Cow genome map

Conread name: OvF2-UMC-pd0fol-011-c09

Conread position: 230-404
Cow position: chr12:6241201-6241378 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 232-404
Cow position: chr12:47804045-47804215 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 235-400
Cow position: chr12:5714518-5714684 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 135

Conread position: 235-404
Cow position: chr12:30210370-30210542 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 240-404
Cow position: chr12:25805238-25805073 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 78

Conread position: 242-404
Cow position: chr12:5940239-5940400 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 35

Conread position: 247-404
Cow position: chr12:4866721-4866876 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 247-404
Cow position: chr12:45783809-45783657 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 35

Conread position: 255-404
Cow position: chr12:11836147-11836293 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 260-404
Cow position: chr12:33851278-33851416 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 263-402
Cow position: chr12:24273440-24273300 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 22

Conread position: 263-404
Cow position: chr12:18766054-18765914 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 264-402
Cow position: chr12:1333150-1333288 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 265-404
Cow position: chr12:26151543-26151402 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 80

Conread position: 266-404
Cow position: chr12:33319749-33319609 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 266-404
Cow position: chr12:37170025-37169887 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 20

Conread position: 267-404
Cow position: chr12:24116444-24116304 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 44

Conread position: 268-404
Cow position: chr12:4797220-4797359 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 268-404
Cow position: chr12:30819167-30819303 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 269-404
Cow position: chr12:17881786-17881920 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 270-400
Cow position: chr12:45039034-45039165 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 11

Conread position: 270-403
Cow position: chr12:6410808-6410676 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 91, 10

Conread position: 270-404
Cow position: chr12:31517246-31517112 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 272-404
Cow position: chr12:18577764-18577899 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 273-386
Cow position: chr12:22285193-22285081 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 273-402
Cow position: chr12:17001185-17001315 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 273-404
Cow position: chr12:24663040-24663173 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 273-404
Cow position: chr12:45820440-45820307 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 274-404
Cow position: chr12:5635524-5635394 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 8

Conread position: 274-404
Cow position: chr12:18388363-18388232 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 105

Conread position: 275-404
Cow position: chr12:7110127-7110256 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 276-402
Cow position: chr12:37514349-37514224 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 110
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 276-404
Cow position: chr12:7902873-7902740 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 9

Conread position: 276-404
Cow position: chr12:25177664-25177539 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 277-402
Cow position: chr12:16670200-16670323 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 277-404
Cow position: chr12:30605234-30605107 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 7, 92

Conread position: 277-404
Cow position: chr12:33948836-33948963 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 277-404
Cow position: chr12:46120901-46120773 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 8

Conread position: 278-403
Cow position: chr12:42879625-42879752 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 280-382
Cow position: chr12:18550816-18550918 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 5

Conread position: 280-399
Cow position: chr12:30170604-30170723 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 105
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 52

Conread position: 280-402
Cow position: chr12:15089452-15089572 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 280-402
Cow position: chr12:17252262-17252142 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 280-403
Cow position: chr12:24167008-24166886 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 6, 0

Conread position: 280-403
Cow position: chr12:39465515-39465637 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:5554398-5554275 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 280-404
Cow position: chr12:5905991-5906115 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 280-404
Cow position: chr12:6485274-6485154 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:6720260-6720387 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 280-404
Cow position: chr12:7884746-7884622 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 280-404
Cow position: chr12:11056811-11056935 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 6

Conread position: 280-404
Cow position: chr12:11659864-11659980 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:15260699-15260821 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 108
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:15703561-15703439 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:17879365-17879243 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:18123605-18123728 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 111
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:19274461-19274340 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:19502492-19502369 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:24032432-24032555 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:27037515-27037391 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 280-404
Cow position: chr12:29770636-29770520 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr12:36544707-36544583 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 8

Conread position: 280-404
Cow position: chr12:45092382-45092505 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 281-404
Cow position: chr12:7311316-7311440 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 281-404
Cow position: chr12:44203048-44202928 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 282-394
Cow position: chr12:15240801-15240685 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 282-404
Cow position: chr12:18518610-18518732 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 106
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 283-394
Cow position: chr12:6235225-6235338 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 283-402
Cow position: chr12:19507575-19507694 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 105
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 283-404
Cow position: chr12:15122263-15122385 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 13

Conread position: 283-404
Cow position: chr12:15530996-15531113 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 283-404
Cow position: chr12:15641170-15641048 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 283-404
Cow position: chr12:17269740-17269861 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 285-403
Cow position: chr12:32169481-32169598 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 285-404
Cow position: chr12:9143328-9143446 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 285-404
Cow position: chr12:9766937-9766818 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 285-404
Cow position: chr12:25561310-25561428 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 288-402
Cow position: chr12:19261138-19261252 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr12:15429653-15429537 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr12:19691288-19691175 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 288-404
Cow position: chr12:26575839-26575955 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr12:27357331-27357446 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 102
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 290-393
Cow position: chr12:45168074-45167971 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 290-404
Cow position: chr12:36994171-36994057 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 290-404
Cow position: chr12:42181184-42181070 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 292-403
Cow position: chr12:36261636-36261747 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 292-404
Cow position: chr12:3092633-3092521 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 292-404
Cow position: chr12:18583045-18582934 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 294-404
Cow position: chr12:1766861-1766968 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 295-404
Cow position: chr12:2734958-2734849 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 295-404
Cow position: chr12:32714996-32715103 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 298-404
Cow position: chr12:24437682-24437576 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 299-404
Cow position: chr12:23714628-23714734 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 300-400
Cow position: chr12:19513070-19512970 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 300-404
Cow position: chr12:14986704-14986808 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 300-404
Cow position: chr12:48578798-48578902 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 303-404
Cow position: chr12:27572282-27572181 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 89
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 305-404
Cow position: chr12:29731274-29731373 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 309-403
Cow position: chr12:6480604-6480698 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 313-404
Cow position: chr12:29316494-29316402 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.