Cow genome map
| Conread name: | OvF4-UMC-p4mm3-005-g07 |
| Conread position: | 1-121 |
| Cow position: | chr6:12197172-12197294 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-128 |
| Cow position: | chr6:63762875-63762748 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 1-137 |
| Cow position: | chr6:23247970-23247836 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 1-150 |
| Cow position: | chr6:35613429-35613273 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-153 |
| Cow position: | chr6:6965403-6965253 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 133, 36 |
| Conread position: | 1-153 |
| Cow position: | chr6:36202813-36202966 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 1-153 |
| Cow position: | chr6:36920981-36920830 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 74 |
| Conread position: | 1-153 |
| Cow position: | chr6:51581260-51581109 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 1-153 |
| Cow position: | chr6:60350299-60350145 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-158 |
| Cow position: | chr6:6400946-6401102 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 16, 87 |
| Conread position: | 1-158 |
| Cow position: | chr6:18904058-18903900 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 1-158 |
| Cow position: | chr6:47520045-47520205 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-158 |
| Cow position: | chr6:49437327-49437485 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 1-158 |
| Cow position: | chr6:53090002-53090160 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 146 |
| Conread position: | 1-158 |
| Cow position: | chr6:59770222-59770375 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 1-158 |
| Cow position: | chr6:60274017-60273857 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 1-158 |
| Cow position: | chr6:60516821-60516977 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 1-158 |
| Cow position: | chr6:61269305-61269464 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 145 |
| Conread position: | 1-158 |
| Cow position: | chr6:62056607-62056766 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-158 |
| Cow position: | chr6:67451378-67451219 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-162 |
| Cow position: | chr6:143377-143218 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 1-162 |
| Cow position: | chr6:17068654-17068491 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 1-162 |
| Cow position: | chr6:52478419-52478255 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-163 |
| Cow position: | chr6:18118057-18117893 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 76 |
| Conread position: | 1-164 |
| Cow position: | chr6:5609451-5609289 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 1-164 |
| Cow position: | chr6:7128411-7128244 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 143 |
| Conread position: | 1-164 |
| Cow position: | chr6:51463641-51463477 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 1-171 |
| Cow position: | chr6:2078825-2078650 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-171 |
| Cow position: | chr6:38640226-38640400 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-171 |
| Cow position: | chr6:63065820-63065995 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 1-189 |
| Cow position: | chr6:20929520-20929331 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 65, 123 |
| Conread position: | 1-199 |
| Cow position: | chr6:32121900-32122103 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-224 |
| Cow position: | chr6:53024811-53024572 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-234 |
| Cow position: | chr6:21293502-21293248 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 2-133 |
| Cow position: | chr6:15022552-15022421 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 2-170 |
| Cow position: | chr6:8788041-8787873 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 2-199 |
| Cow position: | chr6:34119358-34119155 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 2-224 |
| Cow position: | chr6:54082995-54082775 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 2-224 |
| Cow position: | chr6:66570432-66570664 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-153 |
| Cow position: | chr6:3351023-3351175 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 3-158 |
| Cow position: | chr6:46283008-46282852 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 3-190 |
| Cow position: | chr6:8966095-8966287 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 4-158 |
| Cow position: | chr6:67643695-67643539 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 5-153 |
| Cow position: | chr6:32853184-32853334 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 5-153 |
| Cow position: | chr6:58459721-58459867 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 5-158 |
| Cow position: | chr6:35842655-35842809 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 5-158 |
| Cow position: | chr6:47339358-47339204 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 5-158 |
| Cow position: | chr6:67950952-67951101 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 133, 59 |
| Conread position: | 5-162 |
| Cow position: | chr6:58597508-58597348 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 5-164 |
| Cow position: | chr6:48468999-48469158 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 5-164 |
| Cow position: | chr6:59603209-59603050 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 5-171 |
| Cow position: | chr6:57546224-57546064 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 129, 57 |
| Conread position: | 6-158 |
| Cow position: | chr6:46860169-46860016 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 6-158 |
| Cow position: | chr6:48112197-48112348 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 6-162 |
| Cow position: | chr6:51969076-51969232 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 6-164 |
| Cow position: | chr6:14958345-14958182 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 6-164 |
| Cow position: | chr6:38207491-38207332 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 6-165 |
| Cow position: | chr6:39358347-39358182 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 6-199 |
| Cow position: | chr6:7119620-7119422 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 6-199 |
| Cow position: | chr6:19259344-19259150 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 62, 156 |
| Conread position: | 6-199 |
| Cow position: | chr6:21736888-21736694 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 6-199 |
| Cow position: | chr6:63720198-63720400 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 6-199 |
| Cow position: | chr6:68685553-68685748 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 128, 9 |
| Conread position: | 6-224 |
| Cow position: | chr6:53546034-53546268 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 7-158 |
| Cow position: | chr6:10105980-10105827 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-158 |
| Cow position: | chr6:37332106-37332262 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-162 |
| Cow position: | chr6:37634790-37634951 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 7-225 |
| Cow position: | chr6:23695999-23696234 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 7-225 |
| Cow position: | chr6:29210496-29210717 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 151, 44 |
| Conread position: | 7-225 |
| Cow position: | chr6:44194550-44194316 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 7-225 |
| Cow position: | chr6:48097605-48097363 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 7-233 |
| Cow position: | chr6:22985856-22985619 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 8-160 |
| Cow position: | chr6:21869649-21869494 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 8-198 |
| Cow position: | chr6:65871037-65871238 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 54, 99 |
| Conread position: | 8-225 |
| Cow position: | chr6:32287639-32287871 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 9-164 |
| Cow position: | chr6:9302718-9302560 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 10-158 |
| Cow position: | chr6:23466031-23465882 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 52, 82 |
| Conread position: | 11-157 |
| Cow position: | chr6:19264495-19264348 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 11-233 |
| Cow position: | chr6:66839201-66839443 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 122, 75 |
| Conread position: | 14-175 |
| Cow position: | chr6:1871192-1871029 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 15-157 |
| Cow position: | chr6:57571486-57571630 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 15-158 |
| Cow position: | chr6:29485089-29485235 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 15-158 |
| Cow position: | chr6:58725377-58725520 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 15-158 |
| Cow position: | chr6:60144188-60144046 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 15-158 |
| Cow position: | chr6:67806007-67805863 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 15-164 |
| Cow position: | chr6:31078869-31078711 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 15-167 |
| Cow position: | chr6:60266174-60266022 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 15-168 |
| Cow position: | chr6:9736649-9736499 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 15-190 |
| Cow position: | chr6:38771292-38771470 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 63 |
| Conread position: | 15-196 |
| Cow position: | chr6:21231532-21231717 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 51, 8 |
| Conread position: | 15-198 |
| Cow position: | chr6:47885015-47884838 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 123, 8 |
| Conread position: | 15-199 |
| Cow position: | chr6:4383487-4383682 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 15-199 |
| Cow position: | chr6:24031386-24031571 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 15-199 |
| Cow position: | chr6:28999933-28999749 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 15-225 |
| Cow position: | chr6:899286-899081 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 122 |
| Conread position: | 15-225 |
| Cow position: | chr6:60468246-60468471 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 15-233 |
| Cow position: | chr6:20196291-20196083 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 185, 7 |
| Conread position: | 16-158 |
| Cow position: | chr6:61524197-61524053 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 16-163 |
| Cow position: | chr6:13040449-13040596 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 16-225 |
| Cow position: | chr6:30023893-30024117 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 16-233 |
| Cow position: | chr6:26450322-26450542 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 122, 49 |
| Conread position: | 16-233 |
| Cow position: | chr6:50504464-50504705 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 16-233 |
| Cow position: | chr6:53460559-53460323 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 17-153 |
| Cow position: | chr6:12551279-12551417 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 17-158 |
| Cow position: | chr6:15243264-15243407 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 17-158 |
| Cow position: | chr6:17414438-17414293 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 17-158 |
| Cow position: | chr6:54471922-54471780 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 72 |
| Conread position: | 17-158 |
| Cow position: | chr6:61569641-61569781 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 70 |
| Conread position: | 17-199 |
| Cow position: | chr6:49398610-49398421 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 18-158 |
| Cow position: | chr6:37395391-37395248 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 18-164 |
| Cow position: | chr6:47799303-47799453 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 18-165 |
| Cow position: | chr6:28977029-28976881 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 18-167 |
| Cow position: | chr6:61168765-61168916 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 18-199 |
| Cow position: | chr6:9008602-9008418 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 18-220 |
| Cow position: | chr6:61575834-61576040 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 39 |
| Conread position: | 18-232 |
| Cow position: | chr6:37463032-37463247 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 139 |
| Conread position: | 18-233 |
| Cow position: | chr6:18955065-18954843 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 19-158 |
| Cow position: | chr6:1002252-1002111 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 19-158 |
| Cow position: | chr6:53652052-53652192 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 19-158 |
| Cow position: | chr6:54867528-54867669 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 19-158 |
| Cow position: | chr6:54990991-54990849 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 19-225 |
| Cow position: | chr6:120258-120477 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 19-225 |
| Cow position: | chr6:24468384-24468159 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 19-232 |
| Cow position: | chr6:46465832-46466063 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 219 |
| Conread position: | 19-233 |
| Cow position: | chr6:21470418-21470182 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 19-233 |
| Cow position: | chr6:45690599-45690371 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 206 |
| Conread position: | 20-196 |
| Cow position: | chr6:37466103-37466282 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 21-149 |
| Cow position: | chr6:20097946-20097816 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 21-164 |
| Cow position: | chr6:9452757-9452610 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 21-164 |
| Cow position: | chr6:55282281-55282134 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 22-152 |
| Cow position: | chr6:57328379-57328248 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 22-158 |
| Cow position: | chr6:6343440-6343582 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 22-158 |
| Cow position: | chr6:46571120-46571257 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 22-158 |
| Cow position: | chr6:60740028-60740166 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 22-158 |
| Cow position: | chr6:66375319-66375181 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 22-169 |
| Cow position: | chr6:47640418-47640272 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 40, 129 |
| Conread position: | 22-177 |
| Cow position: | chr6:63047606-63047762 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 140 |
| Conread position: | 22-197 |
| Cow position: | chr6:56715831-56716014 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 22-209 |
| Cow position: | chr6:37783414-37783606 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 171 |
| Conread position: | 22-224 |
| Cow position: | chr6:26728517-26728305 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 22-229 |
| Cow position: | chr6:1941818-1941590 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 22-229 |
| Cow position: | chr6:47574920-47575135 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 23-153 |
| Cow position: | chr6:18422975-18422844 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 23-199 |
| Cow position: | chr6:12623530-12623717 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 23-225 |
| Cow position: | chr6:43651767-43651964 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 129 |
| Conread position: | 24-161 |
| Cow position: | chr6:29248496-29248632 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 32-225 |
| Cow position: | chr6:16090928-16091137 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 33-158 |
| Cow position: | chr6:2547280-2547407 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 33-163 |
| Cow position: | chr6:58590298-58590431 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 35-158 |
| Cow position: | chr6:41657294-41657419 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 37-199 |
| Cow position: | chr6:51933583-51933747 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 39-164 |
| Cow position: | chr6:60516656-60516782 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 39-233 |
| Cow position: | chr6:23938091-23938299 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 40-224 |
| Cow position: | chr6:41226798-41226608 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 44-233 |
| Cow position: | chr6:69145395-69145591 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 50-158 |
| Cow position: | chr6:28900368-28900478 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 51-163 |
| Cow position: | chr6:25773173-25773061 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 65-162 |
| Cow position: | chr6:14896976-14896878 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 75-224 |
| Cow position: | chr6:43540182-43540023 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.