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Cow genome map

           
Conread name:
           
OvF4-UMC-p4mm3-005-g07
        

               
Conread position:
               
1-135
               

               
Cow position:
               
chr22:30577464-30577600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr22:22160676-22160815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr22:10669524-10669372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 143
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr22:845853-846007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr22:11613377-11613528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 28
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr22:17852683-17852533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr22:28071509-28071662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr22:877466-877622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:1563300-1563144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:2100995-2100837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:4060994-4060838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:4119612-4119453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:6327819-6327659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:6721128-6720972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:12803435-12803276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:21295774-21295616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 90
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:23440344-23440187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:26141228-26141383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:30998836-30998995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:36433021-36432864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr22:37947675-37947832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr22:1871047-1871210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr22:2403828-2403993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr22:4645725-4645884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr22:9127358-9127525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr22:9171357-9171523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr22:10631336-10631505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr22:30049616-30049451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr22:40048505-40048668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr22:1659113-1659279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr22:4137699-4137535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr22:47555804-47555969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
135, 14
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr22:15568066-15567889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr22:40789517-40789693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr22:28672096-28672299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr22:590289-590484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
61, 163
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr22:12749952-12749745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr22:13300363-13300553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr22:25361438-25361642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr22:31646441-31646648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 196
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr22:4054634-4054407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:4563313-4563553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:30699130-30699362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr22:6215607-6215356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr22:10122329-10122569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr22:12157894-12157643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr22:25742999-25742761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr22:1500841-1501089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 145
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr22:10294989-10295233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr22:22613056-22613307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr22:24066284-24066039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr22:36633176-36633408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr22:4011136-4011281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
2-151
               

               
Cow position:
               
chr22:28146626-28146778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr22:17652386-17652544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr22:19173647-19173811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr22:21397952-21397722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr22:4372990-4373229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
4-171
               

               
Cow position:
               
chr22:21502699-21502869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr22:13957689-13957483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr22:41898494-41898279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr22:12902891-12902746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr22:21890401-21890251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr22:34441678-34441520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
5-159
               

               
Cow position:
               
chr22:12527165-12527012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
5-162
               

               
Cow position:
               
chr22:10161921-10162081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
5-164
               

               
Cow position:
               
chr22:25387281-25387443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
5-190
               

               
Cow position:
               
chr22:5337642-5337461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr22:33985845-33985642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr22:8733382-8733150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr22:864561-864325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr22:38439203-38439053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
6-158
               

               
Cow position:
               
chr22:41982763-41982613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
6-164
               

               
Cow position:
               
chr22:3251037-3250878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr22:32514247-32514409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
6-185
               

               
Cow position:
               
chr22:12341152-12341331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr22:10532456-10532658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
7-158
               

               
Cow position:
               
chr22:3317077-3317229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 111
               

               
Conread position:
               
7-158
               

               
Cow position:
               
chr22:10315036-10315186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
7-199
               

               
Cow position:
               
chr22:19047859-19047667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr22:38115149-38115389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
8-164
               

               
Cow position:
               
chr22:8090571-8090417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
8-164
               

               
Cow position:
               
chr22:8481601-8481759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
9-160
               

               
Cow position:
               
chr22:25221936-25221788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
9-160
               

               
Cow position:
               
chr22:43237450-43237296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
9-170
               

               
Cow position:
               
chr22:17152635-17152797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 147
               

               
Conread position:
               
9-171
               

               
Cow position:
               
chr22:1983808-1983970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr22:644808-644585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
9-225
               

               
Cow position:
               
chr22:243069-243299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
10-151
               

               
Cow position:
               
chr22:12686724-12686584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
10-153
               

               
Cow position:
               
chr22:10936883-10936747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
124, 53
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr22:8324199-8324345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr22:14141383-14141233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr22:18926315-18926465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
10-169
               

               
Cow position:
               
chr22:17764341-17764500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
10-224
               

               
Cow position:
               
chr22:42617959-42618191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
10-225
               

               
Cow position:
               
chr22:17950014-17949780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr22:7967668-7967900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr22:5616263-5616491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
11-158
               

               
Cow position:
               
chr22:32892654-32892803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
11-171
               

               
Cow position:
               
chr22:14638520-14638352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
14-158
               

               
Cow position:
               
chr22:24134361-24134217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
15-153
               

               
Cow position:
               
chr22:23036128-23036268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
15-153
               

               
Cow position:
               
chr22:34930809-34930674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
15-158
               

               
Cow position:
               
chr22:4017441-4017582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
15-158
               

               
Cow position:
               
chr22:10553720-10553576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
15-158
               

               
Cow position:
               
chr22:29185643-29185499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
15-158
               

               
Cow position:
               
chr22:37201813-37201957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
15-158
               

               
Cow position:
               
chr22:43119765-43119620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
15-159
               

               
Cow position:
               
chr22:15950420-15950276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
15-160
               

               
Cow position:
               
chr22:10632880-10633026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
15-164
               

               
Cow position:
               
chr22:3965150-3965301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
15-170
               

               
Cow position:
               
chr22:11458787-11458936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 7
               

               
Conread position:
               
15-171
               

               
Cow position:
               
chr22:10339151-10338995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
119, 50
               

               
Conread position:
               
15-225
               

               
Cow position:
               
chr22:4357055-4357280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
16-158
               

               
Cow position:
               
chr22:34104707-34104563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
16-164
               

               
Cow position:
               
chr22:6176319-6176171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
118, 6
               

               
Conread position:
               
16-199
               

               
Cow position:
               
chr22:2523926-2524115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
16-199
               

               
Cow position:
               
chr22:38320721-38320542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 111
               

               
Conread position:
               
16-223
               

               
Cow position:
               
chr22:534464-534684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
16-231
               

               
Cow position:
               
chr22:9977776-9977998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
16-233
               

               
Cow position:
               
chr22:11344475-11344690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
17-154
               

               
Cow position:
               
chr22:31195021-31195160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
17-158
               

               
Cow position:
               
chr22:26056899-26056756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
17-164
               

               
Cow position:
               
chr22:21235465-21235317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
17-233
               

               
Cow position:
               
chr22:18838218-18838455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
17-234
               

               
Cow position:
               
chr22:10416194-10416433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
18-156
               

               
Cow position:
               
chr22:15090710-15090849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
18-157
               

               
Cow position:
               
chr22:14214399-14214258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
18-158
               

               
Cow position:
               
chr22:18967191-18967052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
120, 37
               

               
Conread position:
               
18-158
               

               
Cow position:
               
chr22:21355174-21355032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
18-160
               

               
Cow position:
               
chr22:1977716-1977861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
18-164
               

               
Cow position:
               
chr22:27740859-27741005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
119, 43
               

               
Conread position:
               
18-164
               

               
Cow position:
               
chr22:43397969-43398117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
18-177
               

               
Cow position:
               
chr22:14381626-14381791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
18-199
               

               
Cow position:
               
chr22:14509510-14509326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
18-224
               

               
Cow position:
               
chr22:14754971-14755183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
18-226
               

               
Cow position:
               
chr22:8357551-8357776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
18-226
               

               
Cow position:
               
chr22:40071947-40072159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
19-151
               

               
Cow position:
               
chr22:28704152-28704286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
19-158
               

               
Cow position:
               
chr22:4149390-4149528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
19-158
               

               
Cow position:
               
chr22:30253168-30253312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
19-199
               

               
Cow position:
               
chr22:3227361-3227538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
19-220
               

               
Cow position:
               
chr22:21421085-21421281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 69
               

               
Conread position:
               
21-160
               

               
Cow position:
               
chr22:1590994-1591135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
22-156
               

               
Cow position:
               
chr22:24063061-24063199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
22-158
               

               
Cow position:
               
chr22:10285936-10286079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
22-158
               

               
Cow position:
               
chr22:14691000-14690862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
22-160
               

               
Cow position:
               
chr22:1838279-1838421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
22-162
               

               
Cow position:
               
chr22:7832383-7832240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
22-163
               

               
Cow position:
               
chr22:6709821-6709676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
22-164
               

               
Cow position:
               
chr22:2623547-2623403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
22-164
               

               
Cow position:
               
chr22:29290167-29290028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
22-199
               

               
Cow position:
               
chr22:35029240-35029424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
22-225
               

               
Cow position:
               
chr22:27171295-27171072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
22-225
               

               
Cow position:
               
chr22:34735835-34736045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 124
               

               
Conread position:
               
23-158
               

               
Cow position:
               
chr22:4163951-4164087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
23-158
               

               
Cow position:
               
chr22:8412498-8412637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
23-164
               

               
Cow position:
               
chr22:8710399-8710258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
23-231
               

               
Cow position:
               
chr22:30818185-30818412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
24-159
               

               
Cow position:
               
chr22:12974195-12974060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
28-189
               

               
Cow position:
               
chr22:21905449-21905620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
30-158
               

               
Cow position:
               
chr22:3950231-3950361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
31-158
               

               
Cow position:
               
chr22:10323860-10323989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
31-158
               

               
Cow position:
               
chr22:31510400-31510269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
32-171
               

               
Cow position:
               
chr22:4012500-4012636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
32-226
               

               
Cow position:
               
chr22:23277336-23277536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
32-233
               

               
Cow position:
               
chr22:23249748-23249537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
33-199
               

               
Cow position:
               
chr22:19645611-19645442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
33-233
               

               
Cow position:
               
chr22:33485634-33485420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
34-224
               

               
Cow position:
               
chr22:44741059-44741266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 162
               

               
Conread position:
               
37-157
               

               
Cow position:
               
chr22:25539985-25540107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
37-164
               

               
Cow position:
               
chr22:17294950-17294820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
39-164
               

               
Cow position:
               
chr22:28665271-28665398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
39-224
               

               
Cow position:
               
chr22:11389600-11389423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
41-164
               

               
Cow position:
               
chr22:8327736-8327859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
43-156
               

               
Cow position:
               
chr22:26233624-26233739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-158
               

               
Cow position:
               
chr22:22606217-22606334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-199
               

               
Cow position:
               
chr22:7086560-7086406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
43-233
               

               
Cow position:
               
chr22:24071655-24071453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
46-233
               

               
Cow position:
               
chr22:6360189-6359989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 190
               

               
Conread position:
               
46-233
               

               
Cow position:
               
chr22:9735268-9735474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
49-160
               

               
Cow position:
               
chr22:45684040-45683927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
50-224
               

               
Cow position:
               
chr22:6372347-6372164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
51-198
               

               
Cow position:
               
chr22:2110451-2110593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
51-233
               

               
Cow position:
               
chr22:26188870-26189077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
52-154
               

               
Cow position:
               
chr22:28649718-28649614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
54-153
               

               
Cow position:
               
chr22:749410-749309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
54-158
               

               
Cow position:
               
chr22:7518558-7518664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
56-171
               

               
Cow position:
               
chr22:14482528-14482413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 62
               

               
Conread position:
               
57-158
               

               
Cow position:
               
chr22:31308891-31308993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
63-224
               

               
Cow position:
               
chr22:1384095-1384269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
64-199
               

               
Cow position:
               
chr22:20472348-20472208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
65-164
               

               
Cow position:
               
chr22:3997768-3997868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
66-158
               

               
Cow position:
               
chr22:44263391-44263484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
73-233
               

               
Cow position:
               
chr22:2201763-2201940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
75-233
               

               
Cow position:
               
chr22:3388766-3388933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
79-233
               

               
Cow position:
               
chr22:19548884-19549046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
82-226
               

               
Cow position:
               
chr22:26945528-26945373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
88-224
               

               
Cow position:
               
chr22:12446679-12446535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               
Show alignments to all cow chromosomes.