Cow genome map

Conread name: OvF2-UMC-pd0fol-011-c09

Conread position: 226-404
Cow position: chr20:26077708-26077528 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 10

Conread position: 235-404
Cow position: chr20:36779757-36779589 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 250-404
Cow position: chr20:14759680-14759525 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 260-402
Cow position: chr20:28982699-28982838 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 266-404
Cow position: chr20:11359629-11359492 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 46

Conread position: 269-404
Cow position: chr20:40177251-40177385 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 270-401
Cow position: chr20:33532308-33532440 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 9

Conread position: 271-404
Cow position: chr20:40157908-40158040 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 272-404
Cow position: chr20:5702730-5702864 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 272-404
Cow position: chr20:28605216-28605349 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 72

Conread position: 273-390
Cow position: chr20:15548886-15548770 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 273-401
Cow position: chr20:11542276-11542150 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 21

Conread position: 273-404
Cow position: chr20:8817480-8817351 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 112
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 273-404
Cow position: chr20:15529869-15530000 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 111
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 82

Conread position: 273-404
Cow position: chr20:23846655-23846524 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 12

Conread position: 274-404
Cow position: chr20:17100374-17100502 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 274-404
Cow position: chr20:23792614-23792744 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 275-404
Cow position: chr20:13752235-13752365 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 10

Conread position: 275-404
Cow position: chr20:15766123-15766251 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 10

Conread position: 276-402
Cow position: chr20:30888042-30888173 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 277-401
Cow position: chr20:7426184-7426060 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 277-404
Cow position: chr20:22235320-22235452 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 277-404
Cow position: chr20:25162112-25161985 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 13

Conread position: 277-404
Cow position: chr20:38768446-38768323 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 278-401
Cow position: chr20:39269071-39268948 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 280-370
Cow position: chr20:35354805-35354715 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 5

Conread position: 280-387
Cow position: chr20:3606943-3606838 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 280-396
Cow position: chr20:19459648-19459533 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 280-398
Cow position: chr20:8308037-8308151 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 280-402
Cow position: chr20:25009616-25009494 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 26

Conread position: 280-402
Cow position: chr20:32847361-32847483 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 280-403
Cow position: chr20:8702898-8702772 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 5

Conread position: 280-403
Cow position: chr20:12239664-12239544 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 25, 5

Conread position: 280-403
Cow position: chr20:19363345-19363224 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 109
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 6, 0

Conread position: 280-403
Cow position: chr20:22000017-22000141 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 5

Conread position: 280-404
Cow position: chr20:2298769-2298650 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr20:3148701-3148824 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr20:4786993-4786878 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr20:7438834-7438711 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr20:7756606-7756485 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 280-404
Cow position: chr20:8547085-8547206 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 5

Conread position: 280-404
Cow position: chr20:8556251-8556129 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 280-404
Cow position: chr20:8578265-8578389 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 280-404
Cow position: chr20:10208825-10208948 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 5

Conread position: 280-404
Cow position: chr20:12420601-12420479 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr20:21815578-21815701 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 111
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr20:22265229-22265112 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr20:35445087-35444963 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 280-404
Cow position: chr20:36207824-36207954 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 113
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 280-404
Cow position: chr20:38089930-38090053 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 107
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr20:39266939-39266818 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr20:39398497-39398621 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 281-404
Cow position: chr20:7738214-7738091 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 282-385
Cow position: chr20:26723660-26723557 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 282-404
Cow position: chr20:26996545-26996669 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 105

Conread position: 282-404
Cow position: chr20:38514797-38514918 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 110
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 0

Conread position: 283-404
Cow position: chr20:8912480-8912358 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 285-403
Cow position: chr20:20203239-20203357 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 285-404
Cow position: chr20:7624227-7624105 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 285-404
Cow position: chr20:14806908-14807027 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 285-404
Cow position: chr20:20158157-20158276 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 104
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 285-404
Cow position: chr20:22030343-22030460 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 285-404
Cow position: chr20:28441348-28441467 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 285-404
Cow position: chr20:33363539-33363658 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 285-404
Cow position: chr20:39212557-39212441 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 286-401
Cow position: chr20:398284-398169 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr20:3255061-3255177 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 25

Conread position: 288-404
Cow position: chr20:21204382-21204493 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 288-404
Cow position: chr20:22978351-22978467 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr20:24097025-24097141 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr20:39155439-39155553 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 289-403
Cow position: chr20:35710199-35710315 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 289-404
Cow position: chr20:3564185-3564296 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 289-404
Cow position: chr20:6358645-6358760 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 290-404
Cow position: chr20:580894-580780 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 290-404
Cow position: chr20:2169695-2169583 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 290-404
Cow position: chr20:10818214-10818100 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 290-404
Cow position: chr20:14620277-14620161 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 290-404
Cow position: chr20:19751333-19751447 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 290-404
Cow position: chr20:23678691-23678575 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 291-404
Cow position: chr20:10772233-10772345 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 292-400
Cow position: chr20:1009678-1009570 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 292-401
Cow position: chr20:36312480-36312371 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 292-402
Cow position: chr20:24069834-24069944 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 292-404
Cow position: chr20:32463492-32463384 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 292-404
Cow position: chr20:32866158-32866054 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 292-404
Cow position: chr20:38670778-38670890 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 293-404
Cow position: chr20:9412517-9412628 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 294-401
Cow position: chr20:12581924-12581817 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 94
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 294-404
Cow position: chr20:5078657-5078767 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 296-403
Cow position: chr20:24315001-24314895 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 297-404
Cow position: chr20:11043439-11043334 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 299-404
Cow position: chr20:19636141-19636036 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 303-404
Cow position: chr20:26041059-26040958 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 88
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 303-404
Cow position: chr20:26905713-26905815 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 306-404
Cow position: chr20:19834788-19834690 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 314-404
Cow position: chr20:20590251-20590161 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 80
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 317-403
Cow position: chr20:21535680-21535594 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 75
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.