Non-Coding RNA Search

Cow genome map


           Conread name:
           OvF4-UMC-p4mm3-008-a09
        

               Conread position:
               1-177
               

               Cow position:
               chr1:54179346-54179535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-178
               

               Cow position:
               chr1:76938323-76938137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr1:37887112-37886910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               42, 76
               

               Conread position:
               1-199
               

               Cow position:
               chr1:50032321-50032529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-206
               

               Cow position:
               chr1:44836558-44836345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               48, 188
               

               Conread position:
               1-210
               

               Cow position:
               chr1:25183797-25184023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-210
               

               Cow position:
               chr1:89834909-89835122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               48, 100
               

               Conread position:
               1-219
               

               Cow position:
               chr1:67577739-67577970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 188
               

               Conread position:
               1-221
               

               Cow position:
               chr1:82880339-82880568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               1-224
               

               Cow position:
               chr1:53650581-53650800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               156, 50
               

               Conread position:
               1-224
               

               Cow position:
               chr1:100790234-100790010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 147
               

               Conread position:
               1-225
               

               Cow position:
               chr1:70828580-70828809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 123
               

               Conread position:
               1-231
               

               Cow position:
               chr1:51983270-51983497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               48, 91
               

               Conread position:
               1-239
               

               Cow position:
               chr1:16856000-16855770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-241
               

               Cow position:
               chr1:11226571-11226317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 100
               

               Conread position:
               1-242
               

               Cow position:
               chr1:73756770-73757012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               44, 7
               

               Conread position:
               1-243
               

               Cow position:
               chr1:53397658-53397916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-244
               

               Cow position:
               chr1:15547143-15547396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               48, 101
               

               Conread position:
               1-244
               

               Cow position:
               chr1:64928931-64928675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-248
               

               Cow position:
               chr1:31548512-31548769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               1-248
               

               Cow position:
               chr1:52039311-52039566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 101
               

               Conread position:
               1-248
               

               Cow position:
               chr1:85774138-85774390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               48, 192
               

               Conread position:
               1-250
               

               Cow position:
               chr1:80336576-80336305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-252
               

               Cow position:
               chr1:54258246-54258498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 168
               

               Conread position:
               1-252
               

               Cow position:
               chr1:61725439-61725178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 229
               

               Conread position:
               1-252
               

               Cow position:
               chr1:63240626-63240882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               48, 93
               

               Conread position:
               1-252
               

               Cow position:
               chr1:88970753-88970993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               204, 24
               

               Conread position:
               1-254
               

               Cow position:
               chr1:732251-731998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 179
               

               Conread position:
               1-254
               

               Cow position:
               chr1:38278358-38278098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               185, 45
               

               Conread position:
               1-255
               

               Cow position:
               chr1:24202062-24201810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               45, 153
               

               Conread position:
               1-255
               

               Cow position:
               chr1:57639836-57639585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               100, 50
               

               Conread position:
               1-256
               

               Cow position:
               chr1:3323528-3323809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-256
               

               Cow position:
               chr1:11914198-11913939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               67, 50
               

               Conread position:
               1-256
               

               Cow position:
               chr1:24909417-24909150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               43, 94
               

               Conread position:
               1-256
               

               Cow position:
               chr1:30034223-30034480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 116
               

               Conread position:
               1-256
               

               Cow position:
               chr1:61735768-61735494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-256
               

               Cow position:
               chr1:68282468-68282740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-256
               

               Cow position:
               chr1:68854856-68855106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 48
               

               Conread position:
               1-256
               

               Cow position:
               chr1:71691488-71691757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               44, 224
               

               Conread position:
               1-256
               

               Cow position:
               chr1:71797223-71796970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 157
               

               Conread position:
               1-256
               

               Cow position:
               chr1:86113739-86113467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 155
               

               Conread position:
               1-256
               

               Cow position:
               chr1:96136176-96136424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               89, 45
               

               Conread position:
               1-257
               

               Cow position:
               chr1:22826841-22827106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 177
               

               Conread position:
               1-257
               

               Cow position:
               chr1:83082679-83082944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               1-257
               

               Cow position:
               chr1:100400524-100400257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               48, 98
               

               Conread position:
               1-258
               

               Cow position:
               chr1:8349633-8349375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               43, 172
               

               Conread position:
               1-258
               

               Cow position:
               chr1:33547465-33547194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 168
               

               Conread position:
               1-258
               

               Cow position:
               chr1:62963957-62964217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 158
               

               Conread position:
               1-258
               

               Cow position:
               chr1:63596385-63596114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               1-258
               

               Cow position:
               chr1:77462040-77462300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 136
               

               Conread position:
               1-258
               

               Cow position:
               chr1:81290195-81290447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 145
               

               Conread position:
               1-259
               

               Cow position:
               chr1:82504641-82504915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 101
               

               Conread position:
               1-260
               

               Cow position:
               chr1:23969361-23969095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               48, 186
               

               Conread position:
               1-260
               

               Cow position:
               chr1:36997871-36998137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               45, 99
               

               Conread position:
               1-260
               

               Cow position:
               chr1:52329853-52329587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               39, 78
               

               Conread position:
               1-260
               

               Cow position:
               chr1:68253265-68253533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 189
               

               Conread position:
               1-260
               

               Cow position:
               chr1:71946690-71946433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 95
               

               Conread position:
               1-260
               

               Cow position:
               chr1:90868764-90868499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 154
               

               Conread position:
               1-260
               

               Cow position:
               chr1:95017837-95017577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               1-260
               

               Cow position:
               chr1:99642689-99642424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-260
               

               Cow position:
               chr1:100771060-100770807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               48, 83
               

               Conread position:
               1-260
               

               Cow position:
               chr1:101547363-101547091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-260
               

               Cow position:
               chr1:101822823-101822559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 111
               

               Conread position:
               1-262
               

               Cow position:
               chr1:61350827-61351098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-263
               

               Cow position:
               chr1:84170176-84170429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 98
               

               Conread position:
               1-264
               

               Cow position:
               chr1:3167392-3167124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               47, 88
               

               Conread position:
               1-264
               

               Cow position:
               chr1:17653183-17653445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               48, 144
               

               Conread position:
               1-264
               

               Cow position:
               chr1:52753492-52753218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 271
               

               Conread position:
               1-265
               

               Cow position:
               chr1:7350212-7350489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr1:14240132-14239860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 137
               

               Conread position:
               1-265
               

               Cow position:
               chr1:18196530-18196808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               45, 131
               

               Conread position:
               1-265
               

               Cow position:
               chr1:31765720-31765440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               1-265
               

               Cow position:
               chr1:52496450-52496730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr1:53495136-53495415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr1:56140459-56140182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 77
               

               Conread position:
               1-265
               

               Cow position:
               chr1:56225152-56225413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               48, 94
               

               Conread position:
               1-265
               

               Cow position:
               chr1:70053402-70053676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 194
               

               Conread position:
               1-265
               

               Cow position:
               chr1:79590774-79591054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr1:80869780-80870062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr1:81569362-81569084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr1:96184334-96184072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 150
               

               Conread position:
               1-266
               

               Cow position:
               chr1:4026862-4027140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               48, 90
               

               Conread position:
               1-266
               

               Cow position:
               chr1:5873299-5873023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr1:12222931-12222656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr1:21131409-21131147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 160
               

               Conread position:
               1-266
               

               Cow position:
               chr1:21786997-21787278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr1:24235844-24235569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               41, 100
               

               Conread position:
               1-266
               

               Cow position:
               chr1:26702523-26702259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               48, 99
               

               Conread position:
               1-266
               

               Cow position:
               chr1:28176688-28176957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               158, 49
               

               Conread position:
               1-266
               

               Cow position:
               chr1:31646888-31647157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 175
               

               Conread position:
               1-266
               

               Cow position:
               chr1:36879952-36880227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               44, 199
               

               Conread position:
               1-266
               

               Cow position:
               chr1:39418444-39418173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               48, 164
               

               Conread position:
               1-266
               

               Cow position:
               chr1:43352975-43352710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 95
               

               Conread position:
               1-266
               

               Cow position:
               chr1:44136777-44136518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               99, 50
               

               Conread position:
               1-266
               

               Cow position:
               chr1:44769435-44769165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               43, 76
               

               Conread position:
               1-266
               

               Cow position:
               chr1:48444504-48444246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               48, 153
               

               Conread position:
               1-266
               

               Cow position:
               chr1:53374108-53374379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 178
               

               Conread position:
               1-266
               

               Cow position:
               chr1:53424866-53425123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               48, 164
               

               Conread position:
               1-266
               

               Cow position:
               chr1:54199706-54199434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 100
               

               Conread position:
               1-266
               

               Cow position:
               chr1:55135517-55135780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               1-266
               

               Cow position:
               chr1:55357606-55357337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               79, 41
               

               Conread position:
               1-266
               

               Cow position:
               chr1:57087574-57087295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               48, 90
               

               Conread position:
               1-266
               

               Cow position:
               chr1:61724346-61724074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               26, 165
               

               Conread position:
               1-266
               

               Cow position:
               chr1:68619245-68618985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               90, 45
               

               Conread position:
               1-266
               

               Cow position:
               chr1:68951317-68951575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 51
               

               Conread position:
               1-266
               

               Cow position:
               chr1:69941291-69941019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               48, 186
               

               Conread position:
               1-266
               

               Cow position:
               chr1:71045425-71045702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               45, 105
               

               Conread position:
               1-266
               

               Cow position:
               chr1:71325573-71325299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               44, 175
               

               Conread position:
               1-266
               

               Cow position:
               chr1:76020006-76019748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               42, 102
               

               Conread position:
               1-266
               

               Cow position:
               chr1:77620220-77620492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               44, 168
               

               Conread position:
               1-266
               

               Cow position:
               chr1:84255428-84255711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               1-266
               

               Cow position:
               chr1:85361529-85361808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               42, 260
               

               Conread position:
               1-266
               

               Cow position:
               chr1:89742338-89742048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr1:91817097-91816824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               1-266
               

               Cow position:
               chr1:94211908-94212182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 101
               

               Conread position:
               1-266
               

               Cow position:
               chr1:96365348-96365611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 7
               

               Conread position:
               1-266
               

               Cow position:
               chr1:96963993-96964268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 211
               

               Conread position:
               1-266
               

               Cow position:
               chr1:100421519-100421780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               48, 152
               

               Conread position:
               1-266
               

               Cow position:
               chr1:102519351-102519613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               1-267
               

               Cow position:
               chr1:94226874-94226603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 187
               

               Conread position:
               1-268
               

               Cow position:
               chr1:75093168-75093449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-269
               

               Cow position:
               chr1:1403789-1403530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               48, 94
               

               Conread position:
               1-269
               

               Cow position:
               chr1:1829633-1829368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 45
               

               Conread position:
               1-269
               

               Cow position:
               chr1:3035316-3035042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-269
               

               Cow position:
               chr1:3790381-3790115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               21, 174
               

               Conread position:
               1-269
               

               Cow position:
               chr1:4589807-4589523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 187
               

               Conread position:
               1-269
               

               Cow position:
               chr1:11873681-11873411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 100
               

               Conread position:
               1-269
               

               Cow position:
               chr1:12596230-12595953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 138
               

               Conread position:
               1-269
               

               Cow position:
               chr1:13895811-13895531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               1-269
               

               Cow position:
               chr1:18961813-18961532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               1-269
               

               Cow position:
               chr1:20204699-20204979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-269
               

               Cow position:
               chr1:22728723-22729002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               1-269
               

               Cow position:
               chr1:23488836-23488556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-269
               

               Cow position:
               chr1:26930294-26930020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               48, 82
               

               Conread position:
               1-269
               

               Cow position:
               chr1:35491902-35491626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               34, 161
               

               Conread position:
               1-269
               

               Cow position:
               chr1:41696735-41697009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 50
               

               Conread position:
               1-269
               

               Cow position:
               chr1:47543346-47543623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 68
               

               Conread position:
               1-269
               

               Cow position:
               chr1:57576088-57575808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 93
               

               Conread position:
               1-269
               

               Cow position:
               chr1:57901063-57900789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 50
               

               Conread position:
               1-269
               

               Cow position:
               chr1:58067032-58066751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               45, 245
               

               Conread position:
               1-269
               

               Cow position:
               chr1:61005888-61005605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-269
               

               Cow position:
               chr1:61392119-61391838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 103
               

               Conread position:
               1-269
               

               Cow position:
               chr1:61564468-61564747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-269
               

               Cow position:
               chr1:61876473-61876753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 244
               

               Conread position:
               1-269
               

               Cow position:
               chr1:64818216-64817934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-269
               

               Cow position:
               chr1:67009054-67008791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               1-269
               

               Cow position:
               chr1:71280359-71280077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-269
               

               Cow position:
               chr1:82884711-82884439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 100
               

               Conread position:
               1-269
               

               Cow position:
               chr1:89349656-89349913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               24, 155
               

               Conread position:
               1-269
               

               Cow position:
               chr1:90235269-90235002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               109, 57
               

               Conread position:
               1-269
               

               Cow position:
               chr1:90392824-90392540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-269
               

               Cow position:
               chr1:95499821-95499543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 101
               

               Conread position:
               1-269
               

               Cow position:
               chr1:99136756-99136480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-273
               

               Cow position:
               chr1:85028635-85028905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               45, 101
               

               Conread position:
               1-275
               

               Cow position:
               chr1:44125975-44125691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 177
               

               Conread position:
               1-284
               

               Cow position:
               chr1:34159509-34159803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 98
               

               Conread position:
               1-284
               

               Cow position:
               chr1:61494551-61494845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               48, 280
               

               Conread position:
               1-285
               

               Cow position:
               chr1:90640706-90641000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 94
               

               Conread position:
               1-286
               

               Cow position:
               chr1:28012395-28012109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 167
               

               Conread position:
               1-288
               

               Cow position:
               chr1:37414135-37413842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               45, 172
               

               Conread position:
               2-167
               

               Cow position:
               chr1:22823615-22823785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 158
               

               Conread position:
               2-206
               

               Cow position:
               chr1:88028966-88029173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               47, 97
               

               Conread position:
               2-247
               

               Cow position:
               chr1:40062123-40062381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               2-256
               

               Cow position:
               chr1:40473998-40474258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 141
               

               Conread position:
               2-258
               

               Cow position:
               chr1:3456547-3456810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 161
               

               Conread position:
               2-260
               

               Cow position:
               chr1:8532539-8532272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 123
               

               Conread position:
               2-260
               

               Cow position:
               chr1:76223016-76222749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               43, 237
               

               Conread position:
               2-260
               

               Cow position:
               chr1:98562835-98563104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 99
               

               Conread position:
               2-265
               

               Cow position:
               chr1:20125286-20125560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               2-265
               

               Cow position:
               chr1:44164755-44165029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 99
               

               Conread position:
               2-265
               

               Cow position:
               chr1:78783221-78783497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 272
               

               Conread position:
               2-266
               

               Cow position:
               chr1:21420722-21420447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               2-266
               

               Cow position:
               chr1:31348757-31348492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 93
               

               Conread position:
               2-266
               

               Cow position:
               chr1:31714775-31714497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-266
               

               Cow position:
               chr1:36613600-36613327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               2-266
               

               Cow position:
               chr1:41004692-41004415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 117
               

               Conread position:
               2-266
               

               Cow position:
               chr1:68097220-68096942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-266
               

               Cow position:
               chr1:76478605-76478883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-266
               

               Cow position:
               chr1:77748678-77748952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 142
               

               Conread position:
               2-266
               

               Cow position:
               chr1:81356028-81355761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 99
               

               Conread position:
               2-266
               

               Cow position:
               chr1:84556728-84556450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               2-266
               

               Cow position:
               chr1:91066473-91066205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               44, 125
               

               Conread position:
               2-266
               

               Cow position:
               chr1:92963065-92963343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               41, 232
               

               Conread position:
               2-266
               

               Cow position:
               chr1:101007932-101007672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               2-266
               

               Cow position:
               chr1:102647594-102647324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 172
               

               Conread position:
               2-269
               

               Cow position:
               chr1:3720751-3720483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 100
               

               Conread position:
               2-269
               

               Cow position:
               chr1:51968145-51968411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               32, 162
               

               Conread position:
               2-269
               

               Cow position:
               chr1:60114705-60114986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               2-269
               

               Cow position:
               chr1:73960375-73960656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               2-269
               

               Cow position:
               chr1:89342314-89342044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 93
               

               Conread position:
               2-269
               

               Cow position:
               chr1:98551395-98551667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               2-308
               

               Cow position:
               chr1:22745302-22745618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               41, 179
               

               Conread position:
               3-210
               

               Cow position:
               chr1:91051983-91051770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               3-242
               

               Cow position:
               chr1:42874271-42874023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               3-254
               

               Cow position:
               chr1:43893604-43893861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               40, 98
               

               Conread position:
               3-254
               

               Cow position:
               chr1:56718989-56719247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               43, 133
               

               Conread position:
               3-255
               

               Cow position:
               chr1:33716896-33717165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-256
               

               Cow position:
               chr1:72304694-72304433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               3-260
               

               Cow position:
               chr1:19465735-19465998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               46, 181
               

               Conread position:
               3-260
               

               Cow position:
               chr1:54207139-54206877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 97
               

               Conread position:
               3-260
               

               Cow position:
               chr1:68276083-68276355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               3-266
               

               Cow position:
               chr1:63391096-63390823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 98
               

               Conread position:
               3-266
               

               Cow position:
               chr1:82861449-82861729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-269
               

               Cow position:
               chr1:32630651-32630924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               43, 95
               

               Conread position:
               3-269
               

               Cow position:
               chr1:48105760-48105483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               3-269
               

               Cow position:
               chr1:53313085-53313362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               3-269
               

               Cow position:
               chr1:53458382-53458647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               32, 173
               

               Conread position:
               4-256
               

               Cow position:
               chr1:85596623-85596879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               42, 92
               

               Conread position:
               4-284
               

               Cow position:
               chr1:35162081-35162377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               5-266
               

               Cow position:
               chr1:72012128-72011861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 25
               

               Conread position:
               7-248
               

               Cow position:
               chr1:22628960-22628708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               8, 150
               

               Conread position:
               7-259
               

               Cow position:
               chr1:83943671-83943405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               7, 130
               

               Conread position:
               7-266
               

               Cow position:
               chr1:12464973-12464718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               7-266
               

               Cow position:
               chr1:63435123-63434858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               7-269
               

               Cow position:
               chr1:39555060-39555327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               7-269
               

               Cow position:
               chr1:82502539-82502813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 110
               

               Conread position:
               8-266
               

               Cow position:
               chr1:4032331-4032576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 37
               

               Conread position:
               9-260
               

               Cow position:
               chr1:69445056-69445306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               40, 91
               

               Conread position:
               10-257
               

               Cow position:
               chr1:11772398-11772135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               10-266
               

               Cow position:
               chr1:97820374-97820635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 247
               

               Conread position:
               13-238
               

               Cow position:
               chr1:5990606-5990833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               26, 175
               

               Conread position:
               13-273
               

               Cow position:
               chr1:70930496-70930762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 247
               

               Conread position:
               13-275
               

               Cow position:
               chr1:88652317-88652585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 89
               

               Conread position:
               14-266
               

               Cow position:
               chr1:87888093-87888348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               15-260
               

               Cow position:
               chr1:49839210-49839447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               18-258
               

               Cow position:
               chr1:101915860-101916112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               27, 83
               

               Conread position:
               18-269
               

               Cow position:
               chr1:33331379-33331137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 101
               

               Conread position:
               19-265
               

               Cow position:
               chr1:33997209-33996971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               22-266
               

               Cow position:
               chr1:47008727-47008979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               27, 167
               

               Conread position:
               25-259
               

               Cow position:
               chr1:53622666-53622901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               24, 91
               

               Conread position:
               32-271
               

               Cow position:
               chr1:72286336-72286104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 62
               

               Conread position:
               33-258
               

               Cow position:
               chr1:34685909-34686130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               35-248
               

               Cow position:
               chr1:49795716-49795934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 150
               

               Conread position:
               35-256
               

               Cow position:
               chr1:41056400-41056620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 94
               

               Conread position:
               35-256
               

               Cow position:
               chr1:74822166-74822393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               35-257
               

               Cow position:
               chr1:81673780-81674005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               65, 146
               

               Conread position:
               35-260
               

               Cow position:
               chr1:33811650-33811871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 115
               

               Conread position:
               35-265
               

               Cow position:
               chr1:91142439-91142207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               35-265
               

               Cow position:
               chr1:99837370-99837137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               73, 93
               

               Conread position:
               35-265
               

               Cow position:
               chr1:100800073-100800303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               124, 59
               

               Conread position:
               35-266
               

               Cow position:
               chr1:666076-666313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               35-266
               

               Cow position:
               chr1:26688762-26688527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               35-266
               

               Cow position:
               chr1:34000621-34000860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               35-266
               

               Cow position:
               chr1:69539413-69539645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               35-269
               

               Cow position:
               chr1:57525100-57524866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               73, 120
               

               Conread position:
               35-269
               

               Cow position:
               chr1:81613101-81613340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               37-260
               

               Cow position:
               chr1:33719832-33720061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 57
               

               Conread position:
               37-266
               

               Cow position:
               chr1:20001035-20000804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 113
               

               Conread position:
               38-256
               

               Cow position:
               chr1:8341-8560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               63, 141
               

               Conread position:
               38-256
               

               Cow position:
               chr1:72035210-72034987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               63, 90
               

               Conread position:
               41-254
               

               Cow position:
               chr1:81228609-81228402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               171
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               126, 52
               

               Conread position:
               42-228
               

               Cow position:
               chr1:81579482-81579677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               42-256
               

               Cow position:
               chr1:22448861-22448649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               42-260
               

               Cow position:
               chr1:60032875-60032656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               167, 0
               

               Conread position:
               42-260
               

               Cow position:
               chr1:71257760-71257536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               42-265
               

               Cow position:
               chr1:73561926-73561700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               42-265
               

               Cow position:
               chr1:89344632-89344858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               42-266
               

               Cow position:
               chr1:81472602-81472821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               56, 122
               

               Conread position:
               42-266
               

               Cow position:
               chr1:98380854-98380624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               59, 149
               

               Conread position:
               42-269
               

               Cow position:
               chr1:83048476-83048253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 135
               

               Conread position:
               42-280
               

               Cow position:
               chr1:42256787-42256543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               59, 234
               

               Conread position:
               42-284
               

               Cow position:
               chr1:98360691-98360432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               43-255
               

               Cow position:
               chr1:32631193-32631404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               43-260
               

               Cow position:
               chr1:18937109-18936887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               46-262
               

               Cow position:
               chr1:55686492-55686273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               46-265
               

               Cow position:
               chr1:50679560-50679336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               46-266
               

               Cow position:
               chr1:97755253-97755464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               46-266
               

               Cow position:
               chr1:100705861-100706081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               46-275
               

               Cow position:
               chr1:89510205-89509968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               47-265
               

               Cow position:
               chr1:31934241-31934459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               49-260
               

               Cow position:
               chr1:5409884-5409672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               49-269
               

               Cow position:
               chr1:25383389-25383614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               55-266
               

               Cow position:
               chr1:90864564-90864345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               55-269
               

               Cow position:
               chr1:43505259-43505475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               46, 120
               

               Conread position:
               56-256
               

               Cow position:
               chr1:52488221-52488023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               154, 37
               

               Conread position:
               56-269
               

               Cow position:
               chr1:60546533-60546311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               57-256
               

               Cow position:
               chr1:51394157-51394359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 128
               

               Conread position:
               57-260
               

               Cow position:
               chr1:52506806-52506613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               57-266
               

               Cow position:
               chr1:21954480-21954284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 158
               

               Conread position:
               57-269
               

               Cow position:
               chr1:14379793-14379584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               58-256
               

               Cow position:
               chr1:39510303-39510111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               58-258
               

               Cow position:
               chr1:21835685-21835885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 122
               

               Conread position:
               58-258
               

               Cow position:
               chr1:78810775-78810979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               58-260
               

               Cow position:
               chr1:95327414-95327209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 188
               

               Conread position:
               58-265
               

               Cow position:
               chr1:54478061-54478271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               58-265
               

               Cow position:
               chr1:84116141-84116345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               154, 88
               

               Conread position:
               58-266
               

               Cow position:
               chr1:45535441-45535653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               58-266
               

               Cow position:
               chr1:55146538-55146750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 144
               

               Conread position:
               58-266
               

               Cow position:
               chr1:80899847-80900065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               58-266
               

               Cow position:
               chr1:82338046-82337833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 71
               

               Conread position:
               58-269
               

               Cow position:
               chr1:67821471-67821260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               45, 135
               

               Conread position:
               58-275
               

               Cow position:
               chr1:71295569-71295351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               100, 33
               

               Conread position:
               59-242
               

               Cow position:
               chr1:61884655-61884843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               59-256
               

               Cow position:
               chr1:56748330-56748532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               59-257
               

               Cow position:
               chr1:81180240-81180035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               59-260
               

               Cow position:
               chr1:6941206-6941405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               59-260
               

               Cow position:
               chr1:6958619-6958818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               59-266
               

               Cow position:
               chr1:23099637-23099847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               24, 156
               

               Conread position:
               59-266
               

               Cow position:
               chr1:31348168-31347968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               59-266
               

               Cow position:
               chr1:57264246-57264048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               59-266
               

               Cow position:
               chr1:57635207-57635409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               59-266
               

               Cow position:
               chr1:64251309-64251106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               59-267
               

               Cow position:
               chr1:51628762-51628550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               42, 181
               

               Conread position:
               59-269
               

               Cow position:
               chr1:68818056-68817848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               59-284
               

               Cow position:
               chr1:74084449-74084227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               159, 34
               

               Conread position:
               60-266
               

               Cow position:
               chr1:39069210-39069007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               41, 109
               

               Conread position:
               61-256
               

               Cow position:
               chr1:16767343-16767145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 156
               

               Conread position:
               61-260
               

               Cow position:
               chr1:33701862-33702061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               39, 107
               

               Conread position:
               61-260
               

               Cow position:
               chr1:99609108-99609310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               61-266
               

               Cow position:
               chr1:20799610-20799833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 186
               

               Conread position:
               61-266
               

               Cow position:
               chr1:42555012-42555211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               61-266
               

               Cow position:
               chr1:79165350-79165137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               61-266
               

               Cow position:
               chr1:99095105-99095310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               40, 96
               

               Conread position:
               61-267
               

               Cow position:
               chr1:4290900-4291109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               61-269
               

               Cow position:
               chr1:3061852-3061636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               62-265
               

               Cow position:
               chr1:100551713-100551916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               39, 119
               

               Conread position:
               63-254
               

               Cow position:
               chr1:3757696-3757892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               63-266
               

               Cow position:
               chr1:45555106-45555312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 31
               

               Conread position:
               63-266
               

               Cow position:
               chr1:68827161-68826957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               63-266
               

               Cow position:
               chr1:97806536-97806736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               40, 61
               

               Conread position:
               65-266
               

               Cow position:
               chr1:61246405-61246211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               65-269
               

               Cow position:
               chr1:10632799-10632999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               35, 116
               

               Conread position:
               67-247
               

               Cow position:
               chr1:1916488-1916306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               67-256
               

               Cow position:
               chr1:3776866-3776674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 114
               

               Conread position:
               67-256
               

               Cow position:
               chr1:5135943-5135758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               67-256
               

               Cow position:
               chr1:102469217-102469027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               67-260
               

               Cow position:
               chr1:19545347-19545157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               157
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               67-260
               

               Cow position:
               chr1:81363742-81363926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               146, 30
               

               Conread position:
               67-266
               

               Cow position:
               chr1:64160089-64160288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               67-269
               

               Cow position:
               chr1:75744608-75744811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               67-269
               

               Cow position:
               chr1:96713066-96712860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               67-283
               

               Cow position:
               chr1:11770545-11770325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               68-260
               

               Cow position:
               chr1:99118134-99118331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 185
               

               Conread position:
               68-266
               

               Cow position:
               chr1:24534494-24534306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               68-266
               

               Cow position:
               chr1:53423427-53423631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               68-266
               

               Cow position:
               chr1:75967185-75967379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               68-266
               

               Cow position:
               chr1:89395340-89395549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               68-269
               

               Cow position:
               chr1:47233726-47233528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               37, 98
               

               Conread position:
               68-274
               

               Cow position:
               chr1:71253806-71253599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 201
               

               Conread position:
               68-284
               

               Cow position:
               chr1:3924045-3923829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               69-240
               

               Cow position:
               chr1:42138615-42138789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               31, 132
               

               Conread position:
               69-265
               

               Cow position:
               chr1:24655710-24655910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               69-267
               

               Cow position:
               chr1:36931909-36932106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               39, 103
               

               Conread position:
               69-269
               

               Cow position:
               chr1:81563483-81563687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               71-257
               

               Cow position:
               chr1:93528442-93528637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               71-266
               

               Cow position:
               chr1:102350006-102349806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               71-269
               

               Cow position:
               chr1:70538355-70538558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               72-265
               

               Cow position:
               chr1:56477348-56477532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               72-266
               

               Cow position:
               chr1:3137686-3137877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               73-258
               

               Cow position:
               chr1:51531527-51531707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               28, 74
               

               Conread position:
               73-266
               

               Cow position:
               chr1:58419686-58419885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               73-266
               

               Cow position:
               chr1:63905720-63905524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               28, 70
               

               Conread position:
               73-269
               

               Cow position:
               chr1:83583186-83582985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               20, 150
               

               Conread position:
               74-252
               

               Cow position:
               chr1:6077649-6077832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               74-269
               

               Cow position:
               chr1:44506722-44506919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               158
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               6, 43
               

               Conread position:
               74-269
               

               Cow position:
               chr1:84239352-84239162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               26, 100
               

               Conread position:
               76-258
               

               Cow position:
               chr1:87072461-87072637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 140
               

               Conread position:
               76-260
               

               Cow position:
               chr1:20002479-20002298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               25, 104
               

               Conread position:
               77-253
               

               Cow position:
               chr1:96635598-96635433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               77-260
               

               Cow position:
               chr1:95056813-95056997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               78-269
               

               Cow position:
               chr1:94403975-94404163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               79-256
               

               Cow position:
               chr1:70434752-70434941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               79-258
               

               Cow position:
               chr1:51445639-51445820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               79-269
               

               Cow position:
               chr1:71079193-71079007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               94, 26
               

               Conread position:
               79-282
               

               Cow position:
               chr1:30504231-30504436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               80-266
               

               Cow position:
               chr1:40531348-40531165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               21, 36
               

               Conread position:
               81-265
               

               Cow position:
               chr1:59192883-59192692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               81-266
               

               Cow position:
               chr1:51769847-51770036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 77
               

               Conread position:
               82-265
               

               Cow position:
               chr1:10655240-10655431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               83-239
               

               Cow position:
               chr1:102784724-102784884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 102
               

               Conread position:
               86-256
               

               Cow position:
               chr1:100512363-100512537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               86-266
               

               Cow position:
               chr1:51818708-51818888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               87-266
               

               Cow position:
               chr1:79278674-79278499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               87-267
               

               Cow position:
               chr1:43389280-43389102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               14, 104
               

               Conread position:
               89-256
               

               Cow position:
               chr1:41954482-41954307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               103, 21
               

               Conread position:
               89-266
               

               Cow position:
               chr1:43340852-43340664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               90-269
               

               Cow position:
               chr1:24542808-24542631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               94-257
               

               Cow position:
               chr1:43358240-43358073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               94-260
               

               Cow position:
               chr1:4293837-4293997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 86
               

               Conread position:
               94-260
               

               Cow position:
               chr1:15333656-15333826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               94-266
               

               Cow position:
               chr1:26200995-26201167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 119
               

               Conread position:
               94-269
               

               Cow position:
               chr1:55705479-55705299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               95-260
               

               Cow position:
               chr1:43872557-43872389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               97-266
               

               Cow position:
               chr1:98372407-98372581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 163
               

               Conread position:
               99-264
               

               Cow position:
               chr1:16962233-16962063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               99-266
               

               Cow position:
               chr1:98310841-98311016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               100-241
               

               Cow position:
               chr1:93043807-93043952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               100-242
               

               Cow position:
               chr1:71952869-71953006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               100-260
               

               Cow position:
               chr1:7186569-7186737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               100-265
               

               Cow position:
               chr1:64804326-64804155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               100-266
               

               Cow position:
               chr1:14981337-14981173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               100-266
               

               Cow position:
               chr1:45673493-45673657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               109, 34
               

               Conread position:
               100-269
               

               Cow position:
               chr1:98030696-98030865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               68, 121
               

               Conread position:
               100-273
               

               Cow position:
               chr1:53671968-53671788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 124
               

               Conread position:
               100-286
               

               Cow position:
               chr1:31235150-31234960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 180
               

               Conread position:
               102-260
               

               Cow position:
               chr1:34771720-34771562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               78, 55
               

               Conread position:
               103-266
               

               Cow position:
               chr1:68995956-68996130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               108-243
               

               Cow position:
               chr1:99792601-99792740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               109-260
               

               Cow position:
               chr1:62291895-62291749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               109-266
               

               Cow position:
               chr1:75382782-75382942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 114
               

               Conread position:
               109-269
               

               Cow position:
               chr1:57946096-57945931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 10
               

               Conread position:
               110-256
               

               Cow position:
               chr1:100393373-100393223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               110-284
               

               Cow position:
               chr1:6765816-6765990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               99, 164
               

               Conread position:
               113-259
               

               Cow position:
               chr1:49753726-49753869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               115-257
               

               Cow position:
               chr1:72103643-72103788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               115-266
               

               Cow position:
               chr1:32013753-32013904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 52
               

               Conread position:
               115-266
               

               Cow position:
               chr1:95654919-95654766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 132
               

               Conread position:
               116-275
               

               Cow position:
               chr1:4414410-4414252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               117-266
               

               Cow position:
               chr1:89438137-89437989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               138, 99
               

               Conread position:
               119-260
               

               Cow position:
               chr1:7449933-7450072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 48
               

               Conread position:
               119-265
               

               Cow position:
               chr1:81470929-81471079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               120-266
               

               Cow position:
               chr1:51654212-51654359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               123-266
               

               Cow position:
               chr1:90976278-90976137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 36
               

               Conread position:
               123-269
               

               Cow position:
               chr1:50266998-50266849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               123-285
               

               Cow position:
               chr1:92607115-92606949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 155
               

               Conread position:
               125-256
               

               Cow position:
               chr1:83594001-83593865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               126-265
               

               Cow position:
               chr1:82443649-82443509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               126-266
               

               Cow position:
               chr1:43703221-43703355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               126-266
               

               Cow position:
               chr1:46030545-46030408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 39
               

               Conread position:
               126-269
               

               Cow position:
               chr1:96277247-96277103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               126-269
               

               Cow position:
               chr1:102113301-102113154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               130-266
               

               Cow position:
               chr1:42398385-42398246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               131-266
               

               Cow position:
               chr1:63530393-63530522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 28
               

               Conread position:
               131-273
               

               Cow position:
               chr1:89082920-89083063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 139
               

               Conread position:
               132-250
               

               Cow position:
               chr1:71227890-71228018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               132-260
               

               Cow position:
               chr1:33207061-33206929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               132-260
               

               Cow position:
               chr1:56413706-56413573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               132-266
               

               Cow position:
               chr1:92369542-92369680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               132-269
               

               Cow position:
               chr1:11988342-11988204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               134-258
               

               Cow position:
               chr1:86578764-86578890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               134-266
               

               Cow position:
               chr1:3243754-3243886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               77, 42
               

               Conread position:
               134-266
               

               Cow position:
               chr1:75933088-75933220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               134-308
               

               Cow position:
               chr1:68763866-68763691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               137, 83
               

               Conread position:
               136-266
               

               Cow position:
               chr1:24445811-24445680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               139-265
               

               Cow position:
               chr1:20667921-20667795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               142-266
               

               Cow position:
               chr1:96472265-96472393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               143-256
               

               Cow position:
               chr1:56913657-56913544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               145-266
               

               Cow position:
               chr1:49317670-49317548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               148-265
               

               Cow position:
               chr1:101280886-101280769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-266
               

               Cow position:
               chr1:87095400-87095282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               66, 6
               

               Conread position:
               149-249
               

               Cow position:
               chr1:11832932-11832833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               149-259
               

               Cow position:
               chr1:20544127-20544235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               149-266
               

               Cow position:
               chr1:31608063-31607947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 31
               

               Conread position:
               149-266
               

               Cow position:
               chr1:80631534-80631648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 5
               

               Conread position:
               149-269
               

               Cow position:
               chr1:91875075-91874958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               149-280
               

               Cow position:
               chr1:77883519-77883648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 5
               

               Conread position:
               152-266
               

               Cow position:
               chr1:77683191-77683305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               154-254
               

               Cow position:
               chr1:7748053-7748156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               154-254
               

               Cow position:
               chr1:7752219-7752322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               154-255
               

               Cow position:
               chr1:14102904-14102802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               154-256
               

               Cow position:
               chr1:427083-426979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               154-266
               

               Cow position:
               chr1:38753753-38753868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               154-266
               

               Cow position:
               chr1:70028418-70028530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               154-266
               

               Cow position:
               chr1:100745442-100745556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               154-269
               

               Cow position:
               chr1:31960060-31960176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               154-269
               

               Cow position:
               chr1:86110896-86110780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               154-269
               

               Cow position:
               chr1:89508392-89508507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               156-253
               

               Cow position:
               chr1:85647944-85647847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               156-258
               

               Cow position:
               chr1:3882627-3882525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               157-266
               

               Cow position:
               chr1:70026505-70026396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-254
               

               Cow position:
               chr1:80311310-80311406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-266
               

               Cow position:
               chr1:51684643-51684749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               162-266
               

               Cow position:
               chr1:22192607-22192712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               163-248
               

               Cow position:
               chr1:85826191-85826273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               165-266
               

               Cow position:
               chr1:41115868-41115767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               167-266
               

               Cow position:
               chr1:65909375-65909475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-177
Cow position:	chr1:54179346-54179535 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	142
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	41, 0
Conread position:	1-178
Cow position:	chr1:76938323-76938137 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	139
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	48, 0
Conread position:	1-191
Cow position:	chr1:37887112-37886910 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	154
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	42, 76
Conread position:	1-199
Cow position:	chr1:50032321-50032529 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	146
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	48, 0
Conread position:	1-206
Cow position:	chr1:44836558-44836345 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	153
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	48, 188
Conread position:	1-210
Cow position:	chr1:25183797-25184023 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	165
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	45, 0
Conread position:	1-219
Cow position:	chr1:67577739-67577970 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	169
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	48, 188
Conread position:	1-221
Cow position:	chr1:82880339-82880568 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	170
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	42, 100
Conread position:	1-224
Cow position:	chr1:53650581-53650800 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	174
Alignm E-value:	2e-37
Alignm gaps (pig, cow):	156, 50
Conread position:	1-225
Cow position:	chr1:70828580-70828809 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	178
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	48, 123
Conread position:	1-231
Cow position:	chr1:51983270-51983497 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	179
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	48, 91
Conread position:	1-239
Cow position:	chr1:16856000-16855770 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	169
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	45, 0
Conread position:	1-241
Cow position:	chr1:11226571-11226317 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	197
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	41, 100
Conread position:	1-242
Cow position:	chr1:73756770-73757012 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	189
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	44, 7
Conread position:	1-243
Cow position:	chr1:53397658-53397916 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	194
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	45, 0
Conread position:	1-244
Cow position:	chr1:15547143-15547396 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	193
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	48, 101
Conread position:	1-248
Cow position:	chr1:31548512-31548769 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	189
Alignm E-value:	8.99999e-40
Alignm gaps (pig, cow):	42, 100
Conread position:	1-250
Cow position:	chr1:80336576-80336305 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	202
Alignm E-value:	8e-39
Alignm gaps (pig, cow):	45, 0
Conread position:	1-252
Cow position:	chr1:54258246-54258498 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	196
Alignm E-value:	0
Alignm gaps (pig, cow):	48, 168
Conread position:	1-254
Cow position:	chr1:732251-731998 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	192
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	48, 179