Cow genome map
| Conread name: | OvF4-UMC-p4mm3-005-g07 |
| Conread position: | 1-146 |
| Cow position: | chr28:25128844-25128991 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 1-151 |
| Cow position: | chr28:5128771-5128618 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-153 |
| Cow position: | chr28:14998025-14998178 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 144 |
| Conread position: | 1-155 |
| Cow position: | chr28:2862825-2862982 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-156 |
| Cow position: | chr28:34133820-34133976 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 1-157 |
| Cow position: | chr28:5684666-5684818 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 1-158 |
| Cow position: | chr28:777632-777793 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-158 |
| Cow position: | chr28:2960873-2960713 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-158 |
| Cow position: | chr28:7498189-7498030 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-158 |
| Cow position: | chr28:8787500-8787656 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 1-158 |
| Cow position: | chr28:11079267-11079418 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 123, 12 |
| Conread position: | 1-158 |
| Cow position: | chr28:13474261-13474417 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 1-158 |
| Cow position: | chr28:16211143-16210984 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 1-158 |
| Cow position: | chr28:21868416-21868574 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 1-158 |
| Cow position: | chr28:24966345-24966504 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 54 |
| Conread position: | 1-158 |
| Cow position: | chr28:26220216-26220374 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 108 |
| Conread position: | 1-158 |
| Cow position: | chr28:28164047-28164201 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 133, 90 |
| Conread position: | 1-163 |
| Cow position: | chr28:12070195-12070354 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 1-163 |
| Cow position: | chr28:25596587-25596750 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 88 |
| Conread position: | 1-164 |
| Cow position: | chr28:11752182-11752016 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-164 |
| Cow position: | chr28:34561306-34561466 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 79 |
| Conread position: | 1-169 |
| Cow position: | chr28:11527300-11527132 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 1-171 |
| Cow position: | chr28:33884361-33884533 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 1-173 |
| Cow position: | chr28:7549099-7548927 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 1-199 |
| Cow position: | chr28:1099701-1099504 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 133, 36 |
| Conread position: | 1-199 |
| Cow position: | chr28:3411031-3410816 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-199 |
| Cow position: | chr28:10964382-10964579 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 133, 17 |
| Conread position: | 1-223 |
| Cow position: | chr28:7927136-7927364 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 1-224 |
| Cow position: | chr28:134110-133876 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-224 |
| Cow position: | chr28:5074549-5074317 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 1-224 |
| Cow position: | chr28:11884559-11884327 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 1-224 |
| Cow position: | chr28:32365803-32366022 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 1-225 |
| Cow position: | chr28:5139036-5138794 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 12, 67 |
| Conread position: | 1-225 |
| Cow position: | chr28:11426581-11426343 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 1-226 |
| Cow position: | chr28:2762154-2762378 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 1-229 |
| Cow position: | chr28:2131966-2131733 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 1-233 |
| Cow position: | chr28:10589063-10588820 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-233 |
| Cow position: | chr28:10977803-10978051 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 1-233 |
| Cow position: | chr28:21844916-21845164 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 2-158 |
| Cow position: | chr28:11422854-11422699 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 2-169 |
| Cow position: | chr28:4438671-4438843 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 2-197 |
| Cow position: | chr28:22813221-22813419 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 131, 58 |
| Conread position: | 2-225 |
| Cow position: | chr28:17949154-17948912 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-153 |
| Cow position: | chr28:4179516-4179663 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 130, 58 |
| Conread position: | 4-171 |
| Cow position: | chr28:29199693-29199860 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 5-158 |
| Cow position: | chr28:33051997-33052153 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 41, 144 |
| Conread position: | 5-165 |
| Cow position: | chr28:12619539-12619698 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 5-166 |
| Cow position: | chr28:8022138-8021978 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 5-168 |
| Cow position: | chr28:4834882-4834718 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 115 |
| Conread position: | 5-168 |
| Cow position: | chr28:7865291-7865455 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 5-176 |
| Cow position: | chr28:3169224-3169054 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 5-199 |
| Cow position: | chr28:33163498-33163303 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 66 |
| Conread position: | 6-147 |
| Cow position: | chr28:2872882-2873025 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 6-158 |
| Cow position: | chr28:4158918-4159072 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-158 |
| Cow position: | chr28:8140447-8140599 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 6-158 |
| Cow position: | chr28:10863821-10863675 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 128, 56 |
| Conread position: | 6-158 |
| Cow position: | chr28:17739788-17739939 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 6-208 |
| Cow position: | chr28:7805459-7805257 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 6-224 |
| Cow position: | chr28:30937704-30937479 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 6-225 |
| Cow position: | chr28:7619187-7618955 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-229 |
| Cow position: | chr28:3023952-3023707 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 6-234 |
| Cow position: | chr28:24082233-24082479 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-158 |
| Cow position: | chr28:4873381-4873228 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 74 |
| Conread position: | 7-224 |
| Cow position: | chr28:29416752-29416521 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 8-153 |
| Cow position: | chr28:15043896-15043750 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 8-233 |
| Cow position: | chr28:11816702-11816470 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 9-158 |
| Cow position: | chr28:4181968-4182118 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 10-158 |
| Cow position: | chr28:9636489-9636340 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 10-158 |
| Cow position: | chr28:22332497-22332645 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 10-225 |
| Cow position: | chr28:7350621-7350855 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 10-233 |
| Cow position: | chr28:3275461-3275681 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 11-158 |
| Cow position: | chr28:4361482-4361334 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 128 |
| Conread position: | 11-226 |
| Cow position: | chr28:21008696-21008465 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 14-158 |
| Cow position: | chr28:10775741-10775594 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 8 |
| Conread position: | 14-158 |
| Cow position: | chr28:32179667-32179810 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 14-198 |
| Cow position: | chr28:16346560-16346364 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 15-120 |
| Cow position: | chr28:17393748-17393855 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 15-157 |
| Cow position: | chr28:20124756-20124901 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 15-158 |
| Cow position: | chr28:3492811-3492667 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 15-158 |
| Cow position: | chr28:4013056-4013201 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 15-158 |
| Cow position: | chr28:5254845-5254991 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 15-158 |
| Cow position: | chr28:11348396-11348539 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 15-158 |
| Cow position: | chr28:26531304-26531162 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 15-164 |
| Cow position: | chr28:22148043-22147891 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 15-171 |
| Cow position: | chr28:19026033-19025873 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 15-171 |
| Cow position: | chr28:20759728-20759572 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 15-171 |
| Cow position: | chr28:29434456-29434296 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 15-175 |
| Cow position: | chr28:12991108-12991276 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 15-224 |
| Cow position: | chr28:4070939-4071162 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 52, 104 |
| Conread position: | 15-224 |
| Cow position: | chr28:26719316-26719534 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 15-225 |
| Cow position: | chr28:5204167-5204390 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 15-229 |
| Cow position: | chr28:3746170-3746406 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 7 |
| Conread position: | 15-233 |
| Cow position: | chr28:6975213-6975447 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 16-158 |
| Cow position: | chr28:9705626-9705767 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 16-158 |
| Cow position: | chr28:26743598-26743743 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 16-164 |
| Cow position: | chr28:25806544-25806698 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 16-164 |
| Cow position: | chr28:34248056-34247908 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 16-190 |
| Cow position: | chr28:19564255-19564071 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-199 |
| Cow position: | chr28:16919197-16919001 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 16-224 |
| Cow position: | chr28:30746757-30746534 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 179 |
| Conread position: | 16-233 |
| Cow position: | chr28:5205244-5205467 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 47, 165 |
| Conread position: | 18-154 |
| Cow position: | chr28:16204359-16204222 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 18-162 |
| Cow position: | chr28:5817815-5817963 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 18-176 |
| Cow position: | chr28:7267967-7267807 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 18-199 |
| Cow position: | chr28:7132111-7131918 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 18-199 |
| Cow position: | chr28:21598277-21598097 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 18-222 |
| Cow position: | chr28:25056941-25057158 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 107 |
| Conread position: | 18-225 |
| Cow position: | chr28:11987149-11987368 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 18-225 |
| Cow position: | chr28:12055387-12055606 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 79 |
| Conread position: | 18-232 |
| Cow position: | chr28:9740441-9740670 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 18-233 |
| Cow position: | chr28:3740851-3741072 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 193 |
| Conread position: | 18-233 |
| Cow position: | chr28:4809754-4809983 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 18-233 |
| Cow position: | chr28:11585227-11584996 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-156 |
| Cow position: | chr28:26922392-26922253 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 19-158 |
| Cow position: | chr28:7372146-7372005 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 19-158 |
| Cow position: | chr28:22345997-22346138 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 19-172 |
| Cow position: | chr28:27161350-27161194 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 90 |
| Conread position: | 19-223 |
| Cow position: | chr28:26614849-26615056 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 136 |
| Conread position: | 19-233 |
| Cow position: | chr28:4884278-4884040 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 20-152 |
| Cow position: | chr28:8408711-8408847 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 20-158 |
| Cow position: | chr28:16370106-16369966 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 50, 45 |
| Conread position: | 20-164 |
| Cow position: | chr28:11828979-11828837 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 22-158 |
| Cow position: | chr28:8149653-8149515 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 22-158 |
| Cow position: | chr28:8304226-8304364 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 22-164 |
| Cow position: | chr28:10172437-10172294 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 22-225 |
| Cow position: | chr28:4016510-4016728 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 22-233 |
| Cow position: | chr28:24646572-24646796 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 114, 43 |
| Conread position: | 23-166 |
| Cow position: | chr28:18591251-18591395 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 23-199 |
| Cow position: | chr28:3914696-3914878 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 23-222 |
| Cow position: | chr28:25249334-25249537 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 24-165 |
| Cow position: | chr28:11016389-11016533 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 24-189 |
| Cow position: | chr28:6059489-6059325 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 138 |
| Conread position: | 24-199 |
| Cow position: | chr28:4101501-4101685 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 25-153 |
| Cow position: | chr28:4823586-4823714 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 112 |
| Conread position: | 26-199 |
| Cow position: | chr28:3143892-3143712 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 27-164 |
| Cow position: | chr28:3397213-3397079 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 31-233 |
| Cow position: | chr28:29850827-29850609 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 32-165 |
| Cow position: | chr28:3147471-3147603 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 34-232 |
| Cow position: | chr28:5805662-5805874 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 31 |
| Conread position: | 34-233 |
| Cow position: | chr28:8396326-8396538 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 28, 154 |
| Conread position: | 37-158 |
| Cow position: | chr28:32358102-32358224 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 37-175 |
| Cow position: | chr28:16879567-16879709 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 37-208 |
| Cow position: | chr28:25675511-25675344 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 25, 117 |
| Conread position: | 39-158 |
| Cow position: | chr28:6971352-6971231 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 39-229 |
| Cow position: | chr28:30902122-30902330 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 42-233 |
| Cow position: | chr28:4876442-4876651 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 43-158 |
| Cow position: | chr28:7557734-7557617 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 44-224 |
| Cow position: | chr28:24996612-24996414 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 44-234 |
| Cow position: | chr28:26784240-26784042 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 46-171 |
| Cow position: | chr28:4051201-4051328 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 48-158 |
| Cow position: | chr28:10212422-10212310 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 49-199 |
| Cow position: | chr28:9109222-9109384 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 51-229 |
| Cow position: | chr28:10890727-10890533 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 65-199 |
| Cow position: | chr28:3678385-3678532 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 67-165 |
| Cow position: | chr28:2151415-2151316 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 73-232 |
| Cow position: | chr28:26868120-26867943 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 168 |
| Conread position: | 92-225 |
| Cow position: | chr28:24238427-24238279 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.