• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
OvF4-UMC-p4mm3-001-a05
        

               
Conread position:
               
1-169
               

               
Cow position:
               
chr29:6015076-6015239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr29:22167128-22166908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
168, 47
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr29:22613380-22613602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
180, 47
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr29:44139292-44139064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
162, 16
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr29:43099792-43099568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr29:17297090-17297319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr29:8163880-8163646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr29:35677591-35677360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr29:5788977-5789187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr29:7624130-7624346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr29:5892797-5893027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
8-212
               

               
Cow position:
               
chr29:32176634-32176832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
8-228
               

               
Cow position:
               
chr29:4070577-4070801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
9-158
               

               
Cow position:
               
chr29:18012512-18012660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr29:27329850-27329994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
10-207
               

               
Cow position:
               
chr29:23220545-23220350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
10-252
               

               
Cow position:
               
chr29:30548730-30548979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr29:10058581-10058362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 28
               

               
Conread position:
               
12-226
               

               
Cow position:
               
chr29:43328600-43328811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
13-235
               

               
Cow position:
               
chr29:22720689-22720459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
14-216
               

               
Cow position:
               
chr29:25737460-25737248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
14-226
               

               
Cow position:
               
chr29:31651365-31651581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
18-238
               

               
Cow position:
               
chr29:10653300-10653511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
19-228
               

               
Cow position:
               
chr29:501159-501381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 197
               

               
Conread position:
               
19-248
               

               
Cow position:
               
chr29:43441532-43441303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
21-163
               

               
Cow position:
               
chr29:41811626-41811483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
21-182
               

               
Cow position:
               
chr29:30918508-30918675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
21-183
               

               
Cow position:
               
chr29:31200216-31200386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
21-193
               

               
Cow position:
               
chr29:26559282-26559108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
21-224
               

               
Cow position:
               
chr29:29057141-29057353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
21-226
               

               
Cow position:
               
chr29:11434082-11434291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
21-226
               

               
Cow position:
               
chr29:29923608-29923397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
21-228
               

               
Cow position:
               
chr29:12680121-12680339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
21-228
               

               
Cow position:
               
chr29:36952335-36952131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
21-228
               

               
Cow position:
               
chr29:41530809-41531032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
9, 133
               

               
Conread position:
               
21-241
               

               
Cow position:
               
chr29:31943825-31944063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
22-183
               

               
Cow position:
               
chr29:40299059-40298891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
22-228
               

               
Cow position:
               
chr29:26778844-26779057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
22-228
               

               
Cow position:
               
chr29:28197046-28196839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
22-235
               

               
Cow position:
               
chr29:42364056-42363831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 132
               

               
Conread position:
               
24-153
               

               
Cow position:
               
chr29:23983993-23983858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
24-171
               

               
Cow position:
               
chr29:23155197-23155341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
25-182
               

               
Cow position:
               
chr29:5186528-5186365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
25-186
               

               
Cow position:
               
chr29:1325407-1325568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
25-208
               

               
Cow position:
               
chr29:24624215-24624407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
25-228
               

               
Cow position:
               
chr29:5063113-5063324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
25-245
               

               
Cow position:
               
chr29:5520519-5520283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
27-178
               

               
Cow position:
               
chr29:13028410-13028562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
28-181
               

               
Cow position:
               
chr29:13373264-13373426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
28-183
               

               
Cow position:
               
chr29:16365922-16365758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
28-226
               

               
Cow position:
               
chr29:43183346-43183139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 183
               

               
Conread position:
               
29-228
               

               
Cow position:
               
chr29:17109928-17110134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
30-164
               

               
Cow position:
               
chr29:30708649-30708515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
30-226
               

               
Cow position:
               
chr29:43544633-43544426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr29:35292061-35292267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr29:36357098-36357309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr29:38980103-38979899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr29:40791279-40791478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr29:41112908-41112709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
44, 172
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr29:42630090-42630298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
30-234
               

               
Cow position:
               
chr29:31981800-31982009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 156
               

               
Conread position:
               
30-246
               

               
Cow position:
               
chr29:17804504-17804730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
30-247
               

               
Cow position:
               
chr29:28066461-28066683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
30-249
               

               
Cow position:
               
chr29:30681740-30681501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
32-228
               

               
Cow position:
               
chr29:19125296-19125511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
32-237
               

               
Cow position:
               
chr29:4423468-4423260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr29:21285335-21285484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr29:34687810-34687961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 135
               

               
Conread position:
               
35-228
               

               
Cow position:
               
chr29:1007796-1007999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 29
               

               
Conread position:
               
35-228
               

               
Cow position:
               
chr29:32894239-32894438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr29:11527812-11527661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
36-228
               

               
Cow position:
               
chr29:28979521-28979335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
37-228
               

               
Cow position:
               
chr29:21666071-21666267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
38-183
               

               
Cow position:
               
chr29:8926482-8926334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
38-215
               

               
Cow position:
               
chr29:22162271-22162094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
5, 126
               

               
Conread position:
               
38-228
               

               
Cow position:
               
chr29:15947146-15947350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
38-228
               

               
Cow position:
               
chr29:20770326-20770525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
38-228
               

               
Cow position:
               
chr29:22028975-22028780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
38-228
               

               
Cow position:
               
chr29:23825231-23825031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
38-228
               

               
Cow position:
               
chr29:40117551-40117746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
38-253
               

               
Cow position:
               
chr29:7290755-7290979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
39-158
               

               
Cow position:
               
chr29:24578843-24578965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
39-173
               

               
Cow position:
               
chr29:10156321-10156189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
39-177
               

               
Cow position:
               
chr29:36217095-36217233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
39-183
               

               
Cow position:
               
chr29:23243897-23243751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
39-183
               

               
Cow position:
               
chr29:28840136-28840283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
39-183
               

               
Cow position:
               
chr29:45005647-45005500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
39-190
               

               
Cow position:
               
chr29:32211086-32210935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
39-212
               

               
Cow position:
               
chr29:22032661-22032477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
39-225
               

               
Cow position:
               
chr29:742669-742492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 132
               

               
Conread position:
               
39-227
               

               
Cow position:
               
chr29:27826503-27826685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:4874903-4874709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:9709674-9709874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:19762251-19762444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:19949289-19949486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:22723581-22723777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
31, 188
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:29324440-29324239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:29769371-29769173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:32197677-32197875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:34358998-34358797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
30, 194
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:35501674-35501484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:36530847-36531047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:39038289-39038088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
40-228
               

               
Cow position:
               
chr29:32656112-32655913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 109
               

               
Conread position:
               
41-253
               

               
Cow position:
               
chr29:21592690-21592907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
42-166
               

               
Cow position:
               
chr29:12625993-12625866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
42-243
               

               
Cow position:
               
chr29:34773754-34773553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
42-253
               

               
Cow position:
               
chr29:396396-396611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
43-175
               

               
Cow position:
               
chr29:28166234-28166103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
43-182
               

               
Cow position:
               
chr29:40873995-40874138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
43-183
               

               
Cow position:
               
chr29:847658-847513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
43-228
               

               
Cow position:
               
chr29:39111327-39111143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
44-162
               

               
Cow position:
               
chr29:11053874-11053754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
44-225
               

               
Cow position:
               
chr29:44236438-44236620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 127
               

               
Conread position:
               
44-226
               

               
Cow position:
               
chr29:31934364-31934555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr29:4085298-4085477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr29:9378622-9378816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr29:19176928-19176734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr29:28195530-28195352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
174, 24
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr29:34359835-34359645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
44-243
               

               
Cow position:
               
chr29:16278973-16279173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
44-245
               

               
Cow position:
               
chr29:9310585-9310801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
44-251
               

               
Cow position:
               
chr29:17154764-17154967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
44-252
               

               
Cow position:
               
chr29:1011595-1011385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
44-252
               

               
Cow position:
               
chr29:31928974-31929195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
45-228
               

               
Cow position:
               
chr29:26540554-26540359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
45-228
               

               
Cow position:
               
chr29:29308586-29308401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 125
               

               
Conread position:
               
45-251
               

               
Cow position:
               
chr29:3292934-3293147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
46-226
               

               
Cow position:
               
chr29:4520327-4520511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
46-228
               

               
Cow position:
               
chr29:36781317-36781129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
49-228
               

               
Cow position:
               
chr29:19363701-19363889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
49-228
               

               
Cow position:
               
chr29:22735115-22734925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
49-245
               

               
Cow position:
               
chr29:22729558-22729762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 195
               

               
Conread position:
               
52-178
               

               
Cow position:
               
chr29:39329610-39329481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
54-228
               

               
Cow position:
               
chr29:936205-936384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
54-228
               

               
Cow position:
               
chr29:15797947-15798132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 177
               

               
Conread position:
               
54-246
               

               
Cow position:
               
chr29:15796481-15796682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
55-228
               

               
Cow position:
               
chr29:12890681-12890857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
55-228
               

               
Cow position:
               
chr29:37293037-37293208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
55-248
               

               
Cow position:
               
chr29:40351076-40350876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
56-243
               

               
Cow position:
               
chr29:43088308-43088502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
65-181
               

               
Cow position:
               
chr29:18579828-18579714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
66-228
               

               
Cow position:
               
chr29:25432466-25432635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
66-253
               

               
Cow position:
               
chr29:22335217-22335020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
67-228
               

               
Cow position:
               
chr29:12440792-12440944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 68
               

               
Conread position:
               
68-228
               

               
Cow position:
               
chr29:10818438-10818279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
153, 95
               

               
Conread position:
               
70-228
               

               
Cow position:
               
chr29:415031-415185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
70-228
               

               
Cow position:
               
chr29:17282082-17282242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
73-183
               

               
Cow position:
               
chr29:17022167-17022277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
73-183
               

               
Cow position:
               
chr29:28948991-28949100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
73-226
               

               
Cow position:
               
chr29:8634671-8634831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
73-228
               

               
Cow position:
               
chr29:4441188-4441024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
73-228
               

               
Cow position:
               
chr29:14576876-14577038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
73-228
               

               
Cow position:
               
chr29:32215724-32215885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
73-253
               

               
Cow position:
               
chr29:3538659-3538476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
148, 93
               

               
Conread position:
               
73-253
               

               
Cow position:
               
chr29:9622675-9622499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
148, 91
               

               
Conread position:
               
73-253
               

               
Cow position:
               
chr29:11489563-11489386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
74-239
               

               
Cow position:
               
chr29:16657717-16657883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
76-183
               

               
Cow position:
               
chr29:26631061-26631168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
80-217
               

               
Cow position:
               
chr29:34688882-34688741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
82-183
               

               
Cow position:
               
chr29:19339030-19339128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
83-214
               

               
Cow position:
               
chr29:16536024-16536154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 96
               

               
Conread position:
               
83-219
               

               
Cow position:
               
chr29:39638871-39639011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
83-228
               

               
Cow position:
               
chr29:40763667-40763515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
84-228
               

               
Cow position:
               
chr29:1946880-1946734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
84-228
               

               
Cow position:
               
chr29:25092134-25092285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
84-249
               

               
Cow position:
               
chr29:17663733-17663558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
86-228
               

               
Cow position:
               
chr29:30206839-30206698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
86-253
               

               
Cow position:
               
chr29:19741871-19742045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
87-227
               

               
Cow position:
               
chr29:41223196-41223344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
88-234
               

               
Cow position:
               
chr29:33143322-33143169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
91-220
               

               
Cow position:
               
chr29:14227593-14227727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
91-228
               

               
Cow position:
               
chr29:7414536-7414675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 120
               

               
Conread position:
               
94-228
               

               
Cow position:
               
chr29:24660723-24660858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
95-228
               

               
Cow position:
               
chr29:22776118-22776257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
98-228
               

               
Cow position:
               
chr29:23678751-23678882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
99-212
               

               
Cow position:
               
chr29:32963580-32963692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
99-226
               

               
Cow position:
               
chr29:40112425-40112558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
99-228
               

               
Cow position:
               
chr29:36546739-36546601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
100-228
               

               
Cow position:
               
chr29:29296438-29296569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
102-253
               

               
Cow position:
               
chr29:17718973-17718823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
108-217
               

               
Cow position:
               
chr29:31594093-31593988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
110-228
               

               
Cow position:
               
chr29:25669148-25669264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
111-228
               

               
Cow position:
               
chr29:44985327-44985442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 13
               
Show alignments to all cow chromosomes.