Cow genome map

Conread name: OvF4-UMC-p4mm3-001-a05

Conread position: 1-184
Cow position: chr18:11313016-11312839 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 35

Conread position: 1-212
Cow position: chr18:48451981-48452198 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-220
Cow position: chr18:34834416-34834636 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 158, 18

Conread position: 1-228
Cow position: chr18:12270422-12270661 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 24

Conread position: 1-228
Cow position: chr18:22180862-22180632 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 119

Conread position: 1-241
Cow position: chr18:2146665-2146430 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 18

Conread position: 1-246
Cow position: chr18:25598319-25598067 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 46

Conread position: 3-228
Cow position: chr18:52251936-52251705 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 165, 45

Conread position: 4-183
Cow position: chr18:52413888-52414063 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 4-228
Cow position: chr18:6470007-6470241 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 4-228
Cow position: chr18:10576028-10576252 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 14

Conread position: 5-234
Cow position: chr18:33896501-33896259 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 42

Conread position: 6-228
Cow position: chr18:11790848-11791067 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 13

Conread position: 6-228
Cow position: chr18:19765104-19765335 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 24

Conread position: 6-247
Cow position: chr18:50359251-50359496 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 62, 15

Conread position: 7-216
Cow position: chr18:14225313-14225527 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 10

Conread position: 8-226
Cow position: chr18:3209643-3209866 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 134

Conread position: 8-227
Cow position: chr18:12113445-12113220 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 47

Conread position: 9-228
Cow position: chr18:22516612-22516387 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 29

Conread position: 10-228
Cow position: chr18:12242200-12242426 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 28

Conread position: 10-228
Cow position: chr18:42432164-42431943 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 56, 37

Conread position: 10-228
Cow position: chr18:51643441-51643220 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 20

Conread position: 10-229
Cow position: chr18:44262552-44262773 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 14

Conread position: 12-164
Cow position: chr18:53038753-53038910 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 30

Conread position: 13-177
Cow position: chr18:30794351-30794516 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 8

Conread position: 13-228
Cow position: chr18:11691484-11691257 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 16

Conread position: 13-228
Cow position: chr18:20126230-20126441 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 92

Conread position: 13-228
Cow position: chr18:33299828-33300034 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 16

Conread position: 17-228
Cow position: chr18:55505334-55505552 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 52, 83

Conread position: 17-245
Cow position: chr18:15517241-15517008 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 21

Conread position: 18-178
Cow position: chr18:36201699-36201537 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 55

Conread position: 18-181
Cow position: chr18:47705161-47705329 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 11

Conread position: 18-228
Cow position: chr18:22790161-22789941 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 46

Conread position: 18-228
Cow position: chr18:43797027-43796810 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 19-228
Cow position: chr18:4495957-4495741 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 191

Conread position: 19-228
Cow position: chr18:15613929-15613715 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 22

Conread position: 19-252
Cow position: chr18:48633712-48633938 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 66

Conread position: 19-253
Cow position: chr18:34219995-34219732 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 20-157
Cow position: chr18:14888225-14888361 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 23

Conread position: 20-226
Cow position: chr18:56181531-56181312 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 118

Conread position: 21-162
Cow position: chr18:5711720-5711578 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 40

Conread position: 21-163
Cow position: chr18:45570942-45571088 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 87

Conread position: 21-182
Cow position: chr18:16686396-16686240 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 21-183
Cow position: chr18:46727517-46727684 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 132

Conread position: 21-183
Cow position: chr18:51392711-51392547 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 50

Conread position: 21-184
Cow position: chr18:19896520-19896352 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 83

Conread position: 21-184
Cow position: chr18:39875329-39875163 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 30

Conread position: 21-217
Cow position: chr18:46452952-46452746 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 21-228
Cow position: chr18:10891446-10891660 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 82

Conread position: 21-228
Cow position: chr18:18919027-18918814 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 82

Conread position: 21-228
Cow position: chr18:19193436-19193223 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 21-228
Cow position: chr18:20174199-20173988 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 152

Conread position: 21-228
Cow position: chr18:23630671-23630466 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 20

Conread position: 21-228
Cow position: chr18:24719243-24719457 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 21-228
Cow position: chr18:38985620-38985840 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 8, 158

Conread position: 21-228
Cow position: chr18:42290388-42290185 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 142, 24

Conread position: 21-228
Cow position: chr18:42293116-42292913 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 142, 24

Conread position: 21-228
Cow position: chr18:49017433-49017632 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 10, 51

Conread position: 21-228
Cow position: chr18:51594874-51594668 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 149

Conread position: 21-228
Cow position: chr18:51757025-51757243 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 105

Conread position: 21-230
Cow position: chr18:28657977-28657764 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 15

Conread position: 21-245
Cow position: chr18:42431683-42431449 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 178

Conread position: 21-247
Cow position: chr18:30586293-30586070 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 65

Conread position: 21-247
Cow position: chr18:51691534-51691301 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 217

Conread position: 21-253
Cow position: chr18:29648714-29648957 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 123

Conread position: 22-228
Cow position: chr18:11578009-11578206 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 16

Conread position: 22-235
Cow position: chr18:31711635-31711421 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 140

Conread position: 23-164
Cow position: chr18:19619876-19620018 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 16

Conread position: 23-173
Cow position: chr18:56183864-56184021 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 23-178
Cow position: chr18:45637478-45637325 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 16

Conread position: 23-184
Cow position: chr18:16997185-16997351 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 23-187
Cow position: chr18:43020471-43020300 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 23-228
Cow position: chr18:25006562-25006357 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 145

Conread position: 23-244
Cow position: chr18:48242122-48242345 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 43

Conread position: 23-245
Cow position: chr18:36768878-36768649 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 69

Conread position: 23-249
Cow position: chr18:35367262-35367035 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 9, 63

Conread position: 23-252
Cow position: chr18:43014929-43014699 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 47

Conread position: 24-228
Cow position: chr18:30360216-30359994 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 9, 19

Conread position: 24-228
Cow position: chr18:45903962-45903747 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 13, 69

Conread position: 25-226
Cow position: chr18:29356690-29356486 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 132

Conread position: 25-228
Cow position: chr18:3180344-3180559 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 25-228
Cow position: chr18:12023702-12023490 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 116

Conread position: 25-228
Cow position: chr18:19849820-19849622 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 51

Conread position: 25-228
Cow position: chr18:22569133-22568919 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 187

Conread position: 25-228
Cow position: chr18:47565762-47565964 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 43, 70

Conread position: 25-244
Cow position: chr18:23821893-23821665 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 15

Conread position: 25-248
Cow position: chr18:46647221-46646993 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 58

Conread position: 25-253
Cow position: chr18:47485981-47486224 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 17

Conread position: 25-253
Cow position: chr18:49038396-49038631 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 16, 214

Conread position: 26-164
Cow position: chr18:4539947-4539805 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 26-226
Cow position: chr18:47693000-47693201 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 149

Conread position: 26-234
Cow position: chr18:14586535-14586324 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 9

Conread position: 27-220
Cow position: chr18:47125463-47125272 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 144

Conread position: 27-253
Cow position: chr18:47824833-47824592 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 65

Conread position: 29-158
Cow position: chr18:41511566-41511432 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 20

Conread position: 29-228
Cow position: chr18:24759719-24759510 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 30-175
Cow position: chr18:35889157-35889012 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 40

Conread position: 30-182
Cow position: chr18:46072401-46072558 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 30-228
Cow position: chr18:7965170-7965381 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 30-228
Cow position: chr18:19868320-19868109 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 52

Conread position: 30-228
Cow position: chr18:47525346-47525541 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 141

Conread position: 30-228
Cow position: chr18:50382191-50382399 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 42

Conread position: 30-237
Cow position: chr18:39001865-39001656 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 68

Conread position: 30-253
Cow position: chr18:12273596-12273827 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 182

Conread position: 30-253
Cow position: chr18:42427559-42427793 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 176

Conread position: 31-232
Cow position: chr18:52877301-52877498 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 132

Conread position: 35-228
Cow position: chr18:8949850-8949650 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 100

Conread position: 35-228
Cow position: chr18:31672566-31672369 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 14

Conread position: 35-228
Cow position: chr18:44917701-44917903 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 8, 166

Conread position: 35-228
Cow position: chr18:48713495-48713691 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 132

Conread position: 35-228
Cow position: chr18:51383451-51383249 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 22

Conread position: 38-164
Cow position: chr18:21740867-21740738 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 38-178
Cow position: chr18:28923899-28923754 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 38-228
Cow position: chr18:9365867-9366071 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 38-228
Cow position: chr18:38601937-38601736 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 39-161
Cow position: chr18:16378872-16378997 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 39-162
Cow position: chr18:11684931-11685057 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 39-164
Cow position: chr18:17660611-17660483 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 39-164
Cow position: chr18:50082308-50082180 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 39-173
Cow position: chr18:21081942-21081806 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 62

Conread position: 39-180
Cow position: chr18:38687033-38687173 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 44

Conread position: 39-183
Cow position: chr18:47548037-47547889 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 102

Conread position: 39-184
Cow position: chr18:9176852-9176996 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 38

Conread position: 39-185
Cow position: chr18:23505280-23505431 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 39-208
Cow position: chr18:29958215-29958045 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 96

Conread position: 39-216
Cow position: chr18:10977261-10977076 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 146
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 39-224
Cow position: chr18:28930687-28930496 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 39-228
Cow position: chr18:1399401-1399203 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 124, 35

Conread position: 39-228
Cow position: chr18:1954640-1954431 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chr18:2773443-2773238 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chr18:2776946-2776741 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chr18:8171136-8170942 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 39-228
Cow position: chr18:9089649-9089840 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 166

Conread position: 39-228
Cow position: chr18:17391044-17390841 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 71

Conread position: 39-228
Cow position: chr18:20462746-20462558 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 126

Conread position: 39-228
Cow position: chr18:20641547-20641352 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 39-228
Cow position: chr18:31082399-31082194 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chr18:38937771-38937969 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 18

Conread position: 39-228
Cow position: chr18:49100419-49100236 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 121

Conread position: 39-228
Cow position: chr18:49841231-49841432 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 31, 44

Conread position: 39-228
Cow position: chr18:52649398-52649190 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chr18:55119821-55120016 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 187

Conread position: 39-234
Cow position: chr18:10904799-10905002 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 39-236
Cow position: chr18:9974379-9974175 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 31, 115

Conread position: 39-250
Cow position: chr18:47183344-47183141 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 123

Conread position: 39-252
Cow position: chr18:49015078-49015291 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 145, 35

Conread position: 39-253
Cow position: chr18:32189558-32189340 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 182

Conread position: 40-183
Cow position: chr18:24342792-24342938 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 136

Conread position: 41-228
Cow position: chr18:2794020-2793827 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 41-228
Cow position: chr18:41950160-41950362 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 41-228
Cow position: chr18:55499023-55499219 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 82

Conread position: 42-163
Cow position: chr18:44801937-44801813 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 42-171
Cow position: chr18:44523040-44523171 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 42-183
Cow position: chr18:2765205-2765345 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 12

Conread position: 42-187
Cow position: chr18:55000789-55000642 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 28, 80

Conread position: 42-199
Cow position: chr18:49324481-49324317 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 57

Conread position: 42-212
Cow position: chr18:47511958-47512131 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 28, 132

Conread position: 42-226
Cow position: chr18:18843966-18844158 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 28, 64

Conread position: 42-228
Cow position: chr18:49981487-49981309 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 118

Conread position: 42-228
Cow position: chr18:50632490-50632296 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 28, 118

Conread position: 42-241
Cow position: chr18:35535194-35534988 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 27, 185

Conread position: 42-243
Cow position: chr18:1571283-1571076 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 200

Conread position: 42-253
Cow position: chr18:28101586-28101802 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 89

Conread position: 43-228
Cow position: chr18:4152602-4152404 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 43-228
Cow position: chr18:9010659-9010854 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 8, 0

Conread position: 43-228
Cow position: chr18:12117895-12117704 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 26, 53

Conread position: 43-228
Cow position: chr18:18592426-18592613 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 155
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 123

Conread position: 43-241
Cow position: chr18:247735-247535 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 27, 40

Conread position: 43-241
Cow position: chr18:11779606-11779815 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 43-247
Cow position: chr18:15809847-15809640 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 58

Conread position: 44-183
Cow position: chr18:18369405-18369266 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 108

Conread position: 44-186
Cow position: chr18:23162847-23162983 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 44-226
Cow position: chr18:26938937-26939119 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 150

Conread position: 44-226
Cow position: chr18:49655639-49655828 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 97

Conread position: 44-228
Cow position: chr18:4556212-4556015 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 57

Conread position: 44-228
Cow position: chr18:5632222-5632414 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 44-228
Cow position: chr18:15172964-15173153 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 23, 181

Conread position: 44-228
Cow position: chr18:30341226-30341033 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 124, 30

Conread position: 44-228
Cow position: chr18:37189340-37189143 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 44-228
Cow position: chr18:45558101-45558292 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 26, 0

Conread position: 44-228
Cow position: chr18:46048706-46048903 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 44-229
Cow position: chr18:42747546-42747748 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 39

Conread position: 44-243
Cow position: chr18:9066652-9066864 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 44-244
Cow position: chr18:39168486-39168688 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 53

Conread position: 44-245
Cow position: chr18:51192786-51192582 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 181

Conread position: 44-253
Cow position: chr18:5766367-5766581 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 39

Conread position: 45-226
Cow position: chr18:53642793-53642603 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 64

Conread position: 45-228
Cow position: chr18:5647768-5647957 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 46-228
Cow position: chr18:31557204-31557008 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 46-228
Cow position: chr18:51405950-51405768 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 83

Conread position: 49-180
Cow position: chr18:45985666-45985531 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 49-183
Cow position: chr18:11672002-11672138 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 62

Conread position: 49-183
Cow position: chr18:21768578-21768711 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 21

Conread position: 49-208
Cow position: chr18:912144-911985 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 34

Conread position: 49-226
Cow position: chr18:11867296-11867485 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 49-226
Cow position: chr18:33158902-33159090 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 49-227
Cow position: chr18:12058962-12059142 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 22

Conread position: 49-228
Cow position: chr18:4851520-4851336 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 34

Conread position: 49-228
Cow position: chr18:9846451-9846270 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 118

Conread position: 49-239
Cow position: chr18:40047539-40047344 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 68

Conread position: 50-228
Cow position: chr18:6075435-6075259 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 119

Conread position: 50-243
Cow position: chr18:29474704-29474901 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 20, 75

Conread position: 51-178
Cow position: chr18:47410504-47410634 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 51-228
Cow position: chr18:42479625-42479431 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 51-252
Cow position: chr18:24531767-24531570 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 20

Conread position: 53-228
Cow position: chr18:4489945-4489752 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 53-228
Cow position: chr18:20057140-20057317 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 168

Conread position: 53-248
Cow position: chr18:48407702-48407909 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 187

Conread position: 54-244
Cow position: chr18:32243764-32243576 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 16, 37

Conread position: 55-246
Cow position: chr18:41724853-41724648 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 15, 180

Conread position: 56-228
Cow position: chr18:29065417-29065243 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 64

Conread position: 56-228
Cow position: chr18:35786022-35786202 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 57-228
Cow position: chr18:9596151-9596326 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 19, 8

Conread position: 57-228
Cow position: chr18:47802123-47801947 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 35

Conread position: 57-253
Cow position: chr18:41702804-41703011 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 34

Conread position: 59-228
Cow position: chr18:47868579-47868745 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 38

Conread position: 60-226
Cow position: chr18:28322627-28322800 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 96

Conread position: 61-228
Cow position: chr18:34444762-34444588 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 30

Conread position: 62-220
Cow position: chr18:21664736-21664581 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 141, 0

Conread position: 62-242
Cow position: chr18:29390220-29390038 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 13

Conread position: 67-215
Cow position: chr18:32290690-32290842 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 67-228
Cow position: chr18:50263944-50263781 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 12

Conread position: 67-228
Cow position: chr18:51867565-51867407 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 151, 23

Conread position: 68-183
Cow position: chr18:42715334-42715217 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 68-228
Cow position: chr18:44548766-44548597 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 68-247
Cow position: chr18:4485578-4485767 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 68-248
Cow position: chr18:12143971-12143779 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 73-178
Cow position: chr18:49197405-49197510 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 73-212
Cow position: chr18:50018747-50018605 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 73-227
Cow position: chr18:17195359-17195198 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 73-228
Cow position: chr18:5189707-5189542 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 88, 132

Conread position: 73-228
Cow position: chr18:19831570-19831724 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 7, 19

Conread position: 73-228
Cow position: chr18:35582052-35581904 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 148, 88

Conread position: 73-228
Cow position: chr18:45897716-45897876 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 75

Conread position: 73-228
Cow position: chr18:49603057-49602893 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 73-245
Cow position: chr18:21187292-21187464 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 91

Conread position: 73-247
Cow position: chr18:23447075-23446888 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 73-247
Cow position: chr18:24022604-24022783 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 73-253
Cow position: chr18:47872027-47872206 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 36

Conread position: 74-177
Cow position: chr18:23027182-23027079 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 74-207
Cow position: chr18:23921715-23921579 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 5

Conread position: 74-226
Cow position: chr18:19809695-19809536 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 74-228
Cow position: chr18:50004719-50004557 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 75-225
Cow position: chr18:43125074-43125222 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 81, 47

Conread position: 77-212
Cow position: chr18:43400725-43400590 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 77-246
Cow position: chr18:44206095-44205924 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 153

Conread position: 78-228
Cow position: chr18:9818759-9818912 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 80-228
Cow position: chr18:49440834-49440992 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 81-253
Cow position: chr18:47419793-47419969 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 87, 60

Conread position: 82-241
Cow position: chr18:55722496-55722662 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 82-246
Cow position: chr18:35857929-35857758 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 161

Conread position: 83-228
Cow position: chr18:11856897-11857045 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 83-228
Cow position: chr18:21143968-21143819 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 84-209
Cow position: chr18:54974010-54973882 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 84-210
Cow position: chr18:81969-82101 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 84-228
Cow position: chr18:11434750-11434901 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 87-228
Cow position: chr18:38228407-38228549 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 134, 0

Conread position: 87-228
Cow position: chr18:47096429-47096572 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 79, 134

Conread position: 88-228
Cow position: chr18:36501077-36500933 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 70, 91

Conread position: 91-228
Cow position: chr18:3132766-3132624 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 92-249
Cow position: chr18:10758050-10757888 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 74, 149

Conread position: 94-228
Cow position: chr18:12056673-12056545 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 127, 16

Conread position: 97-253
Cow position: chr18:17007470-17007307 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 111

Conread position: 99-228
Cow position: chr18:29091750-29091877 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 51

Conread position: 100-253
Cow position: chr18:18597070-18596914 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 81

Conread position: 101-228
Cow position: chr18:4907161-4907293 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 124

Conread position: 101-228
Cow position: chr18:47680528-47680659 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 21

Conread position: 101-228
Cow position: chr18:47865085-47865216 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 21

Conread position: 108-228
Cow position: chr18:16417474-16417348 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 28

Conread position: 119-228
Cow position: chr18:18520769-18520652 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 123-234
Cow position: chr18:11814340-11814454 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.