Cow genome map

Conread name: OvF2-UMC-pd0fol-011-c09

Conread position: 234-404
Cow position: chr14:16457635-16457465 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 81

Conread position: 235-404
Cow position: chr14:23478936-23478772 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 55

Conread position: 238-404
Cow position: chr14:33644067-33643905 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 239-404
Cow position: chr14:10852138-10851976 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 41

Conread position: 241-404
Cow position: chr14:46998150-46997984 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 33

Conread position: 251-401
Cow position: chr14:13731001-13731152 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 34

Conread position: 254-404
Cow position: chr14:4848441-4848293 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 27

Conread position: 257-401
Cow position: chr14:40191678-40191541 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 20

Conread position: 258-404
Cow position: chr14:22941636-22941783 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 260-404
Cow position: chr14:20110635-20110777 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 263-404
Cow position: chr14:24945406-24945547 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 126, 21

Conread position: 265-404
Cow position: chr14:1431749-1431884 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 265-404
Cow position: chr14:23682350-23682207 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 32, 17

Conread position: 265-404
Cow position: chr14:40165507-40165370 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 266-404
Cow position: chr14:19189128-19188988 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 267-404
Cow position: chr14:26442261-26442395 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 268-404
Cow position: chr14:40208980-40208841 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 269-401
Cow position: chr14:21933261-21933395 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 270-404
Cow position: chr14:18302041-18301905 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 272-404
Cow position: chr14:18309230-18309362 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 274-404
Cow position: chr14:1646112-1646239 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 113, 10

Conread position: 274-404
Cow position: chr14:19372413-19372284 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 274-404
Cow position: chr14:42154899-42155026 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 275-403
Cow position: chr14:33300776-33300650 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 275-404
Cow position: chr14:8784269-8784146 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 275-404
Cow position: chr14:10706950-10706821 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 53

Conread position: 275-404
Cow position: chr14:38338061-38338188 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 276-404
Cow position: chr14:12924374-12924244 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 51, 9

Conread position: 277-384
Cow position: chr14:3162798-3162692 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 277-404
Cow position: chr14:25903602-25903476 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 109
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 278-401
Cow position: chr14:11729037-11729162 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 279-382
Cow position: chr14:24758118-24758014 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 279-404
Cow position: chr14:5557052-5557176 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 280-385
Cow position: chr14:2345135-2345031 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 94
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 280-388
Cow position: chr14:41325378-41325486 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 94
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 280-400
Cow position: chr14:13846054-13845934 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 280-403
Cow position: chr14:8750139-8750023 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 280-403
Cow position: chr14:33714611-33714727 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr14:2833336-2833460 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 280-404
Cow position: chr14:3194924-3194811 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr14:9308297-9308175 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr14:10078336-10078213 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 111
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr14:11643188-11643304 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr14:12033173-12033289 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr14:15997697-15997820 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 280-404
Cow position: chr14:16524541-16524412 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 5

Conread position: 280-404
Cow position: chr14:16549934-16550058 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 280-404
Cow position: chr14:16760467-16760344 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 5

Conread position: 280-404
Cow position: chr14:19359957-19359833 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 10

Conread position: 280-404
Cow position: chr14:20640562-20640684 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr14:24913944-24913821 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr14:26433173-26433297 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 280-404
Cow position: chr14:27591889-27592011 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr14:29698290-29698416 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 5

Conread position: 280-404
Cow position: chr14:36254628-36254751 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 280-404
Cow position: chr14:41837804-41837927 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 282-393
Cow position: chr14:20349662-20349770 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 282-399
Cow position: chr14:42480150-42480267 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 24

Conread position: 282-403
Cow position: chr14:34083093-34083219 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 282-404
Cow position: chr14:4282442-4282561 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 282-404
Cow position: chr14:19487362-19487240 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 282-404
Cow position: chr14:25334126-25334004 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 282-404
Cow position: chr14:33751602-33751483 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 282-404
Cow position: chr14:41749693-41749814 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 283-402
Cow position: chr14:48838661-48838542 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 283-403
Cow position: chr14:41486196-41486313 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 283-404
Cow position: chr14:20826556-20826436 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 284-404
Cow position: chr14:24416947-24416822 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 285-395
Cow position: chr14:24796369-24796480 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 285-402
Cow position: chr14:2038744-2038861 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 107
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 285-404
Cow position: chr14:2570961-2571080 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 285-404
Cow position: chr14:11577132-11577015 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 286-404
Cow position: chr14:45677293-45677175 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 6, 31

Conread position: 288-401
Cow position: chr14:10631058-10631171 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 288-402
Cow position: chr14:5633879-5633998 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 288-404
Cow position: chr14:15054930-15055046 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr14:16256827-16256704 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 288-404
Cow position: chr14:22989094-22988979 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 288-404
Cow position: chr14:25225789-25225673 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr14:47170293-47170408 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 289-404
Cow position: chr14:41210915-41210799 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 67

Conread position: 289-404
Cow position: chr14:45577032-45577147 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 290-403
Cow position: chr14:21535247-21535360 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 290-404
Cow position: chr14:4991061-4990947 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 290-404
Cow position: chr14:28115128-28115241 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 92

Conread position: 290-404
Cow position: chr14:35018694-35018808 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 100
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 291-401
Cow position: chr14:39774994-39775102 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 291-404
Cow position: chr14:39778810-39778697 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 292-403
Cow position: chr14:2981614-2981724 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 292-404
Cow position: chr14:15469925-15470036 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 292-404
Cow position: chr14:29734307-29734419 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 294-404
Cow position: chr14:34096512-34096620 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 47

Conread position: 295-402
Cow position: chr14:40287646-40287539 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.