Cow genome map

Conread name: OvF2-UMC-pd0fol-011-c09

Conread position: 218-404
Cow position: chr29:32197607-32197792 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 18

Conread position: 230-402
Cow position: chr29:10235207-10235041 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 53

Conread position: 254-404
Cow position: chr29:22735159-22735013 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 260-404
Cow position: chr29:5186541-5186398 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 264-404
Cow position: chr29:9310552-9310695 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 85

Conread position: 265-404
Cow position: chr29:732574-732712 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 94

Conread position: 265-404
Cow position: chr29:11053902-11053765 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 269-402
Cow position: chr29:40633607-40633735 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 269-404
Cow position: chr29:34359019-34358883 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 272-404
Cow position: chr29:9709658-9709790 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 13

Conread position: 274-404
Cow position: chr29:41112913-41112786 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 275-404
Cow position: chr29:28840124-28840251 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 277-402
Cow position: chr29:34687804-34687928 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 277-404
Cow position: chr29:5788997-5789123 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 277-404
Cow position: chr29:22028985-22028860 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 8

Conread position: 277-404
Cow position: chr29:31200227-31200353 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 280-395
Cow position: chr29:14445073-14444959 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 280-399
Cow position: chr29:7624151-7624268 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 280-400
Cow position: chr29:5520513-5520394 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 280-400
Cow position: chr29:31943837-31943959 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 280-402
Cow position: chr29:26615748-26615624 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 5

Conread position: 280-403
Cow position: chr29:17109932-17110051 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 280-403
Cow position: chr29:41811615-41811496 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr29:4874911-4874785 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 5

Conread position: 280-404
Cow position: chr29:5098794-5098671 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 280-404
Cow position: chr29:5892817-5892940 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr29:20770319-20770439 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr29:20903313-20903195 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr29:21285332-21285454 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr29:22167106-22166983 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr29:23243905-23243783 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 109
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr29:23825240-23825115 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 280-404
Cow position: chr29:26540568-26540445 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr29:30681738-30681616 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 280-404
Cow position: chr29:35501682-35501559 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 280-404
Cow position: chr29:40117543-40117666 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 281-403
Cow position: chr29:39329631-39329509 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 282-404
Cow position: chr29:5063118-5063240 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 282-404
Cow position: chr29:10058562-10058443 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 282-404
Cow position: chr29:23983982-23983860 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 282-404
Cow position: chr29:30918524-30918644 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 283-403
Cow position: chr29:19949283-19949401 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 64

Conread position: 283-403
Cow position: chr29:22162275-22162155 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 105
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 283-404
Cow position: chr29:10156327-10156211 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 283-404
Cow position: chr29:18012532-18012653 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 283-404
Cow position: chr29:29324446-29324331 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 283-404
Cow position: chr29:36217089-36217207 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 284-373
Cow position: chr29:31477140-31477049 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 284-399
Cow position: chr29:39111336-39111222 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 284-403
Cow position: chr29:742674-742555 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 284-404
Cow position: chr29:23220524-23220406 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 285-400
Cow position: chr29:36530843-36530958 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 285-403
Cow position: chr29:17804511-17804628 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 285-404
Cow position: chr29:22723577-22723696 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 105
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 285-404
Cow position: chr29:29769375-29769256 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 62

Conread position: 285-404
Cow position: chr29:45005651-45005534 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 286-404
Cow position: chr29:39038292-39038174 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 288-403
Cow position: chr29:24578842-24578957 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 102
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 288-403
Cow position: chr29:25737435-25737320 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 105
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 288-403
Cow position: chr29:27329872-27329986 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 288-404
Cow position: chr29:12680135-12680251 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr29:18085551-18085667 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr29:23155207-23155321 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 101
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 288-404
Cow position: chr29:30548755-30548871 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 288-404
Cow position: chr29:32211087-32210976 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 288-404
Cow position: chr29:38978511-38978625 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 289-404
Cow position: chr29:8926481-8926366 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 289-404
Cow position: chr29:11527809-11527697 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 290-402
Cow position: chr29:29176634-29176524 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 290-404
Cow position: chr29:12625995-12625881 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 290-404
Cow position: chr29:17154760-17154873 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 290-404
Cow position: chr29:24624231-24624343 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 290-404
Cow position: chr29:31928970-31929082 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 291-404
Cow position: chr29:4520322-4520431 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 291-404
Cow position: chr29:9378619-9378732 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-404
Cow position: chr29:40873995-40874106 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 295-404
Cow position: chr29:7290762-7290871 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 295-404
Cow position: chr29:29308586-29308476 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 296-399
Cow position: chr29:40903162-40903265 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 296-404
Cow position: chr29:36781317-36781209 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 94
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 298-404
Cow position: chr29:19363700-19363805 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 300-402
Cow position: chr29:8125368-8125258 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 301-404
Cow position: chr29:19125314-19125417 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-404
Cow position: chr29:15797947-15798047 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 316-404
Cow position: chr29:17022157-17022245 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.