Cow genome map
| Conread name: | OvF4-UMC-p4mm3-005-g07 |
| Conread position: | 1-144 |
| Cow position: | chr21:20183090-20183233 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 1-144 |
| Cow position: | chr21:42540205-42540059 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 1-145 |
| Cow position: | chr21:20260302-20260157 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 1-150 |
| Cow position: | chr21:30835382-30835531 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 62 |
| Conread position: | 1-152 |
| Cow position: | chr21:4280654-4280505 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 1-152 |
| Cow position: | chr21:35354552-35354703 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 1-156 |
| Cow position: | chr21:46264190-46264344 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 133, 21 |
| Conread position: | 1-157 |
| Cow position: | chr21:5392519-5392360 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-158 |
| Cow position: | chr21:829193-829034 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 132 |
| Conread position: | 1-158 |
| Cow position: | chr21:10264051-10264208 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 1-158 |
| Cow position: | chr21:29014543-29014383 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-158 |
| Cow position: | chr21:29069310-29069150 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-158 |
| Cow position: | chr21:33263860-33264021 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-158 |
| Cow position: | chr21:33350759-33350917 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 1-158 |
| Cow position: | chr21:42007444-42007286 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 1-158 |
| Cow position: | chr21:47465102-47464943 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 16, 108 |
| Conread position: | 1-159 |
| Cow position: | chr21:44825872-44825709 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-163 |
| Cow position: | chr21:28626259-28626418 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 1-163 |
| Cow position: | chr21:41590548-41590384 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-164 |
| Cow position: | chr21:868907-868741 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-170 |
| Cow position: | chr21:12801733-12801561 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 17, 156 |
| Conread position: | 1-171 |
| Cow position: | chr21:42135601-42135425 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-199 |
| Cow position: | chr21:41287775-41287564 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 1-220 |
| Cow position: | chr21:24598674-24598902 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 1-225 |
| Cow position: | chr21:12104383-12104617 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 1-227 |
| Cow position: | chr21:27229775-27229537 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 1-229 |
| Cow position: | chr21:22861018-22861252 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 1-231 |
| Cow position: | chr21:8349347-8349592 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 1-232 |
| Cow position: | chr21:8426465-8426714 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 1-233 |
| Cow position: | chr21:20262315-20262075 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 2-130 |
| Cow position: | chr21:46599379-46599508 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 3-158 |
| Cow position: | chr21:41046826-41046982 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 4-165 |
| Cow position: | chr21:13365363-13365525 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 5-133 |
| Cow position: | chr21:16187786-16187657 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 5-158 |
| Cow position: | chr21:724863-724703 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 5-158 |
| Cow position: | chr21:7169709-7169864 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 5-158 |
| Cow position: | chr21:11740098-11739944 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 103 |
| Conread position: | 5-158 |
| Cow position: | chr21:29485002-29485154 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 5-158 |
| Cow position: | chr21:36682345-36682501 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 5-162 |
| Cow position: | chr21:47363714-47363554 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 5-164 |
| Cow position: | chr21:47719278-47719121 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 107 |
| Conread position: | 5-190 |
| Cow position: | chr21:31691506-31691696 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 59, 86 |
| Conread position: | 5-224 |
| Cow position: | chr21:44214148-44214374 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 59, 81 |
| Conread position: | 5-228 |
| Cow position: | chr21:30222366-30222609 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 60 |
| Conread position: | 5-232 |
| Cow position: | chr21:1059102-1059328 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 5-233 |
| Cow position: | chr21:30592284-30592042 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 5-234 |
| Cow position: | chr21:38121122-38121352 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 59, 147 |
| Conread position: | 5-236 |
| Cow position: | chr21:14126310-14126546 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 129, 32 |
| Conread position: | 6-151 |
| Cow position: | chr21:42841575-42841428 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-158 |
| Cow position: | chr21:19360154-19360000 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-158 |
| Cow position: | chr21:27569149-27568997 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 6-158 |
| Cow position: | chr21:29002132-29001981 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 6-165 |
| Cow position: | chr21:37299484-37299645 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-175 |
| Cow position: | chr21:297775-297949 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 6-224 |
| Cow position: | chr21:674707-674931 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 151 |
| Conread position: | 6-224 |
| Cow position: | chr21:15911425-15911641 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 83 |
| Conread position: | 7-158 |
| Cow position: | chr21:9990534-9990686 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 7-225 |
| Cow position: | chr21:742310-742538 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 126, 58 |
| Conread position: | 7-229 |
| Cow position: | chr21:28030313-28030547 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 8-148 |
| Cow position: | chr21:29214136-29213994 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 8-171 |
| Cow position: | chr21:3585344-3585180 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 54, 154 |
| Conread position: | 8-198 |
| Cow position: | chr21:11644939-11644735 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 8-233 |
| Cow position: | chr21:48234142-48233904 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 9-149 |
| Cow position: | chr21:19240848-19240706 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 9-225 |
| Cow position: | chr21:12339666-12339881 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 11-158 |
| Cow position: | chr21:28442756-28442908 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 13-158 |
| Cow position: | chr21:16498548-16498692 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 14-164 |
| Cow position: | chr21:30250170-30250022 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 15-156 |
| Cow position: | chr21:34654104-34654247 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 15-158 |
| Cow position: | chr21:22465223-22465366 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 15-160 |
| Cow position: | chr21:20163739-20163886 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 15-162 |
| Cow position: | chr21:71618-71766 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 15-164 |
| Cow position: | chr21:6051536-6051685 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 15-165 |
| Cow position: | chr21:30990246-30990104 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 15-166 |
| Cow position: | chr21:17252947-17252795 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 63 |
| Conread position: | 15-190 |
| Cow position: | chr21:10673152-10673333 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 15-199 |
| Cow position: | chr21:46451921-46451740 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 15-224 |
| Cow position: | chr21:643357-643583 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 15-224 |
| Cow position: | chr21:31279288-31279516 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 15-225 |
| Cow position: | chr21:32559332-32559107 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 16-164 |
| Cow position: | chr21:21615814-21615964 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-199 |
| Cow position: | chr21:5898370-5898176 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 58 |
| Conread position: | 16-223 |
| Cow position: | chr21:22850954-22851177 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 17-158 |
| Cow position: | chr21:7394253-7394113 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 17-158 |
| Cow position: | chr21:28733879-28733737 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 17-165 |
| Cow position: | chr21:18828269-18828119 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 17-229 |
| Cow position: | chr21:19868921-19868694 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 17-233 |
| Cow position: | chr21:6851205-6851437 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 18-158 |
| Cow position: | chr21:11057843-11057705 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 18-158 |
| Cow position: | chr21:20160710-20160852 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 18-158 |
| Cow position: | chr21:28924143-28924285 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 18-158 |
| Cow position: | chr21:32297485-32297343 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 18-158 |
| Cow position: | chr21:45262776-45262634 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 18-164 |
| Cow position: | chr21:18800505-18800350 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 18-164 |
| Cow position: | chr21:27624731-27624880 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 18-225 |
| Cow position: | chr21:802283-802059 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 19-156 |
| Cow position: | chr21:14452269-14452408 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 19-164 |
| Cow position: | chr21:19258857-19258999 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 19-164 |
| Cow position: | chr21:22014225-22014372 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 46 |
| Conread position: | 19-198 |
| Cow position: | chr21:45971137-45970948 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 45 |
| Conread position: | 20-158 |
| Cow position: | chr21:641623-641763 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 20-158 |
| Cow position: | chr21:24875387-24875529 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 20-158 |
| Cow position: | chr21:36795639-36795779 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 20-158 |
| Cow position: | chr21:39393784-39393925 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 22-145 |
| Cow position: | chr21:7088638-7088764 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 22-158 |
| Cow position: | chr21:28191072-28191208 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 43 |
| Conread position: | 22-163 |
| Cow position: | chr21:33210226-33210370 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 22-233 |
| Cow position: | chr21:11678265-11678051 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 112, 40 |
| Conread position: | 23-158 |
| Cow position: | chr21:30980538-30980402 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 23-225 |
| Cow position: | chr21:28211234-28211436 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 64 |
| Conread position: | 24-164 |
| Cow position: | chr21:13585019-13584879 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 37 |
| Conread position: | 24-164 |
| Cow position: | chr21:42348651-42348514 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 62 |
| Conread position: | 24-198 |
| Cow position: | chr21:33982767-33982583 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 25-164 |
| Cow position: | chr21:31147893-31147752 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 30-158 |
| Cow position: | chr21:7581859-7581729 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 31-158 |
| Cow position: | chr21:5342047-5341918 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 31-158 |
| Cow position: | chr21:32339693-32339564 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 33-164 |
| Cow position: | chr21:30243632-30243498 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 33-232 |
| Cow position: | chr21:16569950-16570160 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 93 |
| Conread position: | 37-158 |
| Cow position: | chr21:5486461-5486335 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 37-226 |
| Cow position: | chr21:25012135-25012343 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 37-233 |
| Cow position: | chr21:82120-82331 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 38-158 |
| Cow position: | chr21:14228226-14228104 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 38-225 |
| Cow position: | chr21:15012493-15012695 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 42-164 |
| Cow position: | chr21:40059086-40059212 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 44-233 |
| Cow position: | chr21:20174378-20174586 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 46-164 |
| Cow position: | chr21:38692262-38692378 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 46-225 |
| Cow position: | chr21:30657932-30658125 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 46-233 |
| Cow position: | chr21:30848879-30848681 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 53-158 |
| Cow position: | chr21:8506477-8506370 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 53-158 |
| Cow position: | chr21:8509365-8509258 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 53-224 |
| Cow position: | chr21:13883550-13883740 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 54-168 |
| Cow position: | chr21:5961847-5961962 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 55-231 |
| Cow position: | chr21:235976-236159 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 66-233 |
| Cow position: | chr21:9710645-9710478 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 20 |
| Conread position: | 84-164 |
| Cow position: | chr21:6603041-6603122 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 73 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 98-232 |
| Cow position: | chr21:12075045-12074907 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 59 |
Show alignments to all cow chromosomes.