Cow genome map
| Conread name: | OvF4-UMC-p4mm3-001-a05 |
| Conread position: | 1-177 |
| Cow position: | chr28:11752182-11752011 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 1-206 |
| Cow position: | chr28:5193281-5193491 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 1-228 |
| Cow position: | chr28:4884303-4884066 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 69, 29 |
| Conread position: | 1-228 |
| Cow position: | chr28:5139036-5138812 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 1-228 |
| Cow position: | chr28:24082223-24082457 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 4-173 |
| Cow position: | chr28:3169232-3169067 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 4-225 |
| Cow position: | chr28:3143922-3143702 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 4-228 |
| Cow position: | chr28:22500536-22500319 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 179, 24 |
| Conread position: | 5-228 |
| Cow position: | chr28:5437123-5436899 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 161, 13 |
| Conread position: | 6-228 |
| Cow position: | chr28:3411027-3410802 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 7-228 |
| Cow position: | chr28:5630052-5630286 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 8-238 |
| Cow position: | chr28:16211139-16210904 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 10-183 |
| Cow position: | chr28:7498186-7498011 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 10-226 |
| Cow position: | chr28:26743589-26743816 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 10-228 |
| Cow position: | chr28:4834883-4834656 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 10-228 |
| Cow position: | chr28:11079270-11079487 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 10-228 |
| Cow position: | chr28:21844919-21845138 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 10-242 |
| Cow position: | chr28:14998028-14998266 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 10-247 |
| Cow position: | chr28:25128847-25129088 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 11-227 |
| Cow position: | chr28:12991103-12991321 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 12-215 |
| Cow position: | chr28:30937704-30937505 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 12-228 |
| Cow position: | chr28:7619187-7618973 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 12-249 |
| Cow position: | chr28:19262626-19262373 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 13-253 |
| Cow position: | chr28:34133824-34134065 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 71, 15 |
| Conread position: | 14-224 |
| Cow position: | chr28:11527296-11527076 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 90 |
| Conread position: | 14-246 |
| Cow position: | chr28:11426577-11426335 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 17-228 |
| Cow position: | chr28:30327124-30326914 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 77 |
| Conread position: | 18-226 |
| Cow position: | chr28:26614837-26615038 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 150 |
| Conread position: | 18-228 |
| Cow position: | chr28:4006754-4006968 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 19-181 |
| Cow position: | chr28:27161362-27161195 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 106 |
| Conread position: | 19-228 |
| Cow position: | chr28:6091326-6091543 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 20-175 |
| Cow position: | chr28:34248062-34247903 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 20-226 |
| Cow position: | chr28:3492817-3492602 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 21-164 |
| Cow position: | chr28:7865294-7865444 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 21-180 |
| Cow position: | chr28:15043896-15043731 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 6, 84 |
| Conread position: | 21-181 |
| Cow position: | chr28:20759734-20759568 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 103 |
| Conread position: | 21-184 |
| Cow position: | chr28:4823574-4823738 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 21-191 |
| Cow position: | chr28:32174597-32174772 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 21-212 |
| Cow position: | chr28:4881269-4881073 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 21-227 |
| Cow position: | chr28:11884552-11884345 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 21-228 |
| Cow position: | chr28:4045815-4046031 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 21-228 |
| Cow position: | chr28:4070935-4071145 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 21-228 |
| Cow position: | chr28:4181970-4182188 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 21-228 |
| Cow position: | chr28:4282522-4282302 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 21-228 |
| Cow position: | chr28:11346510-11346302 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 151, 27 |
| Conread position: | 21-228 |
| Cow position: | chr28:11866699-11866481 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 21-228 |
| Cow position: | chr28:20397403-20397179 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 21-229 |
| Cow position: | chr28:31841378-31841159 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 21-245 |
| Cow position: | chr28:13474268-13474502 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 18, 225 |
| Conread position: | 21-252 |
| Cow position: | chr28:4016499-4016742 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 22-228 |
| Cow position: | chr28:4013051-4013270 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 22-228 |
| Cow position: | chr28:24966355-24966573 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 22-241 |
| Cow position: | chr28:3740843-3741068 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 14, 212 |
| Conread position: | 22-253 |
| Cow position: | chr28:1099691-1099465 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 23-164 |
| Cow position: | chr28:11348393-11348537 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 23-220 |
| Cow position: | chr28:11585234-11585031 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 23-226 |
| Cow position: | chr28:12951393-12951601 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 32 |
| Conread position: | 23-228 |
| Cow position: | chr28:5144549-5144327 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 23-228 |
| Cow position: | chr28:26531308-26531094 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 126 |
| Conread position: | 23-240 |
| Cow position: | chr28:5817809-5818037 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-241 |
| Cow position: | chr28:2279619-2279402 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 23-241 |
| Cow position: | chr28:7009006-7008778 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 23-244 |
| Cow position: | chr28:19564261-19564033 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 7, 141 |
| Conread position: | 23-245 |
| Cow position: | chr28:23410354-23410131 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 47, 146 |
| Conread position: | 23-249 |
| Cow position: | chr28:3746166-3746408 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 23-250 |
| Cow position: | chr28:24343341-24343564 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 24-219 |
| Cow position: | chr28:3445511-3445303 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 24-228 |
| Cow position: | chr28:9684363-9684150 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 24-241 |
| Cow position: | chr28:11816697-11816481 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 148 |
| Conread position: | 25-178 |
| Cow position: | chr28:10172444-10172288 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 25-182 |
| Cow position: | chr28:8149660-8149501 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 145 |
| Conread position: | 25-182 |
| Cow position: | chr28:33052005-33052169 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 136 |
| Conread position: | 25-183 |
| Cow position: | chr28:32179670-32179828 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 25-228 |
| Cow position: | chr28:2762166-2762359 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 138 |
| Conread position: | 25-228 |
| Cow position: | chr28:8787513-8787726 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 97 |
| Conread position: | 25-228 |
| Cow position: | chr28:16214900-16214698 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 29-228 |
| Cow position: | chr28:21868433-21868644 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 29-228 |
| Cow position: | chr28:26719318-26719517 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 148 |
| Conread position: | 30-164 |
| Cow position: | chr28:26922392-26922253 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 30-178 |
| Cow position: | chr28:10775736-10775581 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 30-182 |
| Cow position: | chr28:21355208-21355364 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 30-184 |
| Cow position: | chr28:7388791-7388637 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 13, 69 |
| Conread position: | 30-212 |
| Cow position: | chr28:11422836-11422645 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 30-228 |
| Cow position: | chr28:4090077-4089872 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 30-228 |
| Cow position: | chr28:17739802-17740012 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 50 |
| Conread position: | 30-249 |
| Cow position: | chr28:4185883-4186114 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 35-178 |
| Cow position: | chr28:12070219-12070360 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 24 |
| Conread position: | 35-181 |
| Cow position: | chr28:22148032-22147882 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 127 |
| Conread position: | 35-228 |
| Cow position: | chr28:11016389-11016591 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 7, 102 |
| Conread position: | 35-253 |
| Cow position: | chr28:6975223-6975447 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 38-159 |
| Cow position: | chr28:5128743-5128618 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 38-183 |
| Cow position: | chr28:2960845-2960697 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 132 |
| Conread position: | 38-187 |
| Cow position: | chr28:6971362-6971210 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 38-228 |
| Cow position: | chr28:3914702-3914892 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 31, 132 |
| Conread position: | 38-228 |
| Cow position: | chr28:7350640-7350837 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 32, 184 |
| Conread position: | 38-228 |
| Cow position: | chr28:9740452-9740645 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 150 |
| Conread position: | 38-232 |
| Cow position: | chr28:5231924-5232128 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 38-246 |
| Cow position: | chr28:8396321-8396533 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 32, 165 |
| Conread position: | 38-253 |
| Cow position: | chr28:24646579-24646798 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 32, 198 |
| Conread position: | 39-158 |
| Cow position: | chr28:2862855-2862977 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 39-178 |
| Cow position: | chr28:4158942-4159084 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 39-182 |
| Cow position: | chr28:8022115-8021971 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 39-212 |
| Cow position: | chr28:5204182-5204360 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 39-215 |
| Cow position: | chr28:4809766-4809948 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 39-216 |
| Cow position: | chr28:11987161-11987340 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 39-216 |
| Cow position: | chr28:12055399-12055578 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 39-220 |
| Cow position: | chr28:777662-777854 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 39-228 |
| Cow position: | chr28:4101507-4101699 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 30, 159 |
| Conread position: | 39-228 |
| Cow position: | chr28:5074520-5074334 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 96 |
| Conread position: | 39-228 |
| Cow position: | chr28:5205258-5205438 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 35, 123 |
| Conread position: | 39-228 |
| Cow position: | chr28:5254861-5255058 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 39-228 |
| Cow position: | chr28:7132100-7131904 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 39-228 |
| Cow position: | chr28:8140469-8140671 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 186 |
| Conread position: | 39-228 |
| Cow position: | chr28:8304234-8304429 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 39-228 |
| Cow position: | chr28:10589034-10588846 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 39-228 |
| Cow position: | chr28:10977828-10978025 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 112 |
| Conread position: | 39-228 |
| Cow position: | chr28:11828969-11828772 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 39-228 |
| Cow position: | chr28:16346544-16346351 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 39-228 |
| Cow position: | chr28:16370096-16369902 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 39-228 |
| Cow position: | chr28:20124771-20124968 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 151 |
| Conread position: | 39-240 |
| Cow position: | chr28:4938800-4938993 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 39-249 |
| Cow position: | chr28:3023926-3023704 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 39-249 |
| Cow position: | chr28:9285383-9285165 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 129, 29 |
| Conread position: | 39-252 |
| Cow position: | chr28:29416729-29416506 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 31, 55 |
| Conread position: | 39-253 |
| Cow position: | chr28:9636470-9636242 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 39-253 |
| Cow position: | chr28:29850828-29850607 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 31, 178 |
| Conread position: | 40-226 |
| Cow position: | chr28:5235869-5236059 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 40-228 |
| Cow position: | chr28:24996625-24996431 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 41-228 |
| Cow position: | chr28:19039030-19038831 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 42-160 |
| Cow position: | chr28:3147472-3147590 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 42-164 |
| Cow position: | chr28:12619565-12619689 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 90 |
| Conread position: | 42-182 |
| Cow position: | chr28:25249344-25249487 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 42-228 |
| Cow position: | chr28:5712011-5711824 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 120, 9 |
| Conread position: | 42-228 |
| Cow position: | chr28:8347721-8347921 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 42-228 |
| Cow position: | chr28:9705643-9705843 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 27, 49 |
| Conread position: | 42-228 |
| Cow position: | chr28:10964413-10964593 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 179, 32 |
| Conread position: | 42-228 |
| Cow position: | chr28:11059491-11059678 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 105 |
| Conread position: | 42-228 |
| Cow position: | chr28:22813252-22813435 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 142, 32 |
| Conread position: | 42-234 |
| Cow position: | chr28:26982748-26982543 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 42-238 |
| Cow position: | chr28:3397207-3397011 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 42-253 |
| Cow position: | chr28:7927167-7927380 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 43-212 |
| Cow position: | chr28:10863793-10863625 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 125, 26 |
| Conread position: | 43-226 |
| Cow position: | chr28:7557743-7557545 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 43-228 |
| Cow position: | chr28:5805662-5805849 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 43-228 |
| Cow position: | chr28:16919177-16918987 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 43-228 |
| Cow position: | chr28:25056957-25057143 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 89 |
| Conread position: | 43-249 |
| Cow position: | chr28:2131933-2131731 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 44-169 |
| Cow position: | chr28:32365836-32365963 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 112 |
| Conread position: | 44-178 |
| Cow position: | chr28:2898981-2899118 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 44-183 |
| Cow position: | chr28:19026013-19025865 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 44-187 |
| Cow position: | chr28:5867719-5867860 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 21 |
| Conread position: | 44-211 |
| Cow position: | chr28:3408226-3408053 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 44-227 |
| Cow position: | chr28:32358100-32358290 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 44-228 |
| Cow position: | chr28:6563906-6563707 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 44-228 |
| Cow position: | chr28:8291421-8291600 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 44-228 |
| Cow position: | chr28:10615954-10615763 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 183 |
| Conread position: | 44-228 |
| Cow position: | chr28:17680614-17680812 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 44-241 |
| Cow position: | chr28:12430598-12430808 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 44-241 |
| Cow position: | chr28:18797312-18797510 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 44-249 |
| Cow position: | chr28:20313269-20313476 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 44-252 |
| Cow position: | chr28:2819767-2819979 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 185 |
| Conread position: | 45-168 |
| Cow position: | chr28:18591264-18591389 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 45-182 |
| Cow position: | chr28:17601561-17601421 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 45-228 |
| Cow position: | chr28:17728106-17727925 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 45-247 |
| Cow position: | chr28:7267950-7267743 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 25, 46 |
| Conread position: | 45-252 |
| Cow position: | chr28:17949120-17948903 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 45-253 |
| Cow position: | chr28:33884395-33884619 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 46-172 |
| Cow position: | chr28:25675511-25675383 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 117 |
| Conread position: | 46-228 |
| Cow position: | chr28:16879567-16879755 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 49-218 |
| Cow position: | chr28:27429028-27429202 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 49-228 |
| Cow position: | chr28:5684700-5684887 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 49-228 |
| Cow position: | chr28:19216819-19216999 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 119 |
| Conread position: | 49-249 |
| Cow position: | chr28:30902123-30902332 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 50-242 |
| Cow position: | chr28:9384289-9384088 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 51-184 |
| Cow position: | chr28:4355547-4355681 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 51-197 |
| Cow position: | chr28:25596630-25596778 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 51-235 |
| Cow position: | chr28:662105-662294 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 127 |
| Conread position: | 52-221 |
| Cow position: | chr28:4876443-4876617 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 52-224 |
| Cow position: | chr28:30746730-30746555 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 133 |
| Conread position: | 54-183 |
| Cow position: | chr28:6059468-6059336 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 55-183 |
| Cow position: | chr28:4051201-4051336 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 57-204 |
| Cow position: | chr28:10212422-10212266 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 57-228 |
| Cow position: | chr28:10891300-10891139 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 58-228 |
| Cow position: | chr28:9109222-9109398 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 10, 93 |
| Conread position: | 58-228 |
| Cow position: | chr28:20046559-20046729 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 59-246 |
| Cow position: | chr28:16681365-16681549 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 128, 22 |
| Conread position: | 60-249 |
| Cow position: | chr28:10890727-10890533 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 62-228 |
| Cow position: | chr28:21008651-21008484 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 13 |
| Conread position: | 63-228 |
| Cow position: | chr28:3678376-3678546 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 63-244 |
| Cow position: | chr28:26868134-26867948 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 65-189 |
| Cow position: | chr28:3246278-3246402 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 101, 9 |
| Conread position: | 65-228 |
| Cow position: | chr28:8681412-8681250 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 156, 17 |
| Conread position: | 66-228 |
| Cow position: | chr28:7964661-7964491 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 70-228 |
| Cow position: | chr28:11305614-11305448 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 73-227 |
| Cow position: | chr28:10203143-10203298 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 73-228 |
| Cow position: | chr28:2777554-2777717 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 73-228 |
| Cow position: | chr28:10958826-10958986 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 73-228 |
| Cow position: | chr28:29989086-29988922 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 73-228 |
| Cow position: | chr28:32014808-32014972 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 73-229 |
| Cow position: | chr28:4022697-4022863 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 73-240 |
| Cow position: | chr28:11411510-11411340 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 73-253 |
| Cow position: | chr28:12933706-12933521 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 149 |
| Conread position: | 74-228 |
| Cow position: | chr28:3726184-3726021 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 74-228 |
| Cow position: | chr28:13269752-13269905 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 147, 92 |
| Conread position: | 74-252 |
| Cow position: | chr28:4027437-4027255 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 75-183 |
| Cow position: | chr28:8258850-8258958 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 97 |
| Conread position: | 76-228 |
| Cow position: | chr28:8936177-8936335 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 79-246 |
| Cow position: | chr28:26530836-26530659 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 79-253 |
| Cow position: | chr28:10762925-10763104 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 83-228 |
| Cow position: | chr28:17943764-17943911 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 139 |
| Conread position: | 86-226 |
| Cow position: | chr28:8516146-8516005 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 86-244 |
| Cow position: | chr28:26960872-26960711 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 71 |
| Conread position: | 91-199 |
| Cow position: | chr28:24726395-24726283 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 91-228 |
| Cow position: | chr28:26574452-26574587 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 101 |
| Conread position: | 94-228 |
| Cow position: | chr28:4866528-4866391 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 97-252 |
| Cow position: | chr28:2435984-2435825 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 50 |
| Conread position: | 99-206 |
| Cow position: | chr28:22371616-22371508 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 99-253 |
| Cow position: | chr28:24238427-24238264 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 69, 84 |
| Conread position: | 100-227 |
| Cow position: | chr28:4100708-4100578 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 110 |
| Conread position: | 100-228 |
| Cow position: | chr28:2737467-2737340 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 73 |
| Conread position: | 100-247 |
| Cow position: | chr28:9069939-9070089 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 135 |
| Conread position: | 101-241 |
| Cow position: | chr28:4588370-4588517 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 105-226 |
| Cow position: | chr28:7750960-7750836 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 109-234 |
| Cow position: | chr28:16177314-16177443 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 116 |
| Conread position: | 136-253 |
| Cow position: | chr28:4375536-4375413 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 136-253 |
| Cow position: | chr28:21673158-21673277 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.