Cow genome map

Conread name: OvF4-UMC-p4mm3-008-a09

Conread position: 1-160
Cow position: chr17:38829792-38829959 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 1-172
Cow position: chr17:3388570-3388747 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 99

Conread position: 1-196
Cow position: chr17:11912992-11912788 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 7

Conread position: 1-209
Cow position: chr17:3154061-3153843 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 48, 0

Conread position: 1-210
Cow position: chr17:27069192-27069408 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 1-225
Cow position: chr17:32399814-32399576 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-240
Cow position: chr17:21038987-21039235 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 26

Conread position: 1-240
Cow position: chr17:29074633-29074378 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 1-240
Cow position: chr17:29083914-29084146 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 113

Conread position: 1-246
Cow position: chr17:24823973-24824210 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 48, 86

Conread position: 1-248
Cow position: chr17:4299333-4299580 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 98

Conread position: 1-248
Cow position: chr17:14008185-14008451 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 204

Conread position: 1-253
Cow position: chr17:34079390-34079132 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 44, 181

Conread position: 1-254
Cow position: chr17:3387005-3387258 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 135

Conread position: 1-254
Cow position: chr17:17179748-17180001 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 94

Conread position: 1-256
Cow position: chr17:2034258-2034508 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 71

Conread position: 1-256
Cow position: chr17:14026207-14025940 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 132

Conread position: 1-256
Cow position: chr17:14033939-14033668 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 261

Conread position: 1-256
Cow position: chr17:15103172-15102912 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 1-256
Cow position: chr17:26182930-26183195 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 187

Conread position: 1-256
Cow position: chr17:26514423-26514692 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 1-256
Cow position: chr17:32989201-32989454 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 164

Conread position: 1-256
Cow position: chr17:32993905-32993646 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 164

Conread position: 1-256
Cow position: chr17:41394001-41393741 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 86

Conread position: 1-256
Cow position: chr17:41400261-41399999 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 89

Conread position: 1-257
Cow position: chr17:20093416-20093160 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 100

Conread position: 1-257
Cow position: chr17:21874608-21874333 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 155

Conread position: 1-258
Cow position: chr17:4601835-4601570 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 37, 86

Conread position: 1-258
Cow position: chr17:11216172-11215917 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 166

Conread position: 1-258
Cow position: chr17:40331477-40331741 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 45, 112

Conread position: 1-259
Cow position: chr17:18592146-18592415 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 261

Conread position: 1-259
Cow position: chr17:20022809-20022541 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-260
Cow position: chr17:1482060-1482328 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 252

Conread position: 1-260
Cow position: chr17:20848244-20848499 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 48, 20

Conread position: 1-260
Cow position: chr17:20889083-20889353 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 100

Conread position: 1-260
Cow position: chr17:23063422-23063691 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-260
Cow position: chr17:29276940-29277208 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 1-260
Cow position: chr17:41029660-41029931 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 1-262
Cow position: chr17:3131769-3132035 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 10

Conread position: 1-265
Cow position: chr17:2584409-2584681 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 115

Conread position: 1-265
Cow position: chr17:6566187-6566447 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 46, 75

Conread position: 1-265
Cow position: chr17:11102075-11101821 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 100, 39

Conread position: 1-265
Cow position: chr17:11382007-11381736 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 253

Conread position: 1-265
Cow position: chr17:13143974-13143709 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 50

Conread position: 1-265
Cow position: chr17:20033205-20032930 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 30

Conread position: 1-265
Cow position: chr17:20780226-20780492 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 94

Conread position: 1-265
Cow position: chr17:22775100-22775356 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 98

Conread position: 1-265
Cow position: chr17:26764725-26764999 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-266
Cow position: chr17:242347-242620 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 80

Conread position: 1-266
Cow position: chr17:1295863-1295587 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-266
Cow position: chr17:3498956-3498681 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 48, 192

Conread position: 1-266
Cow position: chr17:5224111-5224383 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 152

Conread position: 1-266
Cow position: chr17:11056671-11056388 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 1-266
Cow position: chr17:12929835-12929555 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 1-266
Cow position: chr17:13244312-13244058 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 36, 117

Conread position: 1-266
Cow position: chr17:13940611-13940336 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 1-266
Cow position: chr17:15188367-15188095 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 97

Conread position: 1-266
Cow position: chr17:15300156-15299892 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 181

Conread position: 1-266
Cow position: chr17:17222053-17222327 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 44, 29

Conread position: 1-266
Cow position: chr17:21335989-21335712 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 26

Conread position: 1-266
Cow position: chr17:21495085-21495359 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 104

Conread position: 1-266
Cow position: chr17:21959970-21959704 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 29

Conread position: 1-266
Cow position: chr17:21973423-21973151 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 100

Conread position: 1-266
Cow position: chr17:22563904-22564164 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 50

Conread position: 1-266
Cow position: chr17:24580573-24580314 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 103, 45

Conread position: 1-266
Cow position: chr17:25608798-25608519 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 1-266
Cow position: chr17:27305871-27306141 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 86

Conread position: 1-266
Cow position: chr17:27795356-27795628 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 48, 138

Conread position: 1-266
Cow position: chr17:28539751-28540012 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 38

Conread position: 1-266
Cow position: chr17:30539541-30539270 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 166

Conread position: 1-266
Cow position: chr17:30664987-30665254 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 81

Conread position: 1-266
Cow position: chr17:32457872-32457586 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 138

Conread position: 1-266
Cow position: chr17:43717600-43717332 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 96

Conread position: 1-267
Cow position: chr17:11386224-11386499 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 42, 100

Conread position: 1-267
Cow position: chr17:40421377-40421653 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 48, 101

Conread position: 1-269
Cow position: chr17:1061350-1061074 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 141

Conread position: 1-269
Cow position: chr17:1410538-1410254 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 115

Conread position: 1-269
Cow position: chr17:3306577-3306852 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 100

Conread position: 1-269
Cow position: chr17:6263616-6263898 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 1-269
Cow position: chr17:13922186-13922464 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-269
Cow position: chr17:14231844-14231568 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 232

Conread position: 1-269
Cow position: chr17:24553712-24553992 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 254

Conread position: 1-269
Cow position: chr17:24973658-24973937 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 1-269
Cow position: chr17:25542104-25541835 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 223

Conread position: 1-269
Cow position: chr17:36499870-36499592 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 1-270
Cow position: chr17:1707995-1707716 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 48, 156

Conread position: 1-270
Cow position: chr17:38832750-38833029 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-271
Cow position: chr17:33271965-33271695 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 48, 137

Conread position: 1-275
Cow position: chr17:27667486-27667199 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 45, 282

Conread position: 1-284
Cow position: chr17:20233935-20234231 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 164

Conread position: 1-285
Cow position: chr17:17060964-17060677 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 39

Conread position: 1-291
Cow position: chr17:5730632-5730917 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 48, 176

Conread position: 1-359
Cow position: chr17:20855388-20855755 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 219

Conread position: 2-177
Cow position: chr17:2274983-2275168 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 2-246
Cow position: chr17:16117719-16117460 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 2-248
Cow position: chr17:17121385-17121639 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 188

Conread position: 2-256
Cow position: chr17:20083803-20083541 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 175

Conread position: 2-259
Cow position: chr17:24549879-24550152 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 101

Conread position: 2-266
Cow position: chr17:3518530-3518270 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 101, 74

Conread position: 2-266
Cow position: chr17:6956399-6956679 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 2-266
Cow position: chr17:10473544-10473814 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 122

Conread position: 2-266
Cow position: chr17:16699717-16699445 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 97

Conread position: 2-266
Cow position: chr17:20993331-20993057 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 162

Conread position: 2-266
Cow position: chr17:21660006-21659733 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 171

Conread position: 2-266
Cow position: chr17:22248493-22248215 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 2-266
Cow position: chr17:38614669-38614941 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-266
Cow position: chr17:40289291-40289013 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 47, 97

Conread position: 2-269
Cow position: chr17:29715477-29715213 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 37, 234

Conread position: 2-269
Cow position: chr17:40642381-40642100 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 2-270
Cow position: chr17:33934037-33933762 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 43, 175

Conread position: 2-273
Cow position: chr17:12216362-12216085 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 267

Conread position: 2-285
Cow position: chr17:30718707-30718417 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 3-234
Cow position: chr17:8644747-8644990 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 136

Conread position: 3-256
Cow position: chr17:9853696-9853965 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 3-256
Cow position: chr17:18861008-18860750 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 82

Conread position: 3-256
Cow position: chr17:29157140-29157393 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 46, 96

Conread position: 3-257
Cow position: chr17:14003539-14003791 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 136

Conread position: 3-260
Cow position: chr17:3471125-3471397 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 46, 165

Conread position: 3-260
Cow position: chr17:43142010-43141740 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 46, 168

Conread position: 3-266
Cow position: chr17:25188993-25189270 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 46, 96

Conread position: 3-269
Cow position: chr17:20129388-20129652 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 40, 169

Conread position: 3-269
Cow position: chr17:25900909-25901182 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 98

Conread position: 3-269
Cow position: chr17:33291087-33290830 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 97, 42

Conread position: 3-269
Cow position: chr17:39790396-39790683 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 3-285
Cow position: chr17:9897627-9897910 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 62

Conread position: 4-265
Cow position: chr17:11618291-11618567 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 205

Conread position: 5-266
Cow position: chr17:5688635-5688375 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 155

Conread position: 5-266
Cow position: chr17:24077118-24077386 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 105

Conread position: 7-269
Cow position: chr17:31122885-31122608 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 8-214
Cow position: chr17:4752603-4752820 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 91

Conread position: 8-256
Cow position: chr17:18720729-18720477 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 41, 139

Conread position: 8-266
Cow position: chr17:3843207-3843462 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 125

Conread position: 9-266
Cow position: chr17:18494797-18494533 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 9-269
Cow position: chr17:23101491-23101223 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 217

Conread position: 9-292
Cow position: chr17:11839417-11839707 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 37, 84

Conread position: 10-266
Cow position: chr17:9117360-9117629 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 13-260
Cow position: chr17:7132726-7132474 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 42

Conread position: 13-266
Cow position: chr17:19455576-19455329 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 59

Conread position: 15-261
Cow position: chr17:18472909-18473158 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 48

Conread position: 15-266
Cow position: chr17:8544030-8544290 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 100

Conread position: 18-258
Cow position: chr17:35244890-35244646 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 128

Conread position: 33-255
Cow position: chr17:21031536-21031754 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 180, 60

Conread position: 35-248
Cow position: chr17:32366036-32366252 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 134, 51

Conread position: 35-258
Cow position: chr17:43527731-43527952 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 179, 58

Conread position: 35-259
Cow position: chr17:5000824-5000603 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 58

Conread position: 35-260
Cow position: chr17:9175933-9175712 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 146

Conread position: 35-260
Cow position: chr17:24883815-24883591 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 25, 80

Conread position: 35-260
Cow position: chr17:29951293-29951523 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 35-265
Cow position: chr17:2517089-2516856 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 35-265
Cow position: chr17:2520308-2520075 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 35-265
Cow position: chr17:3503328-3503562 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 137

Conread position: 35-266
Cow position: chr17:22032933-22032708 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 122, 59

Conread position: 35-266
Cow position: chr17:37161165-37161396 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 134

Conread position: 35-266
Cow position: chr17:40771578-40771819 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 35-269
Cow position: chr17:31243-31483 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 35-269
Cow position: chr17:9568037-9567803 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 133

Conread position: 35-269
Cow position: chr17:14051352-14051112 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 35-269
Cow position: chr17:18109336-18109100 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 38-257
Cow position: chr17:26230692-26230924 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 57

Conread position: 38-260
Cow position: chr17:32651369-32651596 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 63, 0

Conread position: 38-266
Cow position: chr17:34595697-34595923 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 121, 49

Conread position: 42-248
Cow position: chr17:26818695-26818485 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 52

Conread position: 42-259
Cow position: chr17:24876895-24877118 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 58, 0

Conread position: 42-260
Cow position: chr17:23337257-23337040 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 143

Conread position: 42-261
Cow position: chr17:17059197-17059409 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 42-265
Cow position: chr17:20839800-20839579 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 9

Conread position: 42-265
Cow position: chr17:37163772-37163539 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 27, 199

Conread position: 42-266
Cow position: chr17:5896155-5895928 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 28, 54

Conread position: 42-266
Cow position: chr17:20126378-20126595 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 118, 52

Conread position: 42-266
Cow position: chr17:21620471-21620701 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 42-266
Cow position: chr17:25796583-25796353 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 0

Conread position: 42-269
Cow position: chr17:18495750-18495535 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 25

Conread position: 42-273
Cow position: chr17:37579222-37578989 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 66, 148

Conread position: 43-266
Cow position: chr17:42347463-42347243 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 125

Conread position: 44-269
Cow position: chr17:11664829-11664603 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 49

Conread position: 45-266
Cow position: chr17:11296397-11296622 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 58, 27

Conread position: 46-265
Cow position: chr17:32027701-32027474 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 46-269
Cow position: chr17:21004070-21003843 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 136

Conread position: 47-257
Cow position: chr17:26627881-26627665 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 48

Conread position: 48-263
Cow position: chr17:23245974-23246191 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 70

Conread position: 49-252
Cow position: chr17:21115184-21114982 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 101

Conread position: 49-265
Cow position: chr17:4721251-4721472 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 52, 106

Conread position: 49-266
Cow position: chr17:31481278-31481053 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 52, 41

Conread position: 49-269
Cow position: chr17:25335620-25335408 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 67

Conread position: 56-266
Cow position: chr17:33999273-33999066 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 162

Conread position: 57-243
Cow position: chr17:36533433-36533616 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 109

Conread position: 57-266
Cow position: chr17:21017566-21017779 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 169

Conread position: 58-256
Cow position: chr17:34316935-34316734 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 101, 158

Conread position: 58-258
Cow position: chr17:5423298-5423096 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 36

Conread position: 58-258
Cow position: chr17:35126487-35126682 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 91

Conread position: 58-259
Cow position: chr17:15333937-15333737 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 43, 30

Conread position: 58-259
Cow position: chr17:27274335-27274538 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 58-260
Cow position: chr17:4824274-4824472 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 35

Conread position: 58-260
Cow position: chr17:35388237-35388036 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 32

Conread position: 58-266
Cow position: chr17:8079090-8079299 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 64

Conread position: 58-266
Cow position: chr17:9746294-9746497 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 0

Conread position: 58-266
Cow position: chr17:15684278-15684495 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 127

Conread position: 58-266
Cow position: chr17:27819075-27819285 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 21

Conread position: 58-269
Cow position: chr17:6423534-6423746 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 36

Conread position: 59-256
Cow position: chr17:1359023-1358828 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 59-265
Cow position: chr17:12220164-12219955 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 59-265
Cow position: chr17:14088553-14088341 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 42, 35

Conread position: 59-265
Cow position: chr17:17405910-17406120 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 10, 132

Conread position: 59-266
Cow position: chr17:1020793-1020579 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 108

Conread position: 59-266
Cow position: chr17:8690666-8690459 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 74

Conread position: 59-266
Cow position: chr17:9778025-9778230 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 42, 91

Conread position: 59-266
Cow position: chr17:31232156-31231948 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 119

Conread position: 59-266
Cow position: chr17:32554249-32554042 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 100, 34

Conread position: 59-266
Cow position: chr17:34948414-34948621 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 105

Conread position: 59-266
Cow position: chr17:38200992-38200778 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 59-269
Cow position: chr17:24587392-24587607 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 59-275
Cow position: chr17:11172844-11172627 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 99

Conread position: 60-266
Cow position: chr17:25141241-25141429 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 19

Conread position: 61-265
Cow position: chr17:30999552-30999751 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 50

Conread position: 62-266
Cow position: chr17:41290240-41290040 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 32

Conread position: 63-230
Cow position: chr17:7810961-7810788 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 64-242
Cow position: chr17:12759861-12759677 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 64-265
Cow position: chr17:31263523-31263316 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 65-269
Cow position: chr17:20870313-20870115 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 96, 28

Conread position: 65-271
Cow position: chr17:3182804-3182597 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 66-269
Cow position: chr17:1275301-1275510 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 8

Conread position: 67-258
Cow position: chr17:5767696-5767889 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 67-266
Cow position: chr17:29040684-29040483 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 157

Conread position: 67-269
Cow position: chr17:25128567-25128363 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 35, 62

Conread position: 67-282
Cow position: chr17:20835375-20835594 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 209

Conread position: 68-258
Cow position: chr17:11156710-11156515 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 68-266
Cow position: chr17:33926338-33926144 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 91, 25

Conread position: 68-267
Cow position: chr17:33052646-33052843 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 98

Conread position: 68-269
Cow position: chr17:8837158-8836964 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 22, 0

Conread position: 69-258
Cow position: chr17:25097247-25097437 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 25

Conread position: 69-266
Cow position: chr17:7436950-7437153 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 65

Conread position: 72-270
Cow position: chr17:4225704-4225509 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 96

Conread position: 73-256
Cow position: chr17:21710293-21710478 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 28, 132

Conread position: 75-260
Cow position: chr17:27765071-27765246 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 85

Conread position: 76-266
Cow position: chr17:32279116-32278923 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 25, 113

Conread position: 76-269
Cow position: chr17:38646859-38647043 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 0

Conread position: 78-256
Cow position: chr17:1035811-1035625 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 79-258
Cow position: chr17:6624052-6624233 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 151
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 80-265
Cow position: chr17:21628277-21628461 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 94

Conread position: 86-260
Cow position: chr17:5006690-5006511 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 86-260
Cow position: chr17:12059289-12059118 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 15, 8

Conread position: 90-269
Cow position: chr17:4436426-4436247 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 107

Conread position: 94-256
Cow position: chr17:37480184-37480019 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 7, 87

Conread position: 94-260
Cow position: chr17:32950081-32950250 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 94

Conread position: 94-266
Cow position: chr17:25999925-26000099 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 94-269
Cow position: chr17:24773492-24773665 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 123

Conread position: 95-265
Cow position: chr17:12536658-12536487 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 5, 0

Conread position: 95-269
Cow position: chr17:10510849-10510673 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 22

Conread position: 99-266
Cow position: chr17:20932143-20932312 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 99-284
Cow position: chr17:26515921-26515734 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 76

Conread position: 100-248
Cow position: chr17:37482263-37482108 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 100-265
Cow position: chr17:24490337-24490509 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 100-269
Cow position: chr17:908562-908728 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 140
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 102, 0

Conread position: 100-273
Cow position: chr17:12447582-12447415 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 101-266
Cow position: chr17:10459119-10458955 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 102-258
Cow position: chr17:3577356-3577516 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 104-269
Cow position: chr17:34208000-34207833 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 54, 75

Conread position: 107-258
Cow position: chr17:3442845-3442694 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 107-266
Cow position: chr17:24149000-24149166 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 108-269
Cow position: chr17:4967933-4968098 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 140

Conread position: 109-258
Cow position: chr17:12270090-12269941 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 45

Conread position: 109-266
Cow position: chr17:36268221-36268374 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 77

Conread position: 109-269
Cow position: chr17:12590988-12591152 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 115-258
Cow position: chr17:24821697-24821838 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 134, 0

Conread position: 116-257
Cow position: chr17:21918042-21917900 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 51

Conread position: 119-266
Cow position: chr17:979318-979173 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 48

Conread position: 123-261
Cow position: chr17:21298063-21298209 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 123-265
Cow position: chr17:7142703-7142847 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 125-265
Cow position: chr17:40792064-40792204 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 126-242
Cow position: chr17:28467978-28468094 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 126-256
Cow position: chr17:27549986-27549849 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 126-258
Cow position: chr17:14762277-14762145 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 84, 97

Conread position: 126-266
Cow position: chr17:38613088-38613229 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 110, 85

Conread position: 126-269
Cow position: chr17:31037538-31037395 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 127-266
Cow position: chr17:1562931-1562789 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 61

Conread position: 129-266
Cow position: chr17:267739-267602 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 34

Conread position: 132-265
Cow position: chr17:31701285-31701424 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 133-267
Cow position: chr17:5382137-5382009 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 81, 56

Conread position: 148-266
Cow position: chr17:11921418-11921299 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 149-256
Cow position: chr17:40673252-40673360 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 5

Conread position: 149-266
Cow position: chr17:31581350-31581466 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 82

Conread position: 149-266
Cow position: chr17:32280535-32280649 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 151-257
Cow position: chr17:14060909-14060801 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 154-265
Cow position: chr17:6328982-6329095 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 159-266
Cow position: chr17:32348949-32349055 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 160-266
Cow position: chr17:6848681-6848788 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 169-260
Cow position: chr17:23563904-23563814 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 169-266
Cow position: chr17:24559178-24559276 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.