Cow genome map

Conread name: OvF4-UMC-p4mm3-008-a09

Conread position: 1-183
Cow position: chr11:53147891-53147705 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 100

Conread position: 1-188
Cow position: chr11:3797058-3797254 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 1-210
Cow position: chr11:29802905-29802695 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 48, 95

Conread position: 1-223
Cow position: chr11:35981773-35981545 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 157

Conread position: 1-223
Cow position: chr11:75401934-75401698 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 1-235
Cow position: chr11:36309761-36309517 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 1-238
Cow position: chr11:64029607-64029361 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 42, 100

Conread position: 1-242
Cow position: chr11:1625570-1625318 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 48, 179

Conread position: 1-242
Cow position: chr11:3703969-3704216 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 97

Conread position: 1-242
Cow position: chr11:16795499-16795252 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 123

Conread position: 1-242
Cow position: chr11:62750101-62749848 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 101

Conread position: 1-246
Cow position: chr11:42358773-42359022 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 48, 185

Conread position: 1-248
Cow position: chr11:54134596-54134344 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 47, 166

Conread position: 1-249
Cow position: chr11:55117122-55117389 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-252
Cow position: chr11:1486220-1485956 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 1-252
Cow position: chr11:18389212-18388952 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 119

Conread position: 1-252
Cow position: chr11:77237770-77238028 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 111

Conread position: 1-255
Cow position: chr11:11534249-11533989 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 34

Conread position: 1-256
Cow position: chr11:23251955-23251678 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 48, 0

Conread position: 1-256
Cow position: chr11:26483370-26483628 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 168

Conread position: 1-257
Cow position: chr11:10076423-10076682 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 48, 153

Conread position: 1-257
Cow position: chr11:35874324-35874077 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 55

Conread position: 1-257
Cow position: chr11:45282585-45282844 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 168

Conread position: 1-258
Cow position: chr11:3393561-3393294 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 82

Conread position: 1-258
Cow position: chr11:10213907-10213648 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 95

Conread position: 1-258
Cow position: chr11:20601888-20602145 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 40, 171

Conread position: 1-258
Cow position: chr11:29004087-29004348 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 100

Conread position: 1-258
Cow position: chr11:35881555-35881826 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 1-259
Cow position: chr11:64932649-64932383 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 39, 203

Conread position: 1-260
Cow position: chr11:3769638-3769374 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 198

Conread position: 1-260
Cow position: chr11:6154063-6154328 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 39, 74

Conread position: 1-260
Cow position: chr11:13061570-13061312 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 152

Conread position: 1-260
Cow position: chr11:23138423-23138141 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 112

Conread position: 1-260
Cow position: chr11:33012539-33012813 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 1-260
Cow position: chr11:40250952-40250683 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 98

Conread position: 1-260
Cow position: chr11:55347914-55348184 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 1-260
Cow position: chr11:58587992-58588264 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 266

Conread position: 1-260
Cow position: chr11:68327404-68327139 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 174

Conread position: 1-262
Cow position: chr11:18371781-18371518 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 207, 48

Conread position: 1-265
Cow position: chr11:865945-866223 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 43, 258

Conread position: 1-265
Cow position: chr11:4323015-4323280 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 42, 181

Conread position: 1-265
Cow position: chr11:4412371-4412092 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 1-265
Cow position: chr11:17831584-17831298 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 45, 251

Conread position: 1-265
Cow position: chr11:27386691-27386419 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 181

Conread position: 1-265
Cow position: chr11:33413882-33414160 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 203

Conread position: 1-265
Cow position: chr11:33601039-33600762 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 123

Conread position: 1-265
Cow position: chr11:39115147-39115416 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 1-265
Cow position: chr11:41239623-41239348 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 100

Conread position: 1-265
Cow position: chr11:41577356-41577091 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 48, 112

Conread position: 1-265
Cow position: chr11:48901421-48901158 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 44

Conread position: 1-265
Cow position: chr11:53130464-53130734 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 98

Conread position: 1-265
Cow position: chr11:76114301-76114577 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 1-265
Cow position: chr11:82232072-82232338 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 99

Conread position: 1-266
Cow position: chr11:2309521-2309795 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 98

Conread position: 1-266
Cow position: chr11:5032128-5031850 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 100

Conread position: 1-266
Cow position: chr11:5418612-5418339 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 162

Conread position: 1-266
Cow position: chr11:21894501-21894228 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 48, 34

Conread position: 1-266
Cow position: chr11:26067531-26067259 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 181

Conread position: 1-266
Cow position: chr11:30191812-30192098 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-266
Cow position: chr11:31885161-31885442 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 199

Conread position: 1-266
Cow position: chr11:35363145-35363422 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 12

Conread position: 1-266
Cow position: chr11:38638774-38639043 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 48, 96

Conread position: 1-266
Cow position: chr11:49105702-49105981 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 105

Conread position: 1-266
Cow position: chr11:53313913-53313648 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 225

Conread position: 1-266
Cow position: chr11:53778265-53778539 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 188

Conread position: 1-266
Cow position: chr11:62979126-62979412 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-266
Cow position: chr11:64638874-64638605 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 165

Conread position: 1-266
Cow position: chr11:67746926-67747208 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-266
Cow position: chr11:68571023-68570742 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 150

Conread position: 1-266
Cow position: chr11:68905401-68905151 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 58

Conread position: 1-266
Cow position: chr11:71846700-71846422 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-266
Cow position: chr11:75480386-75480104 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 200

Conread position: 1-266
Cow position: chr11:76369870-76369597 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 189

Conread position: 1-266
Cow position: chr11:77705413-77705679 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 48, 160

Conread position: 1-266
Cow position: chr11:77759108-77758834 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 48, 92

Conread position: 1-266
Cow position: chr11:84891095-84890826 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 51

Conread position: 1-267
Cow position: chr11:986595-986858 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 28

Conread position: 1-267
Cow position: chr11:44818757-44819027 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 101, 50

Conread position: 1-268
Cow position: chr11:21856609-21856890 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-269
Cow position: chr11:8525454-8525184 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 95

Conread position: 1-269
Cow position: chr11:16251605-16251320 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 45, 197

Conread position: 1-269
Cow position: chr11:17981057-17981341 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 82

Conread position: 1-269
Cow position: chr11:25386719-25386991 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 48, 131

Conread position: 1-269
Cow position: chr11:27248141-27248419 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-269
Cow position: chr11:31352922-31352642 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 99

Conread position: 1-269
Cow position: chr11:32749756-32750041 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 1-269
Cow position: chr11:33256072-33255791 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 48, 127

Conread position: 1-269
Cow position: chr11:35579903-35580184 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-269
Cow position: chr11:38843212-38843494 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 1-269
Cow position: chr11:40818996-40818711 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-269
Cow position: chr11:42793311-42793046 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 55

Conread position: 1-269
Cow position: chr11:44031648-44031928 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 266

Conread position: 1-269
Cow position: chr11:44637112-44636831 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 158

Conread position: 1-269
Cow position: chr11:45155026-45154753 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 225

Conread position: 1-269
Cow position: chr11:50153168-50152889 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 25

Conread position: 1-269
Cow position: chr11:53859934-53860224 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-269
Cow position: chr11:54216481-54216761 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 100

Conread position: 1-269
Cow position: chr11:58973190-58972909 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 1-269
Cow position: chr11:62710223-62709946 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 202

Conread position: 1-269
Cow position: chr11:67951308-67951038 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 45, 128

Conread position: 1-269
Cow position: chr11:78819756-78820024 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 162

Conread position: 1-269
Cow position: chr11:84385988-84385709 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 67, 48

Conread position: 1-270
Cow position: chr11:64334506-64334784 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 45, 269

Conread position: 1-273
Cow position: chr11:44036364-44036652 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 47, 236

Conread position: 1-276
Cow position: chr11:65430724-65430991 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-284
Cow position: chr11:61427263-61427548 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 100

Conread position: 1-285
Cow position: chr11:44642632-44642344 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-290
Cow position: chr11:18086689-18086386 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 2-248
Cow position: chr11:73512770-73512525 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 142

Conread position: 2-252
Cow position: chr11:28848327-28848068 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 99

Conread position: 2-256
Cow position: chr11:1380344-1380594 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 158

Conread position: 2-256
Cow position: chr11:44576089-44575822 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 44, 194

Conread position: 2-256
Cow position: chr11:64382247-64382515 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 2-256
Cow position: chr11:73798106-73797840 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 206

Conread position: 2-258
Cow position: chr11:7924935-7924665 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 41

Conread position: 2-258
Cow position: chr11:47586697-47586432 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 188

Conread position: 2-258
Cow position: chr11:64043899-64044157 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 40, 98

Conread position: 2-264
Cow position: chr11:50197795-50197513 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-265
Cow position: chr11:21371395-21371110 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 2-266
Cow position: chr11:19997047-19996769 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 2-266
Cow position: chr11:30639281-30639018 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 155, 44

Conread position: 2-266
Cow position: chr11:56797079-56796818 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 47

Conread position: 2-266
Cow position: chr11:57624427-57624149 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 2-267
Cow position: chr11:81614979-81614712 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 47, 59

Conread position: 2-269
Cow position: chr11:24907532-24907807 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 182
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 2-269
Cow position: chr11:29916197-29916458 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 47, 34

Conread position: 2-269
Cow position: chr11:52297570-52297294 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-243
Cow position: chr11:1849512-1849261 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 88

Conread position: 3-269
Cow position: chr11:59702135-59702411 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 99

Conread position: 4-220
Cow position: chr11:78480450-78480678 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 4-266
Cow position: chr11:47165482-47165216 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 159

Conread position: 4-266
Cow position: chr11:48271847-48272121 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 77

Conread position: 4-295
Cow position: chr11:17321313-17321614 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 42, 109

Conread position: 5-266
Cow position: chr11:54333985-54334257 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 200

Conread position: 5-266
Cow position: chr11:85764612-85764862 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 44

Conread position: 8-259
Cow position: chr11:36899630-36899366 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 94

Conread position: 8-266
Cow position: chr11:38235893-38236167 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 37, 191

Conread position: 9-266
Cow position: chr11:59902550-59902815 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 90

Conread position: 13-242
Cow position: chr11:8841082-8840838 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 13-265
Cow position: chr11:56518649-56518386 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 16-269
Cow position: chr11:62490097-62490359 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 176

Conread position: 17-266
Cow position: chr11:23232841-23232592 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 14, 53

Conread position: 17-270
Cow position: chr11:35684834-35684567 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 18-260
Cow position: chr11:42836294-42836043 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 243

Conread position: 22-265
Cow position: chr11:1485683-1485432 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 23-256
Cow position: chr11:43913893-43914127 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 138

Conread position: 23-257
Cow position: chr11:8148212-8147984 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 59, 23

Conread position: 31-266
Cow position: chr11:81137909-81138147 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 91, 10

Conread position: 32-263
Cow position: chr11:36182376-36182606 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 35-258
Cow position: chr11:62151191-62150970 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 133

Conread position: 35-258
Cow position: chr11:70838612-70838377 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 35-260
Cow position: chr11:61454844-61454609 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 35-266
Cow position: chr11:17860463-17860230 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 35-266
Cow position: chr11:30934110-30934348 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 91

Conread position: 35-266
Cow position: chr11:59872617-59872855 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 116, 157

Conread position: 35-266
Cow position: chr11:81174581-81174814 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 59

Conread position: 35-269
Cow position: chr11:955055-955292 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 119

Conread position: 35-269
Cow position: chr11:45677798-45678032 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 73, 151

Conread position: 35-285
Cow position: chr11:32076451-32076197 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 238

Conread position: 35-290
Cow position: chr11:31437308-31437046 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 146

Conread position: 38-256
Cow position: chr11:73354363-73354140 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 38-257
Cow position: chr11:4732032-4732257 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 63, 164

Conread position: 38-266
Cow position: chr11:86926227-86926003 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 52

Conread position: 39-266
Cow position: chr11:18698567-18698801 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 39-266
Cow position: chr11:78381350-78381130 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 46

Conread position: 41-258
Cow position: chr11:80820302-80820083 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 149

Conread position: 42-251
Cow position: chr11:4206996-4207221 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 42-252
Cow position: chr11:51756013-51756228 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 42-256
Cow position: chr11:70273001-70273219 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 139, 25

Conread position: 42-257
Cow position: chr11:15503799-15504021 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 29

Conread position: 42-265
Cow position: chr11:8495735-8495965 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 82, 88

Conread position: 42-265
Cow position: chr11:60302260-60302038 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 208

Conread position: 42-266
Cow position: chr11:3833650-3833429 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 59, 124

Conread position: 42-266
Cow position: chr11:6594550-6594325 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 138, 125

Conread position: 42-266
Cow position: chr11:30120965-30120742 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 37

Conread position: 42-266
Cow position: chr11:37974623-37974849 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 59, 52

Conread position: 42-266
Cow position: chr11:61137500-61137275 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 115

Conread position: 42-266
Cow position: chr11:80923638-80923400 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 42-266
Cow position: chr11:83196199-83196422 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 59, 25

Conread position: 42-269
Cow position: chr11:16226403-16226630 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 66, 144

Conread position: 42-269
Cow position: chr11:25319748-25319980 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 42-286
Cow position: chr11:58600561-58600808 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 70, 14

Conread position: 43-266
Cow position: chr11:26535473-26535700 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 52

Conread position: 43-285
Cow position: chr11:19890581-19890806 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 52

Conread position: 44-259
Cow position: chr11:53719644-53719860 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 51

Conread position: 44-265
Cow position: chr11:73478323-73478542 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 45-266
Cow position: chr11:9837400-9837176 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 125

Conread position: 45-266
Cow position: chr11:43361100-43360859 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 49

Conread position: 46-242
Cow position: chr11:2092049-2092239 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 46-244
Cow position: chr11:10294299-10294493 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 37

Conread position: 46-260
Cow position: chr11:63847553-63847766 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 57, 47

Conread position: 46-266
Cow position: chr11:65857559-65857783 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 47-266
Cow position: chr11:74929483-74929707 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 47

Conread position: 47-269
Cow position: chr11:2788083-2788309 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 54, 8

Conread position: 48-244
Cow position: chr11:6639215-6639412 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 166, 125

Conread position: 48-257
Cow position: chr11:66897096-66896882 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 53, 39

Conread position: 48-266
Cow position: chr11:62016567-62016352 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 47

Conread position: 49-255
Cow position: chr11:53552961-53553149 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 49-265
Cow position: chr11:7315422-7315204 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 52, 205

Conread position: 49-265
Cow position: chr11:80761675-80761456 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 49-266
Cow position: chr11:32609696-32609926 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 0

Conread position: 49-269
Cow position: chr11:21841006-21840788 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 120

Conread position: 50-266
Cow position: chr11:18572509-18572725 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 131

Conread position: 54-260
Cow position: chr11:65409448-65409237 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 54-260
Cow position: chr11:80530080-80530286 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 47, 107

Conread position: 54-266
Cow position: chr11:48232452-48232657 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 98

Conread position: 55-266
Cow position: chr11:49935033-49934813 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 56-248
Cow position: chr11:30720809-30721003 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 135

Conread position: 56-257
Cow position: chr11:13190931-13191140 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 0

Conread position: 56-265
Cow position: chr11:8988518-8988306 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 45, 162

Conread position: 56-269
Cow position: chr11:39162988-39163207 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 57-266
Cow position: chr11:33754186-33753979 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 17

Conread position: 58-226
Cow position: chr11:75177605-75177771 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 30

Conread position: 58-254
Cow position: chr11:68207122-68206927 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 58-255
Cow position: chr11:41549620-41549423 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 58-256
Cow position: chr11:18484446-18484252 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 50, 112

Conread position: 58-260
Cow position: chr11:29947213-29947013 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 43, 141

Conread position: 58-260
Cow position: chr11:83066209-83066412 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 44, 125

Conread position: 58-265
Cow position: chr11:10302475-10302267 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 85

Conread position: 58-265
Cow position: chr11:49148763-49148962 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 36

Conread position: 58-266
Cow position: chr11:11125376-11125586 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 58-266
Cow position: chr11:48932869-48932661 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 36

Conread position: 58-266
Cow position: chr11:57111594-57111383 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 36

Conread position: 58-266
Cow position: chr11:70459288-70459491 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 104

Conread position: 58-269
Cow position: chr11:25165159-25165369 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 58-269
Cow position: chr11:36229665-36229448 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 58-269
Cow position: chr11:58155800-58156017 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 58-269
Cow position: chr11:74316420-74316639 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 43, 36

Conread position: 59-242
Cow position: chr11:3282773-3282951 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 53

Conread position: 59-257
Cow position: chr11:35148883-35149078 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 155, 45

Conread position: 59-258
Cow position: chr11:62880910-62880708 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 64

Conread position: 59-258
Cow position: chr11:68910132-68909934 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 10

Conread position: 59-260
Cow position: chr11:1668389-1668594 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 168

Conread position: 59-266
Cow position: chr11:7589905-7590117 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 59-266
Cow position: chr11:14308353-14308560 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 35

Conread position: 59-266
Cow position: chr11:38193866-38194078 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 59-267
Cow position: chr11:55333622-55333836 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 0

Conread position: 59-269
Cow position: chr11:19508011-19508222 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 99

Conread position: 59-269
Cow position: chr11:23128821-23128616 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 28

Conread position: 59-269
Cow position: chr11:46580081-46580282 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 99

Conread position: 59-285
Cow position: chr11:21844418-21844190 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 50

Conread position: 60-258
Cow position: chr11:40258682-40258492 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 154, 33

Conread position: 61-265
Cow position: chr11:81300896-81300687 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 61-266
Cow position: chr11:18244225-18244014 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 61-266
Cow position: chr11:77241097-77241294 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 156, 40

Conread position: 62-252
Cow position: chr11:60470462-60470269 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 90

Conread position: 62-265
Cow position: chr11:67931777-67931568 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 73

Conread position: 62-266
Cow position: chr11:55761597-55761794 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 32

Conread position: 62-269
Cow position: chr11:41983729-41983526 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 121

Conread position: 63-260
Cow position: chr11:45632046-45631844 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 63-308
Cow position: chr11:65827013-65826774 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 81

Conread position: 64-226
Cow position: chr11:75510513-75510347 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 64-260
Cow position: chr11:10127894-10127705 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 120

Conread position: 65-256
Cow position: chr11:44222619-44222803 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 97

Conread position: 65-269
Cow position: chr11:33341425-33341220 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 66

Conread position: 67-256
Cow position: chr11:42003231-42003030 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 21

Conread position: 67-256
Cow position: chr11:49819696-49819504 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 26

Conread position: 67-257
Cow position: chr11:83043638-83043449 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 34, 101

Conread position: 67-260
Cow position: chr11:45646868-45646677 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 67-266
Cow position: chr11:1362758-1362552 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 27

Conread position: 67-266
Cow position: chr11:32377910-32378111 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 34, 0

Conread position: 67-266
Cow position: chr11:51688003-51687801 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 67-266
Cow position: chr11:75748158-75748357 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 34, 27

Conread position: 69-248
Cow position: chr11:75355334-75355516 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 69-252
Cow position: chr11:17278937-17278754 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 25

Conread position: 69-260
Cow position: chr11:27462660-27462474 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 32, 99

Conread position: 69-264
Cow position: chr11:10992004-10992203 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 69-265
Cow position: chr11:62155355-62155549 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 36

Conread position: 69-266
Cow position: chr11:377926-377720 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 69-266
Cow position: chr11:13043412-13043222 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 34, 18

Conread position: 69-266
Cow position: chr11:30475724-30475926 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 25

Conread position: 69-275
Cow position: chr11:59156146-59155948 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 70-258
Cow position: chr11:18210623-18210430 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 31, 0

Conread position: 70-264
Cow position: chr11:17227914-17227725 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 31, 85

Conread position: 70-266
Cow position: chr11:6400346-6400146 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 24

Conread position: 70-308
Cow position: chr11:71455513-71455763 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 71-266
Cow position: chr11:8105509-8105706 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 71-269
Cow position: chr11:11232728-11232528 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 26, 86

Conread position: 72-242
Cow position: chr11:83230657-83230491 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 72-266
Cow position: chr11:12555690-12555487 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 30

Conread position: 73-266
Cow position: chr11:9088566-9088379 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 61

Conread position: 73-269
Cow position: chr11:50778098-50778300 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 74-274
Cow position: chr11:24937392-24937593 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 27, 20

Conread position: 75-259
Cow position: chr11:45898325-45898136 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 45

Conread position: 76-260
Cow position: chr11:63482694-63482508 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 76-265
Cow position: chr11:34032464-34032279 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 138, 27

Conread position: 78-266
Cow position: chr11:62045132-62045320 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 89

Conread position: 79-266
Cow position: chr11:36799561-36799378 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 14

Conread position: 79-269
Cow position: chr11:59370749-59370939 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 129

Conread position: 79-272
Cow position: chr11:49980857-49980658 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 80-260
Cow position: chr11:27746653-27746842 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 80-266
Cow position: chr11:47544863-47545054 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 82-248
Cow position: chr11:70836630-70836465 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 73

Conread position: 82-266
Cow position: chr11:30764217-30764409 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 83-259
Cow position: chr11:83397643-83397822 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 66

Conread position: 84-259
Cow position: chr11:36647100-36647280 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 86-266
Cow position: chr11:33348443-33348260 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 86-266
Cow position: chr11:63516564-63516750 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 151
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 47

Conread position: 86-269
Cow position: chr11:2917835-2917659 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 87-258
Cow position: chr11:20238415-20238587 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 95

Conread position: 87-266
Cow position: chr11:45872576-45872393 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 89-269
Cow position: chr11:2907781-2907592 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 11, 0

Conread position: 93-266
Cow position: chr11:64904744-64904921 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 94-256
Cow position: chr11:48544193-48544351 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 150, 83

Conread position: 94-259
Cow position: chr11:34120948-34121117 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 94-269
Cow position: chr11:35154078-35153898 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 97-266
Cow position: chr11:27722115-27722285 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 85, 163

Conread position: 98-266
Cow position: chr11:18341284-18341117 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 120

Conread position: 99-243
Cow position: chr11:26277335-26277190 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 88

Conread position: 99-265
Cow position: chr11:41438469-41438297 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 99-265
Cow position: chr11:62808893-62808726 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 115, 0

Conread position: 99-266
Cow position: chr11:33310727-33310896 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 118, 55

Conread position: 100-249
Cow position: chr11:81042318-81042465 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 21

Conread position: 100-257
Cow position: chr11:81281701-81281862 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 100-259
Cow position: chr11:84924342-84924177 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 100-265
Cow position: chr11:31525621-31525792 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 62, 32

Conread position: 100-266
Cow position: chr11:2083904-2084065 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 63

Conread position: 100-266
Cow position: chr11:21819688-21819521 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 146, 0

Conread position: 100-269
Cow position: chr11:15016802-15016968 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 100-269
Cow position: chr11:47899033-47899206 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 145
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 0

Conread position: 100-269
Cow position: chr11:63520529-63520699 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 89

Conread position: 101-260
Cow position: chr11:57725071-57724905 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 103-265
Cow position: chr11:57769591-57769438 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 111, 80

Conread position: 104-266
Cow position: chr11:36659052-36658897 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 108-259
Cow position: chr11:23385480-23385327 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 109-252
Cow position: chr11:11469868-11469726 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 109-256
Cow position: chr11:7444805-7444955 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 109-266
Cow position: chr11:14094659-14094500 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 79

Conread position: 110-256
Cow position: chr11:49396285-49396134 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 110-265
Cow position: chr11:65762830-65762677 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 130
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 112-256
Cow position: chr11:21728499-21728355 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 115-269
Cow position: chr11:18591662-18591505 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 36

Conread position: 117-269
Cow position: chr11:29960078-29960222 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 66

Conread position: 120-266
Cow position: chr11:61246681-61246535 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 34

Conread position: 120-271
Cow position: chr11:70422793-70422644 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 56

Conread position: 123-258
Cow position: chr11:17660874-17661010 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 123-265
Cow position: chr11:21830573-21830430 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 60

Conread position: 123-265
Cow position: chr11:35723756-35723902 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 108

Conread position: 126-266
Cow position: chr11:5526792-5526647 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 127-230
Cow position: chr11:374952-375055 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 127-260
Cow position: chr11:34145133-34144997 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 90

Conread position: 127-286
Cow position: chr11:11557952-11558112 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 141, 0

Conread position: 129-266
Cow position: chr11:36301296-36301152 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 130-266
Cow position: chr11:38874616-38874479 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 131-258
Cow position: chr11:23586422-23586553 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 132-256
Cow position: chr11:69810692-69810820 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 132-266
Cow position: chr11:5485796-5485934 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 132-266
Cow position: chr11:7458495-7458360 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 87, 8

Conread position: 133-265
Cow position: chr11:36286488-36286619 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 47

Conread position: 133-269
Cow position: chr11:36238571-36238710 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 18

Conread position: 134-266
Cow position: chr11:61958959-61958821 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 136-265
Cow position: chr11:71493068-71492932 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 141-287
Cow position: chr11:56524749-56524602 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 24

Conread position: 143-265
Cow position: chr11:1157445-1157568 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 143-266
Cow position: chr11:47850826-47850951 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 107
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 149-246
Cow position: chr11:8936678-8936581 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 149-266
Cow position: chr11:13592544-13592660 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 5

Conread position: 149-266
Cow position: chr11:33364152-33364268 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 5

Conread position: 149-266
Cow position: chr11:48042233-48042112 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 149-266
Cow position: chr11:65607883-65607767 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 102
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 149-266
Cow position: chr11:72375878-72375762 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 154-260
Cow position: chr11:63434244-63434138 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 155-266
Cow position: chr11:36672235-36672118 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 159-266
Cow position: chr11:30954815-30954923 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 95
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 162-266
Cow position: chr11:38670502-38670607 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 162-266
Cow position: chr11:47109789-47109893 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 163-265
Cow position: chr11:26144278-26144173 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 167-269
Cow position: chr11:30830791-30830689 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 168-266
Cow position: chr11:71008961-71009062 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 171-266
Cow position: chr11:16907214-16907120 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.