23795586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
17-171
               

               
Cow position:
               
chr13:25817470-25817322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
17-174
               

               
Cow position:
               
chr13:2776231-2776074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-187
               

               
Cow position:
               
chr13:23805075-23805245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
18-187
               

               
Cow position:
               
chr13:51198753-51198586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
18-193
               

               
Cow position:
               
chr13:42302097-42302272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
166, 47
               

               
Conread position:
               
18-226
               

               
Cow position:
               
chr13:46347076-46346863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
158, 193
               

               
Conread position:
               
19-111
               

               
Cow position:
               
chr13:11643880-11643788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-139
               

               
Cow position:
               
chr13:17716573-17716693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-163
               

               
Cow position:
               
chr13:24372004-24372153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
19-163
               

               
Cow position:
               
chr13:26109944-26109798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
19-166
               

               
Cow position:
               
chr13:4404472-4404332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
19-167
               

               
Cow position:
               
chr13:20217457-20217601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
19-170
               

               
Cow position:
               
chr13:37803832-37803673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
19-171
               

               
Cow position:
               
chr13:9900099-9899939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
19-171
               

               
Cow position:
               
chr13:11231353-11231504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
19-171
               

               
Cow position:
               
chr13:17114438-17114588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
19-171
               

               
Cow position:
               
chr13:21280556-21280708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-171
               

               
Cow position:
               
chr13:28071812-28071670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
19-171
               

               
Cow position:
               
chr13:47651475-47651622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
19-171
               

               
Cow position:
               
chr13:54127886-54128038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
19-173
               

               
Cow position:
               
chr13:1037580-1037427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 75
               

               
Conread position:
               
19-173
               

               
Cow position:
               
chr13:11260216-11260068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
19-174
               

               
Cow position:
               
chr13:10989129-10989284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
19-174
               

               
Cow position:
               
chr13:20509675-20509517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
19-177
               

               
Cow position:
               
chr13:16099180-16099342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
19-177
               

               
Cow position:
               
chr13:24215733-24215890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
19-177
               

               
Cow position:
               
chr13:33875616-33875459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
19-177
               

               
Cow position:
               
chr13:38035779-38035626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
19-179
               

               
Cow position:
               
chr13:13251470-13251628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
153, 41
               

               
Conread position:
               
19-180
               

               
Cow position:
               
chr13:12416693-12416853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
19-180
               

               
Cow position:
               
chr13:17044570-17044409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-180
               

               
Cow position:
               
chr13:52641007-52641167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
19-181
               

               
Cow position:
               
chr13:15872382-15872220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-181
               

               
Cow position:
               
chr13:20174682-20174520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
137, 81
               

               
Conread position:
               
19-181
               

               
Cow position:
               
chr13:50457799-50457634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chr13:18894253-18894091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chr13:20578819-20578653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chr13:21886736-21886902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chr13:49823968-49823802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-185
               

               
Cow position:
               
chr13:49848765-49848928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
19-186
               

               
Cow position:
               
chr13:20844925-20845091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr13:5930364-5930533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 132
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr13:6486306-6486477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr13:16476798-16476631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr13:19364181-19364021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr13:20271284-20271456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr13:22115619-22115452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr13:26291254-26291088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
163, 104
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr13:48597850-48597686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr13:10924980-10925147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr13:26726665-26726834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
19-188
               

               
Cow position:
               
chr13:30258792-30258624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 80
               

               
Conread position:
               
19-189
               

               
Cow position:
               
chr13:971956-972119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
19-189
               

               
Cow position:
               
chr13:8362802-8362974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
19-191
               

               
Cow position:
               
chr13:9124865-9124702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
19-191
               

               
Cow position:
               
chr13:46391296-46391129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chr13:3153691-3153519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chr13:6951520-6951353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chr13:14940742-14940570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chr13:20088774-20088946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
19-192
               

               
Cow position:
               
chr13:20214380-20214206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr13:8537763-8537589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr13:10715804-10715630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
159, 90
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr13:15288980-15289149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
162, 75
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr13:21194845-21195017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
159, 88
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr13:21866692-21866861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr13:49204949-49204783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
19-194
               

               
Cow position:
               
chr13:6861122-6860945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:5758401-5758564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:5825990-5826165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:8522974-8522794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
94, 165
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:10423462-10423291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:18058309-18058476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:20156120-20155943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:37554932-37555107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
160, 69
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:40483038-40483212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
156, 54
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:45352972-45352797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:50142978-50143153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
19-195
               

               
Cow position:
               
chr13:53847180-53847349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
19-196
               

               
Cow position:
               
chr13:369182-369360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
160, 38
               

               
Conread position:
               
19-196
               

               
Cow position:
               
chr13:28587801-28587979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
19-196
               

               
Cow position:
               
chr13:60509179-60509357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
19-197
               

               
Cow position:
               
chr13:36949455-36949637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
19-197
               

               
Cow position:
               
chr13:52894088-52893912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
163, 69
               

               
Conread position:
               
19-198
               

               
Cow position:
               
chr13:21269641-21269814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
19-198
               

               
Cow position:
               
chr13:30315448-30315269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 166
               

               
Conread position:
               
19-200
               

               
Cow position:
               
chr13:21170467-21170291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
153, 88
               

               
Conread position:
               
19-201
               

               
Cow position:
               
chr13:10096596-10096777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
19-201
               

               
Cow position:
               
chr13:26100330-26100152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
19-204
               

               
Cow position:
               
chr13:24094373-24094553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
19-207
               

               
Cow position:
               
chr13:17979043-17979228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
20-151
               

               
Cow position:
               
chr13:13932231-13932362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-162
               

               
Cow position:
               
chr13:12185666-12185807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
20-170
               

               
Cow position:
               
chr13:38280470-38280320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-171
               

               
Cow position:
               
chr13:13775303-13775460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
20-171
               

               
Cow position:
               
chr13:19223595-19223444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-177
               

               
Cow position:
               
chr13:13533725-13533875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
20-177
               

               
Cow position:
               
chr13:28081662-28081503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
20-180
               

               
Cow position:
               
chr13:25941323-25941478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
20-183
               

               
Cow position:
               
chr13:24107608-24107765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
20-184
               

               
Cow position:
               
chr13:20784530-20784373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
155, 68
               

               
Conread position:
               
20-184
               

               
Cow position:
               
chr13:51080586-51080424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
20-185
               

               
Cow position:
               
chr13:34532992-34533150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
20-187
               

               
Cow position:
               
chr13:13478737-13478904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-187
               

               
Cow position:
               
chr13:22046071-22046235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
20-187
               

               
Cow position:
               
chr13:23399706-23399543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
20-189
               

               
Cow position:
               
chr13:14796149-14795981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
20-192
               

               
Cow position:
               
chr13:11719036-11719210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
20-192
               

               
Cow position:
               
chr13:14927200-14927036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
20-194
               

               
Cow position:
               
chr13:43811880-43811701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 160
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr13:20698343-20698516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
146, 121
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr13:29957965-29957775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr13:45428923-45429097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
20-195
               

               
Cow position:
               
chr13:57770046-57770216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
165, 68
               

               
Conread position:
               
20-199
               

               
Cow position:
               
chr13:55081082-55080903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 54
               

               
Conread position:
               
21-177
               

               
Cow position:
               
chr13:17437917-17438075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
21-185
               

               
Cow position:
               
chr13:55457380-55457217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
21-187
               

               
Cow position:
               
chr13:30148624-30148780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
149, 76
               

               
Conread position:
               
22-163
               

               
Cow position:
               
chr13:18929467-18929326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-174
               

               
Cow position:
               
chr13:17958777-17958630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
23-163
               

               
Cow position:
               
chr13:10055358-10055217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
23-163
               

               
Cow position:
               
chr13:26261851-26261991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-163
               

               
Cow position:
               
chr13:51128135-51128275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-169
               

               
Cow position:
               
chr13:52027200-52027341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
118, 74
               

               
Conread position:
               
23-171
               

               
Cow position:
               
chr13:8682392-8682244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-171
               

               
Cow position:
               
chr13:25313212-25313356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
23-171
               

               
Cow position:
               
chr13:38396094-38395947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
23-171
               

               
Cow position:
               
chr13:46525489-46525636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
23-176
               

               
Cow position:
               
chr13:24155451-24155296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
23-177
               

               
Cow position:
               
chr13:14967274-14967428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
23-177
               

               
Cow position:
               
chr13:22941996-22942150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-181
               

               
Cow position:
               
chr13:55007835-55007987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
23-184
               

               
Cow position:
               
chr13:23436792-23436630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
23-185
               

               
Cow position:
               
chr13:12876038-12876197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
23-186
               

               
Cow position:
               
chr13:56019057-56019219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
23-188
               

               
Cow position:
               
chr13:11439090-11439245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
23-191
               

               
Cow position:
               
chr13:44278285-44278122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
23-193
               

               
Cow position:
               
chr13:1347229-1347397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
23-193
               

               
Cow position:
               
chr13:7097523-7097360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
23-193
               

               
Cow position:
               
chr13:20854519-20854689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
23-194
               

               
Cow position:
               
chr13:14782279-14782118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
23-195
               

               
Cow position:
               
chr13:10986564-10986734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 148
               

               
Conread position:
               
23-195
               

               
Cow position:
               
chr13:11410651-11410475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
23-195
               

               
Cow position:
               
chr13:29579561-29579734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
159, 73
               

               
Conread position:
               
23-195
               

               
Cow position:
               
chr13:37069282-37069114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
23-196
               

               
Cow position:
               
chr13:10279862-10279688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
156, 129
               

               
Conread position:
               
23-201
               

               
Cow position:
               
chr13:27027965-27028142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
23-205
               

               
Cow position:
               
chr13:39347288-39347465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
24-128
               

               
Cow position:
               
chr13:55266353-55266249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-168
               

               
Cow position:
               
chr13:6442169-6442311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
24-169
               

               
Cow position:
               
chr13:61001782-61001637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-171
               

               
Cow position:
               
chr13:20497582-20497435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-176
               

               
Cow position:
               
chr13:23214954-23214801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
24-177
               

               
Cow position:
               
chr13:13504331-13504484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-177
               

               
Cow position:
               
chr13:15114407-15114254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-177
               

               
Cow position:
               
chr13:52477711-52477858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
24-180
               

               
Cow position:
               
chr13:4790182-4790339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
24-180
               

               
Cow position:
               
chr13:9906667-9906512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
24-180
               

               
Cow position:
               
chr13:15822479-15822323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-186
               

               
Cow position:
               
chr13:29507553-29507388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
24-188
               

               
Cow position:
               
chr13:10102608-10102783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
24-188
               

               
Cow position:
               
chr13:18197672-18197831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 55
               

               
Conread position:
               
24-192
               

               
Cow position:
               
chr13:5279266-5279437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
138, 155
               

               
Conread position:
               
24-192
               

               
Cow position:
               
chr13:51107055-51106896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
24-194
               

               
Cow position:
               
chr13:32283064-32282895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
160, 128
               

               
Conread position:
               
24-195
               

               
Cow position:
               
chr13:4981164-4980993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
153, 96
               

               
Conread position:
               
24-195
               

               
Cow position:
               
chr13:20789581-20789749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
24-197
               

               
Cow position:
               
chr13:4954482-4954307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
152, 38
               

               
Conread position:
               
24-204
               

               
Cow position:
               
chr13:17158942-17159121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
25-177
               

               
Cow position:
               
chr13:1170397-1170245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-194
               

               
Cow position:
               
chr13:28536382-28536550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
25-194
               

               
Cow position:
               
chr13:35659695-35659525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 153
               

               
Conread position:
               
25-194
               

               
Cow position:
               
chr13:57848262-57848093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-168
               

               
Cow position:
               
chr13:48370367-48370504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
26-177
               

               
Cow position:
               
chr13:45593855-45593710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
26-186
               

               
Cow position:
               
chr13:29665955-29665794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
26-187
               

               
Cow position:
               
chr13:15257433-15257590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-187
               

               
Cow position:
               
chr13:15869048-15868885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
26-188
               

               
Cow position:
               
chr13:58157123-58157283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
26-192
               

               
Cow position:
               
chr13:29805083-29805243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
158, 91
               

               
Conread position:
               
26-194
               

               
Cow position:
               
chr13:8367652-8367489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
26-195
               

               
Cow position:
               
chr13:2529016-2529187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
153, 62
               

               
Conread position:
               
26-195
               

               
Cow position:
               
chr13:2776794-2776625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
148, 142
               

               
Conread position:
               
26-195
               

               
Cow position:
               
chr13:3387854-3388023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-195
               

               
Cow position:
               
chr13:11700375-11700207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
26-195
               

               
Cow position:
               
chr13:18814678-18814508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 145
               

               
Conread position:
               
26-195
               

               
Cow position:
               
chr13:46111903-46111735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
27-184
               

               
Cow position:
               
chr13:242568-242412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
27-186
               

               
Cow position:
               
chr13:13283276-13283116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
27-186
               

               
Cow position:
               
chr13:57002659-57002500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
27-191
               

               
Cow position:
               
chr13:33256434-33256267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
27-209
               

               
Cow position:
               
chr13:20893707-20893888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
28-127
               

               
Cow position:
               
chr13:37503651-37503749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
28-167
               

               
Cow position:
               
chr13:24591529-24591391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
28-181
               

               
Cow position:
               
chr13:20042328-20042481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-192
               

               
Cow position:
               
chr13:9702392-9702229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
28-195
               

               
Cow position:
               
chr13:10390003-10390172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
159, 95
               

               
Conread position:
               
29-163
               

               
Cow position:
               
chr13:8423336-8423202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-173
               

               
Cow position:
               
chr13:47186164-47186021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
29-176
               

               
Cow position:
               
chr13:4507165-4507013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
29-177
               

               
Cow position:
               
chr13:39775552-39775703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
29-186
               

               
Cow position:
               
chr13:18062099-18061942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-195
               

               
Cow position:
               
chr13:55327372-55327207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
155, 24
               

               
Conread position:
               
30-186
               

               
Cow position:
               
chr13:34393061-34393212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
31-171
               

               
Cow position:
               
chr13:6997082-6996947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
31-193
               

               
Cow position:
               
chr13:19376303-19376140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 150
               

               
Conread position:
               
31-194
               

               
Cow position:
               
chr13:8230084-8229924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
32-163
               

               
Cow position:
               
chr13:19470611-19470742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
32-165
               

               
Cow position:
               
chr13:20090440-20090568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
34-176
               

               
Cow position:
               
chr13:21070935-21070792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
34-186
               

               
Cow position:
               
chr13:24759405-24759567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
35-193
               

               
Cow position:
               
chr13:19308648-19308805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr13:16718428-16718579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
36-192
               

               
Cow position:
               
chr13:45439455-45439304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
37-193
               

               
Cow position:
               
chr13:27146747-27146591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
39-180
               

               
Cow position:
               
chr13:43577911-43577771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
39-189
               

               
Cow position:
               
chr13:19182749-19182896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
146, 52
               

               
Conread position:
               
40-195
               

               
Cow position:
               
chr13:23680732-23680577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-195
               

               
Cow position:
               
chr13:9587662-9587812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
44-196
               

               
Cow position:
               
chr13:52929351-52929199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-184
               

               
Cow position:
               
chr13:7568738-7568875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
47-176
               

               
Cow position:
               
chr13:56958894-56958764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
47-177
               

               
Cow position:
               
chr13:30809460-30809588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
47-196
               

               
Cow position:
               
chr13:19294573-19294424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
50-176
               

               
Cow position:
               
chr13:20795294-20795419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
51-188
               

               
Cow position:
               
chr13:26482870-26483008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
52-177
               

               
Cow position:
               
chr13:9800431-9800308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
53-187
               

               
Cow position:
               
chr13:47340237-47340100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
53-199
               

               
Cow position:
               
chr13:30396626-30396486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
55-185
               

               
Cow position:
               
chr13:1643978-1644112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
61-177
               

               
Cow position:
               
chr13:18875035-18874919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-193
               

               
Cow position:
               
chr13:25380847-25380712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
62-197
               

               
Cow position:
               
chr13:17980788-17980650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
68-202
               

               
Cow position:
               
chr13:4622209-4622076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
79-194
               

               
Cow position:
               
chr13:20653977-20654091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               
Show alignments to all cow chromosomes.