Cow genome map
| Conread name: | OvF2-UMC-pd0fol-011-f12 |
| Conread position: | 38-295 |
| Cow position: | chr1:26406884-26406633 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 116 |
| Conread position: | 88-274 |
| Cow position: | chr1:92758567-92758374 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 88-297 |
| Cow position: | chr1:98246194-98246404 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 89-186 |
| Cow position: | chr1:4044725-4044822 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 89-268 |
| Cow position: | chr1:102531865-102532046 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 89-276 |
| Cow position: | chr1:5192348-5192168 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 93, 12 |
| Conread position: | 89-281 |
| Cow position: | chr1:17488344-17488151 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 89-283 |
| Cow position: | chr1:52394223-52394042 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 89-283 |
| Cow position: | chr1:87946744-87946550 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 89-297 |
| Cow position: | chr1:49739069-49739265 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 191, 56 |
| Conread position: | 89-297 |
| Cow position: | chr1:79743294-79743505 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 89-297 |
| Cow position: | chr1:92612382-92612592 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 58, 77 |
| Conread position: | 89-297 |
| Cow position: | chr1:102459884-102460091 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 90-297 |
| Cow position: | chr1:42182393-42182603 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 91-277 |
| Cow position: | chr1:68530616-68530804 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 91-278 |
| Cow position: | chr1:32350749-32350567 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 92-278 |
| Cow position: | chr1:100754006-100753821 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 92-283 |
| Cow position: | chr1:12040483-12040661 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 96-242 |
| Cow position: | chr1:95425876-95425728 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 99-283 |
| Cow position: | chr1:6714596-6714417 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 152, 121 |
| Conread position: | 121-297 |
| Cow position: | chr1:97509846-97510022 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 164, 146 |
| Conread position: | 141-283 |
| Cow position: | chr1:39506797-39506654 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 147-297 |
| Cow position: | chr1:82515997-82516150 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 133, 0 |
Show alignments to all cow chromosomes.