Non-Coding RNA Search

Cow genome map


           Conread name:
           OvF4-UMC-p4mm3-005-g07
        

               Conread position:
               1-147
               

               Cow position:
               chr1:81355747-81355596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-149
               

               Cow position:
               chr1:79640329-79640179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-151
               

               Cow position:
               chr1:85647820-85647671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               1-153
               

               Cow position:
               chr1:25383625-25383781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               21, 53
               

               Conread position:
               1-153
               

               Cow position:
               chr1:30136393-30136241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               132, 67
               

               Conread position:
               1-153
               

               Cow position:
               chr1:57090937-57091091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-153
               

               Cow position:
               chr1:85162588-85162434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr1:12978642-12978796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               1-156
               

               Cow position:
               chr1:78096886-78097043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1-157
               

               Cow position:
               chr1:89381235-89381392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               61, 36
               

               Conread position:
               1-158
               

               Cow position:
               chr1:35671504-35671657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               1-158
               

               Cow position:
               chr1:41047342-41047185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               1-158
               

               Cow position:
               chr1:45553282-45553125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 86
               

               Conread position:
               1-158
               

               Cow position:
               chr1:49153277-49153434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 90
               

               Conread position:
               1-158
               

               Cow position:
               chr1:49825108-49824946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr1:62997758-62997914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               1-158
               

               Cow position:
               chr1:78810999-78811156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               65, 36
               

               Conread position:
               1-158
               

               Cow position:
               chr1:81481423-81481264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr1:81613348-81613507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr1:84255725-84255885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr1:84811981-84811821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr1:98551678-98551837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 143
               

               Conread position:
               1-159
               

               Cow position:
               chr1:83582974-83582814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-159
               

               Cow position:
               chr1:88652591-88652755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               1-160
               

               Cow position:
               chr1:3167113-3166954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               1-160
               

               Cow position:
               chr1:79003935-79004092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               61, 96
               

               Conread position:
               1-160
               

               Cow position:
               chr1:83072399-83072561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr1:12464704-12464542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               1-163
               

               Cow position:
               chr1:86682600-86682443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 23
               

               Conread position:
               1-163
               

               Cow position:
               chr1:98360438-98360281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               1-164
               

               Cow position:
               chr1:7023080-7023247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-164
               

               Cow position:
               chr1:79844428-79844589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               1-168
               

               Cow position:
               chr1:89388299-89388474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr1:61742008-61741837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               60, 81
               

               Conread position:
               1-177
               

               Cow position:
               chr1:91039213-91039036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               1-190
               

               Cow position:
               chr1:53458658-53458844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               1-196
               

               Cow position:
               chr1:8129009-8128807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               1-196
               

               Cow position:
               chr1:22827116-22827317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               160
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-196
               

               Cow position:
               chr1:46143501-46143297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               1-199
               

               Cow position:
               chr1:33998718-33998923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 87
               

               Conread position:
               1-199
               

               Cow position:
               chr1:78066577-78066369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 36
               

               Conread position:
               1-199
               

               Cow position:
               chr1:85771970-85772180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               1-199
               

               Cow position:
               chr1:92590156-92590347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               133, 61
               

               Conread position:
               1-205
               

               Cow position:
               chr1:89158168-89157950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr1:37322040-37321805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               17, 87
               

               Conread position:
               1-224
               

               Cow position:
               chr1:43505486-43505729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr1:64302286-64302045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr1:43286305-43286535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 134
               

               Conread position:
               1-225
               

               Cow position:
               chr1:56225428-56225672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr1:89509962-89509725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-232
               

               Cow position:
               chr1:52467263-52467501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 86
               

               Conread position:
               1-233
               

               Cow position:
               chr1:197046-196792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-233
               

               Cow position:
               chr1:40600002-40600239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               14, 137
               

               Conread position:
               1-233
               

               Cow position:
               chr1:52662213-52661961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               61, 52
               

               Conread position:
               1-233
               

               Cow position:
               chr1:68817837-68817586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               2-150
               

               Cow position:
               chr1:89230269-89230121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               60, 89
               

               Conread position:
               2-158
               

               Cow position:
               chr1:5597247-5597093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               2-158
               

               Cow position:
               chr1:91023505-91023349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               132, 61
               

               Conread position:
               2-158
               

               Cow position:
               chr1:102306180-102306028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               132, 60
               

               Conread position:
               2-160
               

               Cow position:
               chr1:68253553-68253716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               2-164
               

               Cow position:
               chr1:86912401-86912564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               2-171
               

               Cow position:
               chr1:93043982-93044148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               2-198
               

               Cow position:
               chr1:64113832-64113627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               2-225
               

               Cow position:
               chr1:82513393-82513146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               3-158
               

               Cow position:
               chr1:45223544-45223699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               3-158
               

               Cow position:
               chr1:55705286-55705125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               3-224
               

               Cow position:
               chr1:81290470-81290709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               4-233
               

               Cow position:
               chr1:5637097-5636863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               5-158
               

               Cow position:
               chr1:24133096-24132945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               5-158
               

               Cow position:
               chr1:48206568-48206418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               131, 60
               

               Conread position:
               5-158
               

               Cow position:
               chr1:52912932-52912780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               5-158
               

               Cow position:
               chr1:89349928-89350083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               5-158
               

               Cow position:
               chr1:90621543-90621387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               5-160
               

               Cow position:
               chr1:53308427-53308273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 94
               

               Conread position:
               5-164
               

               Cow position:
               chr1:95974361-95974525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               5-171
               

               Cow position:
               chr1:22729018-22729187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               5-171
               

               Cow position:
               chr1:98576012-98576178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               5-198
               

               Cow position:
               chr1:97833675-97833870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               5-199
               

               Cow position:
               chr1:95176902-95177092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               57, 93
               

               Conread position:
               5-224
               

               Cow position:
               chr1:68863000-68863224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               129, 10
               

               Conread position:
               5-224
               

               Cow position:
               chr1:75744825-75745065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               5-225
               

               Cow position:
               chr1:67654356-67654119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               6-148
               

               Cow position:
               chr1:99793515-99793655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               6-158
               

               Cow position:
               chr1:3882495-3882341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               66, 58
               

               Conread position:
               6-158
               

               Cow position:
               chr1:47233513-47233360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 7
               

               Conread position:
               6-158
               

               Cow position:
               chr1:71253587-71253438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               6-158
               

               Cow position:
               chr1:88913284-88913437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 93
               

               Conread position:
               6-158
               

               Cow position:
               chr1:89448863-89449018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               6-158
               

               Cow position:
               chr1:95072295-95072450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               6-160
               

               Cow position:
               chr1:44506935-44507093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               6-161
               

               Cow position:
               chr1:80900083-80900240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 130
               

               Conread position:
               6-164
               

               Cow position:
               chr1:92369701-92369858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               6-198
               

               Cow position:
               chr1:101634678-101634872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               6-200
               

               Cow position:
               chr1:100762041-100762249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               6-224
               

               Cow position:
               chr1:89158737-89158503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               7, 84
               

               Conread position:
               6-233
               

               Cow position:
               chr1:102784922-102785160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 69
               

               Conread position:
               7-153
               

               Cow position:
               chr1:38401762-38401912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               7-158
               

               Cow position:
               chr1:13637698-13637545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               7-158
               

               Cow position:
               chr1:22823869-22824023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               7-158
               

               Cow position:
               chr1:43389083-43388934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               7-158
               

               Cow position:
               chr1:44125670-44125520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               7-158
               

               Cow position:
               chr1:48214189-48214040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 15
               

               Conread position:
               7-158
               

               Cow position:
               chr1:54206849-54206700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               55, 75
               

               Conread position:
               7-158
               

               Cow position:
               chr1:80584396-80584547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               7-225
               

               Cow position:
               chr1:42873987-42873771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               55, 152
               

               Conread position:
               8-157
               

               Cow position:
               chr1:61884880-61885030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               54, 7
               

               Conread position:
               8-157
               

               Cow position:
               chr1:100800319-100800470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               8-158
               

               Cow position:
               chr1:1956364-1956217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               8-160
               

               Cow position:
               chr1:52039605-52039757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 7
               

               Conread position:
               8-200
               

               Cow position:
               chr1:98030888-98031093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               10-156
               

               Cow position:
               chr1:82884425-82884279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               52, 104
               

               Conread position:
               10-173
               

               Cow position:
               chr1:83618640-83618472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 157
               

               Conread position:
               10-190
               

               Cow position:
               chr1:73960671-73960858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               52, 98
               

               Conread position:
               11-151
               

               Cow position:
               chr1:81868759-81868619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               11-158
               

               Cow position:
               chr1:31855280-31855129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               11-158
               

               Cow position:
               chr1:37886837-37886694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               123, 51
               

               Conread position:
               11-164
               

               Cow position:
               chr1:48730860-48730707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               126, 51
               

               Conread position:
               11-164
               

               Cow position:
               chr1:68845199-68845044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               11-199
               

               Cow position:
               chr1:39224957-39224765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               12-158
               

               Cow position:
               chr1:90904785-90904638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               13-225
               

               Cow position:
               chr1:45575904-45576126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 26
               

               Conread position:
               15-133
               

               Cow position:
               chr1:5023789-5023670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               15-158
               

               Cow position:
               chr1:3942242-3942098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 128
               

               Conread position:
               15-158
               

               Cow position:
               chr1:4581357-4581212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               15-158
               

               Cow position:
               chr1:43311799-43311653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               15-158
               

               Cow position:
               chr1:48105457-48105318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               15-158
               

               Cow position:
               chr1:50931002-50930861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               119, 71
               

               Conread position:
               15-158
               

               Cow position:
               chr1:65318548-65318692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               15-158
               

               Cow position:
               chr1:80841620-80841764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               15-158
               

               Cow position:
               chr1:81580150-81580295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               15-158
               

               Cow position:
               chr1:89342013-89341862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               15-160
               

               Cow position:
               chr1:34771530-34771382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               15-160
               

               Cow position:
               chr1:77232605-77232457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               15-163
               

               Cow position:
               chr1:30983518-30983372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               123, 7
               

               Conread position:
               15-163
               

               Cow position:
               chr1:54267964-54267816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 63
               

               Conread position:
               15-163
               

               Cow position:
               chr1:82556436-82556290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               51, 72
               

               Conread position:
               15-164
               

               Cow position:
               chr1:101632364-101632212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               15-165
               

               Cow position:
               chr1:100474206-100474361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               15-171
               

               Cow position:
               chr1:64572488-64572646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               15-183
               

               Cow position:
               chr1:5006135-5006302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               15-199
               

               Cow position:
               chr1:70434972-70435160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 76
               

               Conread position:
               15-199
               

               Cow position:
               chr1:74956044-74955858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               119, 50
               

               Conread position:
               15-224
               

               Cow position:
               chr1:97303276-97303048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 138
               

               Conread position:
               15-224
               

               Cow position:
               chr1:97611687-97611468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               15-233
               

               Cow position:
               chr1:41027048-41027281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               15-233
               

               Cow position:
               chr1:82936624-82936390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               15-233
               

               Cow position:
               chr1:86110763-86110529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               15-233
               

               Cow position:
               chr1:101507333-101507564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 174
               

               Conread position:
               16-150
               

               Cow position:
               chr1:30504475-30504611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               16-158
               

               Cow position:
               chr1:52994998-52995144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               16-158
               

               Cow position:
               chr1:74822421-74822569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               16-158
               

               Cow position:
               chr1:78857355-78857211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               16-158
               

               Cow position:
               chr1:93554811-93554954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 6
               

               Conread position:
               16-164
               

               Cow position:
               chr1:45555340-45555489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 127
               

               Conread position:
               16-164
               

               Cow position:
               chr1:85550104-85549953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               16-164
               

               Cow position:
               chr1:90868466-90868323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 6
               

               Conread position:
               16-188
               

               Cow position:
               chr1:27959576-27959401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               16-198
               

               Cow position:
               chr1:70538585-70538779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               16-209
               

               Cow position:
               chr1:69264784-69264974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               120, 47
               

               Conread position:
               16-220
               

               Cow position:
               chr1:75382955-75383164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               46, 57
               

               Conread position:
               16-224
               

               Cow position:
               chr1:71295322-71295099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               17-120
               

               Cow position:
               chr1:61560748-61560644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               17-158
               

               Cow position:
               chr1:3965811-3965951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               17-158
               

               Cow position:
               chr1:5135734-5135591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               17-158
               

               Cow position:
               chr1:10716473-10716614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               17-158
               

               Cow position:
               chr1:39510082-39509940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               17-158
               

               Cow position:
               chr1:55753240-55753098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               17-162
               

               Cow position:
               chr1:19227082-19226935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               17-163
               

               Cow position:
               chr1:62034853-62034706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 91
               

               Conread position:
               17-164
               

               Cow position:
               chr1:43312056-43311907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               17-164
               

               Cow position:
               chr1:67529030-67529179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               18-151
               

               Cow position:
               chr1:37309543-37309408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               18-151
               

               Cow position:
               chr1:95215213-95215079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 5
               

               Conread position:
               18-158
               

               Cow position:
               chr1:4032608-4032750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               18-158
               

               Cow position:
               chr1:11729149-11729293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               18-158
               

               Cow position:
               chr1:39068980-39068838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               18-158
               

               Cow position:
               chr1:55428981-55428838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               18-158
               

               Cow position:
               chr1:67688606-67688465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 87
               

               Conread position:
               18-164
               

               Cow position:
               chr1:6752257-6752107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               18-164
               

               Cow position:
               chr1:42541573-42541723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               18-164
               

               Cow position:
               chr1:50991909-50992058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               18-164
               

               Cow position:
               chr1:69695017-69694868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 49
               

               Conread position:
               18-165
               

               Cow position:
               chr1:62964243-62964391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 25
               

               Conread position:
               18-170
               

               Cow position:
               chr1:93810404-93810559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               18-199
               

               Cow position:
               chr1:97090303-97090492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               18-224
               

               Cow position:
               chr1:38205450-38205656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 147
               

               Conread position:
               18-233
               

               Cow position:
               chr1:42545803-42545583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               48, 160
               

               Conread position:
               19-148
               

               Cow position:
               chr1:27380437-27380564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               19-158
               

               Cow position:
               chr1:19515642-19515501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               19-158
               

               Cow position:
               chr1:95676312-95676173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               19-164
               

               Cow position:
               chr1:6941437-6941594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               19-164
               

               Cow position:
               chr1:6958850-6959007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               19-164
               

               Cow position:
               chr1:42537346-42537198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               19-171
               

               Cow position:
               chr1:84768902-84768748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               19-199
               

               Cow position:
               chr1:3923823-3923630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               19-199
               

               Cow position:
               chr1:78838774-78838961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 18
               

               Conread position:
               19-209
               

               Cow position:
               chr1:65028511-65028706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               43, 156
               

               Conread position:
               19-224
               

               Cow position:
               chr1:19482104-19481895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               19-224
               

               Cow position:
               chr1:21787313-21787529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 163
               

               Conread position:
               19-225
               

               Cow position:
               chr1:72304411-72304196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               20-157
               

               Cow position:
               chr1:74082004-74081864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               20-158
               

               Cow position:
               chr1:42175700-42175845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               21-171
               

               Cow position:
               chr1:24530481-24530632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               21-224
               

               Cow position:
               chr1:20667763-20667545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 125
               

               Conread position:
               21-233
               

               Cow position:
               chr1:69539670-69539899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               22-158
               

               Cow position:
               chr1:7971391-7971530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               22-158
               

               Cow position:
               chr1:10778543-10778681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               22-158
               

               Cow position:
               chr1:54157274-54157414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               22-158
               

               Cow position:
               chr1:83025184-83025045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               22-158
               

               Cow position:
               chr1:97231940-97232078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               22-162
               

               Cow position:
               chr1:40935787-40935644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               22-162
               

               Cow position:
               chr1:48769782-48769924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               22-171
               

               Cow position:
               chr1:8670753-8670907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               22-196
               

               Cow position:
               chr1:69481968-69481790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               22-199
               

               Cow position:
               chr1:71078980-71078788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               22-224
               

               Cow position:
               chr1:54478309-54478521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               22-226
               

               Cow position:
               chr1:10633026-10633247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               22-231
               

               Cow position:
               chr1:88338647-88338862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               22-233
               

               Cow position:
               chr1:64678674-64678894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               8, 130
               

               Conread position:
               22-233
               

               Cow position:
               chr1:93590606-93590376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               23-158
               

               Cow position:
               chr1:87197801-87197938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               23-171
               

               Cow position:
               chr1:66430273-66430421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               23-224
               

               Cow position:
               chr1:62142503-62142302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 104
               

               Conread position:
               24-158
               

               Cow position:
               chr1:19962035-19962168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               24-158
               

               Cow position:
               chr1:98511909-98512044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               24-196
               

               Cow position:
               chr1:53452519-53452693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 41
               

               Conread position:
               24-199
               

               Cow position:
               chr1:39427023-39426843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               24-199
               

               Cow position:
               chr1:77720261-77720086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               114, 38
               

               Conread position:
               24-220
               

               Cow position:
               chr1:82880628-82880832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               24-233
               

               Cow position:
               chr1:42887295-42887066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               50, 41
               

               Conread position:
               25-153
               

               Cow position:
               chr1:41056661-41056791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               25-163
               

               Cow position:
               chr1:26934286-26934148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               26-158
               

               Cow position:
               chr1:45315652-45315518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               29-148
               

               Cow position:
               chr1:31598912-31599033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               30-158
               

               Cow position:
               chr1:8603-8733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               30-164
               

               Cow position:
               chr1:66752641-66752503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               30-199
               

               Cow position:
               chr1:61011169-61011349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               30-233
               

               Cow position:
               chr1:31272454-31272245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 185
               

               Conread position:
               31-158
               

               Cow position:
               chr1:759429-759300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               32-158
               

               Cow position:
               chr1:61005572-61005445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               32-164
               

               Cow position:
               chr1:62036792-62036927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               32-164
               

               Cow position:
               chr1:68688573-68688707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               32-170
               

               Cow position:
               chr1:52429670-52429529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               33-158
               

               Cow position:
               chr1:93499611-93499738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 111
               

               Conread position:
               33-199
               

               Cow position:
               chr1:97954477-97954309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               37-199
               

               Cow position:
               chr1:95516034-95516196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 125
               

               Conread position:
               37-229
               

               Cow position:
               chr1:99605192-99604981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               38-233
               

               Cow position:
               chr1:100852705-100852918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               24, 153
               

               Conread position:
               39-158
               

               Cow position:
               chr1:83783933-83783812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               39-225
               

               Cow position:
               chr1:85028950-85029142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               27, 124
               

               Conread position:
               43-224
               

               Cow position:
               chr1:48618243-48618042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               45-158
               

               Cow position:
               chr1:55685975-55685860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               45-199
               

               Cow position:
               chr1:43499293-43499136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               45-234
               

               Cow position:
               chr1:30948995-30949197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               46-199
               

               Cow position:
               chr1:41138140-41137974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               46-199
               

               Cow position:
               chr1:79663435-79663279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               48-190
               

               Cow position:
               chr1:71946078-71945935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 127
               

               Conread position:
               51-229
               

               Cow position:
               chr1:12595567-12595376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               11, 108
               

               Conread position:
               53-158
               

               Cow position:
               chr1:63460889-63460996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               53-176
               

               Cow position:
               chr1:84288414-84288540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               55-158
               

               Cow position:
               chr1:42774924-42775028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               55-233
               

               Cow position:
               chr1:85339400-85339591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               56-196
               

               Cow position:
               chr1:85866173-85866309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               6, 81
               

               Conread position:
               65-158
               

               Cow position:
               chr1:71636299-71636206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               66-164
               

               Cow position:
               chr1:72356381-72356481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               66-171
               

               Cow position:
               chr1:69378574-69378468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 76
               

               Conread position:
               66-175
               

               Cow position:
               chr1:21957519-21957412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               68, 20
               

               Conread position:
               66-224
               

               Cow position:
               chr1:42353186-42353349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 27
               

               Conread position:
               71-199
               

               Cow position:
               chr1:73867151-73867022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               74-177
               

               Cow position:
               chr1:72811894-72812001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               80-233
               

               Cow position:
               chr1:51968576-51968741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               54, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-147
Cow position:	chr1:81355747-81355596 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	115
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	12, 0
Conread position:	1-149
Cow position:	chr1:79640329-79640179 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	112
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	64, 0
Conread position:	1-151
Cow position:	chr1:85647820-85647671 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	118
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	61, 14
Conread position:	1-153
Cow position:	chr1:25383625-25383781 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	126
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	21, 53
Conread position:	1-154
Cow position:	chr1:12978642-12978796 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	126
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	17, 9
Conread position:	1-156
Cow position:	chr1:78096886-78097043 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	125
Alignm E-value:	7e-33
Alignm gaps (pig, cow):	63, 0
Conread position:	1-157
Cow position:	chr1:89381235-89381392 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	120
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	61, 36
Conread position:	1-158
Cow position:	chr1:35671504-35671657 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	122
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	61, 17
Conread position:	1-159
Cow position:	chr1:83582974-83582814 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	120
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	65, 0
Conread position:	1-160
Cow position:	chr1:3167113-3166954 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	124
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	73, 14
Conread position:	1-162
Cow position:	chr1:12464704-12464542 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	131
Alignm E-value:	9e-35
Alignm gaps (pig, cow):	61, 21
Conread position:	1-163
Cow position:	chr1:86682600-86682443 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	120
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	61, 23
Conread position:	1-164
Cow position:	chr1:7023080-7023247 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	131
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	66, 0
Conread position:	1-168
Cow position:	chr1:89388299-89388474 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	137
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	61, 0
Conread position:	1-171
Cow position:	chr1:61742008-61741837 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	135
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	60, 81
Conread position:	1-177
Cow position:	chr1:91039213-91039036 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	128
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	60, 74
Conread position:	1-190
Cow position:	chr1:53458658-53458844 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	139
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	61, 14
Conread position:	1-196
Cow position:	chr1:8129009-8128807 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	152
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	16, 32
Conread position:	1-199
Cow position:	chr1:33998718-33998923 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	150
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	61, 87
Conread position:	1-205
Cow position:	chr1:89158168-89157950 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	163
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	16, 0