Cow genome map

Conread name: OvF4-UMC-p4mm3-001-a05

Conread position: 1-158
Cow position: chrX:38066475-38066324 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 17

Conread position: 1-178
Cow position: chrX:41884432-41884261 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-226
Cow position: chrX:13913049-13913284 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 47

Conread position: 1-228
Cow position: chrX:1088161-1087937 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 47

Conread position: 1-228
Cow position: chrX:27306434-27306650 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 17

Conread position: 1-228
Cow position: chrX:29542237-29542017 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 161, 24

Conread position: 1-228
Cow position: chrX:45976904-45977135 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 13, 47

Conread position: 1-242
Cow position: chrX:918745-918505 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 16

Conread position: 1-253
Cow position: chrX:46291117-46291379 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 34

Conread position: 3-212
Cow position: chrX:32943104-32942881 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 4-227
Cow position: chrX:45383073-45382851 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 36, 17

Conread position: 4-253
Cow position: chrX:20678167-20677913 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 73

Conread position: 6-228
Cow position: chrX:38218690-38218924 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 11

Conread position: 7-228
Cow position: chrX:16984613-16984846 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 139

Conread position: 7-241
Cow position: chrX:40035460-40035215 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 23

Conread position: 8-160
Cow position: chrX:38853184-38853330 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 8-228
Cow position: chrX:29229984-29230218 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 39

Conread position: 9-183
Cow position: chrX:5135541-5135364 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 12

Conread position: 10-163
Cow position: chrX:7695735-7695884 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 25

Conread position: 10-171
Cow position: chrX:46429837-46429675 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 19

Conread position: 10-183
Cow position: chrX:40269473-40269650 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 24

Conread position: 10-224
Cow position: chrX:22393001-22392781 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 28

Conread position: 10-228
Cow position: chrX:5118518-5118287 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 9

Conread position: 10-228
Cow position: chrX:27261174-27261401 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 26

Conread position: 10-228
Cow position: chrX:37072376-37072597 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 170, 28

Conread position: 10-240
Cow position: chrX:29050232-29050465 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 29

Conread position: 11-155
Cow position: chrX:19273723-19273579 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 27

Conread position: 11-226
Cow position: chrX:45430037-45429821 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 24

Conread position: 12-227
Cow position: chrX:35542881-35543094 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 154, 25

Conread position: 12-228
Cow position: chrX:37781125-37780901 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 18

Conread position: 12-228
Cow position: chrX:45699981-45699769 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 26

Conread position: 13-228
Cow position: chrX:1466147-1466374 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 28

Conread position: 14-228
Cow position: chrX:24365838-24365611 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 112

Conread position: 14-233
Cow position: chrX:1616057-1615842 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 16

Conread position: 16-184
Cow position: chrX:40532059-40531886 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 17-242
Cow position: chrX:42171308-42171083 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 28, 110

Conread position: 18-228
Cow position: chrX:3806669-3806889 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 18-252
Cow position: chrX:17794969-17795213 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 227

Conread position: 19-159
Cow position: chrX:12082337-12082192 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 19-164
Cow position: chrX:4616022-4615874 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 11

Conread position: 19-228
Cow position: chrX:4269075-4268859 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 16

Conread position: 19-228
Cow position: chrX:11633667-11633893 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 6, 0

Conread position: 19-247
Cow position: chrX:24633669-24633924 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 226

Conread position: 19-253
Cow position: chrX:38642235-38642477 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 12, 197

Conread position: 20-242
Cow position: chrX:27511416-27511649 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 20-246
Cow position: chrX:20887649-20887417 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 200

Conread position: 21-182
Cow position: chrX:7277902-7278066 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 143

Conread position: 21-183
Cow position: chrX:169556-169390 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 21-183
Cow position: chrX:17725963-17726132 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 21-183
Cow position: chrX:23498689-23498522 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 81

Conread position: 21-183
Cow position: chrX:34502911-34503076 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 21-183
Cow position: chrX:36848588-36848421 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 74

Conread position: 21-190
Cow position: chrX:18694937-18694767 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 54

Conread position: 21-211
Cow position: chrX:23188788-23188596 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 14

Conread position: 21-226
Cow position: chrX:27228117-27228338 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 21-226
Cow position: chrX:41526535-41526325 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 56

Conread position: 21-228
Cow position: chrX:161400-161611 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 135

Conread position: 21-228
Cow position: chrX:1499654-1499865 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 149

Conread position: 21-228
Cow position: chrX:4289432-4289645 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 25, 151

Conread position: 21-228
Cow position: chrX:4403301-4403529 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 21-228
Cow position: chrX:6559457-6559245 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 146

Conread position: 21-228
Cow position: chrX:9651037-9650816 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 21-228
Cow position: chrX:11938947-11938742 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 144

Conread position: 21-228
Cow position: chrX:24749076-24749298 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 73

Conread position: 21-228
Cow position: chrX:31436463-31436680 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 21-228
Cow position: chrX:36866163-36866384 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 116

Conread position: 21-228
Cow position: chrX:41123052-41123256 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 146

Conread position: 21-228
Cow position: chrX:42331277-42331484 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 198

Conread position: 21-241
Cow position: chrX:32821019-32821264 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 21-241
Cow position: chrX:40283116-40283345 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 12

Conread position: 21-245
Cow position: chrX:35413610-35413821 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 9

Conread position: 21-250
Cow position: chrX:20881950-20881728 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 55

Conread position: 21-252
Cow position: chrX:42836172-42836416 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 22-178
Cow position: chrX:30543294-30543134 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 149

Conread position: 22-180
Cow position: chrX:31312019-31312184 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 22-228
Cow position: chrX:12095784-12095560 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 22-228
Cow position: chrX:42893914-42894133 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 151

Conread position: 22-228
Cow position: chrX:43115141-43115360 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 23-164
Cow position: chrX:19943245-19943099 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 92

Conread position: 23-164
Cow position: chrX:29553276-29553422 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 23-173
Cow position: chrX:36514901-36514745 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 23-178
Cow position: chrX:23514024-23513867 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 118

Conread position: 23-228
Cow position: chrX:9635199-9634981 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 210

Conread position: 23-228
Cow position: chrX:13177484-13177273 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 38, 6

Conread position: 23-228
Cow position: chrX:35268857-35269067 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 33

Conread position: 23-228
Cow position: chrX:37119586-37119786 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 133

Conread position: 23-237
Cow position: chrX:17966335-17966552 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 12

Conread position: 24-163
Cow position: chrX:11082630-11082486 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 24-226
Cow position: chrX:24054666-24054870 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 11

Conread position: 24-228
Cow position: chrX:12972683-12972889 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 23

Conread position: 24-228
Cow position: chrX:19469513-19469304 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 15, 136

Conread position: 24-228
Cow position: chrX:45502138-45502346 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 173

Conread position: 24-253
Cow position: chrX:22115325-22115075 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 25-166
Cow position: chrX:37232402-37232546 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 25-183
Cow position: chrX:11717790-11717629 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 146

Conread position: 25-217
Cow position: chrX:14275751-14275549 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 167

Conread position: 25-228
Cow position: chrX:27431920-27431713 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 13

Conread position: 25-228
Cow position: chrX:31442836-31442628 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 18, 146

Conread position: 25-228
Cow position: chrX:34792318-34792112 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 15, 92

Conread position: 25-228
Cow position: chrX:42247189-42246970 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 25-228
Cow position: chrX:46070178-46069974 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 147

Conread position: 25-245
Cow position: chrX:14973745-14973530 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 196, 10

Conread position: 26-228
Cow position: chrX:34376938-34377150 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 26-228
Cow position: chrX:42450019-42449802 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 26-237
Cow position: chrX:28923036-28923241 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 40

Conread position: 26-247
Cow position: chrX:20957234-20957475 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 44, 0

Conread position: 27-228
Cow position: chrX:38549441-38549657 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 28-226
Cow position: chrX:42855455-42855672 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 30-217
Cow position: chrX:2523683-2523500 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 137

Conread position: 30-228
Cow position: chrX:17956691-17956900 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 13, 77

Conread position: 30-228
Cow position: chrX:20584327-20584523 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 165
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 139

Conread position: 30-228
Cow position: chrX:32208824-32208616 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 10, 94

Conread position: 30-228
Cow position: chrX:38964106-38964308 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 13, 154

Conread position: 30-241
Cow position: chrX:34505049-34504829 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 117

Conread position: 30-252
Cow position: chrX:34837064-34836839 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 39, 205

Conread position: 30-254
Cow position: chrX:6407544-6407781 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 67

Conread position: 31-226
Cow position: chrX:28940243-28940453 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 12

Conread position: 33-246
Cow position: chrX:1122540-1122319 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 35, 50

Conread position: 34-241
Cow position: chrX:39180231-39180012 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 100

Conread position: 35-228
Cow position: chrX:12437265-12437072 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 62

Conread position: 35-228
Cow position: chrX:25441536-25441347 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 66

Conread position: 35-241
Cow position: chrX:30824000-30824209 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 27

Conread position: 35-247
Cow position: chrX:35224300-35224505 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 120

Conread position: 35-248
Cow position: chrX:4768746-4768957 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 10, 5

Conread position: 36-228
Cow position: chrX:23088862-23089046 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 37-228
Cow position: chrX:27145611-27145810 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 38-156
Cow position: chrX:29585127-29585248 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 38-181
Cow position: chrX:878372-878226 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 38-183
Cow position: chrX:40557671-40557524 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 128

Conread position: 38-225
Cow position: chrX:34411854-34412056 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 38-226
Cow position: chrX:27175011-27175209 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 130, 36

Conread position: 38-228
Cow position: chrX:4153023-4152833 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 32, 143

Conread position: 38-228
Cow position: chrX:19394561-19394766 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 38-228
Cow position: chrX:34543792-34543997 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 38-246
Cow position: chrX:5134483-5134706 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 11

Conread position: 38-246
Cow position: chrX:40685321-40685102 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 5, 205

Conread position: 39-156
Cow position: chrX:25328606-25328487 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 39-181
Cow position: chrX:29501872-29501730 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 37

Conread position: 39-183
Cow position: chrX:616250-616102 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 39-183
Cow position: chrX:618993-618852 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 78

Conread position: 39-183
Cow position: chrX:36068024-36068169 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 126

Conread position: 39-187
Cow position: chrX:38006757-38006610 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 137, 35

Conread position: 39-192
Cow position: chrX:18273046-18272895 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 57

Conread position: 39-209
Cow position: chrX:34532529-34532709 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 39-211
Cow position: chrX:6414056-6414231 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 44

Conread position: 39-219
Cow position: chrX:47061405-47061588 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 39-228
Cow position: chrX:2935966-2936164 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chrX:4466976-4467162 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 31, 130

Conread position: 39-228
Cow position: chrX:6544266-6544456 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 57

Conread position: 39-228
Cow position: chrX:6599773-6599563 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chrX:8869393-8869193 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chrX:9201557-9201754 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chrX:11656090-11656289 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chrX:12979825-12979624 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chrX:21986281-21986090 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 133

Conread position: 39-228
Cow position: chrX:22074804-22075006 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 13, 176

Conread position: 39-228
Cow position: chrX:34314040-34314232 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 20

Conread position: 39-228
Cow position: chrX:38560568-38560761 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 39-228
Cow position: chrX:41192713-41192900 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 142

Conread position: 39-228
Cow position: chrX:41871076-41871268 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 28, 127

Conread position: 39-228
Cow position: chrX:42381103-42380901 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 30, 189

Conread position: 39-228
Cow position: chrX:42479842-42480038 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 31, 0

Conread position: 39-228
Cow position: chrX:45110664-45110862 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 39-234
Cow position: chrX:11326088-11325891 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 31, 98

Conread position: 39-234
Cow position: chrX:26881556-26881345 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 35

Conread position: 39-234
Cow position: chrX:39290368-39290572 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 39-245
Cow position: chrX:5919501-5919723 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 39-245
Cow position: chrX:35985829-35986051 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 39-245
Cow position: chrX:42927815-42927603 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 171

Conread position: 39-253
Cow position: chrX:27668949-27668723 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 181
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 171

Conread position: 40-177
Cow position: chrX:39220089-39220229 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 40-228
Cow position: chrX:35658809-35659005 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 56

Conread position: 40-228
Cow position: chrX:38094506-38094315 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 43

Conread position: 40-249
Cow position: chrX:44397025-44397242 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 52

Conread position: 40-253
Cow position: chrX:4399135-4399357 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 69

Conread position: 41-228
Cow position: chrX:9252152-9251952 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 42-160
Cow position: chrX:25788893-25788772 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 42-180
Cow position: chrX:42469930-42469789 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 129

Conread position: 42-182
Cow position: chrX:23266427-23266569 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 130

Conread position: 42-228
Cow position: chrX:29467766-29467571 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 42-228
Cow position: chrX:33855208-33855015 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 10, 82

Conread position: 42-237
Cow position: chrX:10305335-10305143 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 41

Conread position: 42-246
Cow position: chrX:16836274-16836062 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 49

Conread position: 42-253
Cow position: chrX:26205436-26205219 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 98

Conread position: 43-212
Cow position: chrX:41862377-41862554 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 43-228
Cow position: chrX:35885714-35885521 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 44-161
Cow position: chrX:23091884-23092005 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 44-164
Cow position: chrX:11073177-11073054 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 44-178
Cow position: chrX:22387232-22387099 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 39

Conread position: 44-178
Cow position: chrX:23562646-23562783 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 44-182
Cow position: chrX:15147179-15147041 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 39

Conread position: 44-183
Cow position: chrX:27394012-27393870 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 44-192
Cow position: chrX:27667447-27667590 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 44-209
Cow position: chrX:4515699-4515879 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 84

Conread position: 44-220
Cow position: chrX:41068739-41068922 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 44-228
Cow position: chrX:4559753-4559945 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 24, 33

Conread position: 44-228
Cow position: chrX:27446700-27446894 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 44-228
Cow position: chrX:32910118-32910308 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 78

Conread position: 44-228
Cow position: chrX:35285187-35285385 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 44-229
Cow position: chrX:31294558-31294357 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 44-230
Cow position: chrX:22915026-22914833 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 80

Conread position: 44-244
Cow position: chrX:15007135-15006933 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 112

Conread position: 44-245
Cow position: chrX:11614712-11614911 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 39

Conread position: 44-247
Cow position: chrX:35278343-35278540 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 104

Conread position: 44-253
Cow position: chrX:41027173-41027401 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 45-181
Cow position: chrX:34315534-34315673 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 128

Conread position: 45-187
Cow position: chrX:42160641-42160785 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 29

Conread position: 45-226
Cow position: chrX:11762986-11762802 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 128

Conread position: 45-228
Cow position: chrX:907961-908152 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 61

Conread position: 45-228
Cow position: chrX:8925714-8925891 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 107

Conread position: 45-253
Cow position: chrX:7722007-7722213 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 96, 25

Conread position: 46-188
Cow position: chrX:6690244-6690097 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 46-190
Cow position: chrX:32978065-32977921 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 37

Conread position: 46-220
Cow position: chrX:47079643-47079830 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 46-225
Cow position: chrX:16762787-16762975 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 46-228
Cow position: chrX:41238338-41238151 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 46-253
Cow position: chrX:20583682-20583899 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 196

Conread position: 46-253
Cow position: chrX:31479987-31480203 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 59

Conread position: 48-228
Cow position: chrX:44991395-44991206 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 54

Conread position: 49-173
Cow position: chrX:34508563-34508690 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 49-183
Cow position: chrX:43730204-43730068 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 49-184
Cow position: chrX:31626954-31626822 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 34

Conread position: 49-212
Cow position: chrX:18637508-18637674 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 123

Conread position: 49-226
Cow position: chrX:29601809-29601620 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 49-228
Cow position: chrX:20151879-20152059 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 111, 21

Conread position: 49-228
Cow position: chrX:31744986-31744804 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 127

Conread position: 49-228
Cow position: chrX:32877356-32877168 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 180

Conread position: 49-228
Cow position: chrX:41810149-41809964 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 49-234
Cow position: chrX:47855000-47855194 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 73

Conread position: 49-237
Cow position: chrX:3860609-3860430 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 172, 21

Conread position: 49-242
Cow position: chrX:28098345-28098543 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 178

Conread position: 49-245
Cow position: chrX:5026275-5026482 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 50-183
Cow position: chrX:17888399-17888267 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 33

Conread position: 50-187
Cow position: chrX:18964803-18964668 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 24

Conread position: 50-228
Cow position: chrX:20340623-20340447 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 112

Conread position: 50-228
Cow position: chrX:46072797-46072619 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 131

Conread position: 50-247
Cow position: chrX:27075031-27074822 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 198

Conread position: 51-252
Cow position: chrX:35383015-35382808 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 60

Conread position: 52-183
Cow position: chrX:40355057-40355187 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 31

Conread position: 52-216
Cow position: chrX:13647763-13647586 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 54-228
Cow position: chrX:32866899-32867081 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 56-166
Cow position: chrX:21573599-21573711 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 69

Conread position: 56-228
Cow position: chrX:23359085-23358906 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 35

Conread position: 56-245
Cow position: chrX:7911046-7910842 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 57-228
Cow position: chrX:20666871-20666691 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 59-236
Cow position: chrX:11181167-11180987 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 131

Conread position: 61-228
Cow position: chrX:41858850-41858673 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 65-228
Cow position: chrX:42875250-42875420 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 66-228
Cow position: chrX:25232033-25232193 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 103

Conread position: 66-228
Cow position: chrX:41166786-41166618 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 67-226
Cow position: chrX:6480555-6480386 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 96, 15

Conread position: 67-228
Cow position: chrX:23471826-23471657 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 0

Conread position: 68-187
Cow position: chrX:41939865-41939984 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 7

Conread position: 68-241
Cow position: chrX:42432466-42432290 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 105, 10

Conread position: 68-243
Cow position: chrX:33539211-33539376 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 153, 91

Conread position: 70-226
Cow position: chrX:27170782-27170945 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 71-228
Cow position: chrX:14135725-14135886 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 109, 15

Conread position: 72-228
Cow position: chrX:11653815-11653978 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 72-253
Cow position: chrX:6640470-6640658 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 71

Conread position: 73-183
Cow position: chrX:23860948-23860837 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 73-183
Cow position: chrX:29688129-29688020 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 73-192
Cow position: chrX:23574701-23574820 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 35

Conread position: 73-228
Cow position: chrX:2314573-2314407 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 74

Conread position: 73-228
Cow position: chrX:16763879-16763719 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 73-228
Cow position: chrX:30840592-30840752 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 73-228
Cow position: chrX:35681613-35681778 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 73-228
Cow position: chrX:36722759-36722602 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 21

Conread position: 73-228
Cow position: chrX:37749937-37749781 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 21

Conread position: 73-228
Cow position: chrX:37752060-37751900 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 73-228
Cow position: chrX:41453348-41453510 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 73-228
Cow position: chrX:46068713-46068552 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 73-228
Cow position: chrX:46909861-46910019 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 151

Conread position: 73-228
Cow position: chrX:48822296-48822131 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 74-228
Cow position: chrX:5487889-5487737 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 147, 19

Conread position: 74-228
Cow position: chrX:31983538-31983367 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 74-246
Cow position: chrX:8326951-8327133 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 110, 172

Conread position: 75-228
Cow position: chrX:23497643-23497486 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 76

Conread position: 75-241
Cow position: chrX:32747780-32747947 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 145

Conread position: 75-247
Cow position: chrX:45968196-45968375 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 154

Conread position: 77-208
Cow position: chrX:40543471-40543338 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 66

Conread position: 79-228
Cow position: chrX:12802-12954 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 43

Conread position: 79-228
Cow position: chrX:27415528-27415377 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 124

Conread position: 79-253
Cow position: chrX:1101609-1101791 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 80-228
Cow position: chrX:41215378-41215534 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 11

Conread position: 83-228
Cow position: chrX:34991420-34991572 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 84-228
Cow position: chrX:17525810-17525666 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 122
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 84, 136

Conread position: 84-228
Cow position: chrX:31827787-31827644 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 116

Conread position: 84-234
Cow position: chrX:18812166-18812313 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 134, 80

Conread position: 86-228
Cow position: chrX:39642564-39642417 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 41

Conread position: 87-228
Cow position: chrX:10252140-10251991 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 87-228
Cow position: chrX:11589307-11589156 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 87-244
Cow position: chrX:44094301-44094145 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 120

Conread position: 88-253
Cow position: chrX:29682050-29681879 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 92, 69

Conread position: 91-228
Cow position: chrX:11529407-11529549 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 93-228
Cow position: chrX:4366406-4366556 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 95-247
Cow position: chrX:39419646-39419492 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 138

Conread position: 96-224
Cow position: chrX:25420400-25420529 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 125, 0

Conread position: 97-245
Cow position: chrX:4486954-4486797 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 148

Conread position: 98-228
Cow position: chrX:14900431-14900300 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 70

Conread position: 98-228
Cow position: chrX:40556388-40556252 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 115
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 101-228
Cow position: chrX:43059177-43059045 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 102-228
Cow position: chrX:1571514-1571385 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 102-228
Cow position: chrX:35029851-35029724 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 106-226
Cow position: chrX:31279845-31279718 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 109-228
Cow position: chrX:43028314-43028440 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 118-246
Cow position: chrX:26956461-26956332 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 0

Show alignments to all cow chromosomes.