Cow genome map

Conread name: OvF4-UMC-p4mm3-008-a09

Conread position: 1-151
Cow position: chr23:39762037-39762194 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 73

Conread position: 1-163
Cow position: chr23:10843995-10844164 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1-204
Cow position: chr23:27529619-27529412 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 48, 183

Conread position: 1-206
Cow position: chr23:9712782-9712998 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 190

Conread position: 1-210
Cow position: chr23:26322756-26322545 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 165

Conread position: 1-217
Cow position: chr23:666438-666216 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 97

Conread position: 1-219
Cow position: chr23:1696498-1696721 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 45, 95

Conread position: 1-223
Cow position: chr23:208512-208734 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 98

Conread position: 1-240
Cow position: chr23:1664360-1664608 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 45, 202

Conread position: 1-241
Cow position: chr23:1430131-1429876 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 42, 0

Conread position: 1-242
Cow position: chr23:25669397-25669164 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 24

Conread position: 1-243
Cow position: chr23:31493553-31493790 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 42, 48

Conread position: 1-248
Cow position: chr23:14245179-14245438 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 1-252
Cow position: chr23:4529223-4528953 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 43, 0

Conread position: 1-254
Cow position: chr23:14739122-14739379 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 97

Conread position: 1-254
Cow position: chr23:28052946-28053207 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 186

Conread position: 1-256
Cow position: chr23:1337645-1337367 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 48, 129

Conread position: 1-256
Cow position: chr23:21789102-21788831 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 1-256
Cow position: chr23:23470620-23470875 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 54

Conread position: 1-256
Cow position: chr23:26986611-26986338 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 48, 0

Conread position: 1-256
Cow position: chr23:32309350-32309605 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 162

Conread position: 1-258
Cow position: chr23:5151650-5151916 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 16

Conread position: 1-259
Cow position: chr23:14191221-14191489 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 76

Conread position: 1-259
Cow position: chr23:15702836-15702566 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 123

Conread position: 1-259
Cow position: chr23:28306723-28306998 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-259
Cow position: chr23:40780997-40781262 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 92

Conread position: 1-260
Cow position: chr23:344506-344237 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-260
Cow position: chr23:10554342-10554071 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 1-260
Cow position: chr23:26741781-26741519 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 42, 168

Conread position: 1-260
Cow position: chr23:33601851-33601590 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 44, 90

Conread position: 1-263
Cow position: chr23:29824395-29824123 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 117

Conread position: 1-265
Cow position: chr23:7392614-7392349 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 149

Conread position: 1-265
Cow position: chr23:18802604-18802329 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 229

Conread position: 1-265
Cow position: chr23:22530737-22530472 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 100, 47

Conread position: 1-265
Cow position: chr23:24866975-24867248 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-265
Cow position: chr23:26319087-26319360 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 245

Conread position: 1-265
Cow position: chr23:28916209-28916485 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 156

Conread position: 1-265
Cow position: chr23:37992665-37992932 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 89

Conread position: 1-266
Cow position: chr23:361242-360972 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 83

Conread position: 1-266
Cow position: chr23:1398365-1398092 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 48, 64

Conread position: 1-266
Cow position: chr23:2179978-2179699 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 156

Conread position: 1-266
Cow position: chr23:3727730-3727452 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 99

Conread position: 1-266
Cow position: chr23:4579368-4579096 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 190

Conread position: 1-266
Cow position: chr23:5162096-5162371 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 180

Conread position: 1-266
Cow position: chr23:7175292-7175562 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 235

Conread position: 1-266
Cow position: chr23:7596659-7596388 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 45, 126

Conread position: 1-266
Cow position: chr23:9734088-9734358 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 101

Conread position: 1-266
Cow position: chr23:10014217-10014482 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 133

Conread position: 1-266
Cow position: chr23:10852724-10852995 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 1-266
Cow position: chr23:13511405-13511678 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 143

Conread position: 1-266
Cow position: chr23:14839063-14838797 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 48, 169

Conread position: 1-266
Cow position: chr23:15056958-15056699 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 51

Conread position: 1-266
Cow position: chr23:15710408-15710129 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 48, 101

Conread position: 1-266
Cow position: chr23:17796648-17796365 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 138

Conread position: 1-266
Cow position: chr23:18367365-18367643 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 86

Conread position: 1-266
Cow position: chr23:22804393-22804669 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 1-266
Cow position: chr23:29441331-29441051 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 1-266
Cow position: chr23:40777932-40778210 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 101

Conread position: 1-267
Cow position: chr23:1640480-1640759 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 255

Conread position: 1-267
Cow position: chr23:7844958-7845237 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-269
Cow position: chr23:221739-222015 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 162

Conread position: 1-269
Cow position: chr23:1289972-1290240 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 97

Conread position: 1-269
Cow position: chr23:1700591-1700854 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 48, 97

Conread position: 1-269
Cow position: chr23:3710582-3710860 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 192

Conread position: 1-269
Cow position: chr23:24509372-24509648 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 1-269
Cow position: chr23:34416238-34416510 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 147

Conread position: 1-269
Cow position: chr23:35070153-35070422 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 45, 100

Conread position: 1-269
Cow position: chr23:38455516-38455235 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 146

Conread position: 1-269
Cow position: chr23:41285605-41285863 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 38

Conread position: 1-284
Cow position: chr23:21336820-21336523 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 173

Conread position: 1-353
Cow position: chr23:35926268-35926609 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 182

Conread position: 2-198
Cow position: chr23:772321-772526 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 99

Conread position: 2-255
Cow position: chr23:28118430-28118167 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 37, 99

Conread position: 2-261
Cow position: chr23:8698116-8698380 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 48

Conread position: 2-265
Cow position: chr23:13520128-13520393 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 77

Conread position: 2-266
Cow position: chr23:30889317-30889578 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 157, 59

Conread position: 2-269
Cow position: chr23:9268260-9268539 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 100

Conread position: 2-269
Cow position: chr23:40774210-40774491 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 2-270
Cow position: chr23:533903-534175 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 97

Conread position: 3-238
Cow position: chr23:39778087-39778321 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 145

Conread position: 3-265
Cow position: chr23:3208945-3208678 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 97

Conread position: 3-266
Cow position: chr23:7402377-7402645 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 169

Conread position: 3-269
Cow position: chr23:16383803-16383524 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 4-251
Cow position: chr23:18698354-18698095 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 45, 186

Conread position: 4-266
Cow position: chr23:39784641-39784917 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 5-380
Cow position: chr23:37065514-37065887 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 16

Conread position: 8-266
Cow position: chr23:1009724-1009457 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 13

Conread position: 10-257
Cow position: chr23:353900-353645 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 63

Conread position: 14-265
Cow position: chr23:39309432-39309172 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 24-266
Cow position: chr23:19538293-19538052 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 31

Conread position: 35-257
Cow position: chr23:19758919-19758689 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 153

Conread position: 35-265
Cow position: chr23:27403057-27403287 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 132, 58

Conread position: 35-265
Cow position: chr23:29459383-29459148 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 31, 154

Conread position: 35-266
Cow position: chr23:14164693-14164457 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 129

Conread position: 35-269
Cow position: chr23:4437530-4437769 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 42

Conread position: 35-274
Cow position: chr23:29626125-29626364 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 66, 126

Conread position: 39-265
Cow position: chr23:31601743-31601509 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 41-258
Cow position: chr23:16563559-16563776 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 117

Conread position: 42-266
Cow position: chr23:13599066-13599288 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 58, 34

Conread position: 42-266
Cow position: chr23:29329809-29330046 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 42-266
Cow position: chr23:29471397-29471181 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 36

Conread position: 42-269
Cow position: chr23:16495352-16495120 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 52

Conread position: 43-252
Cow position: chr23:479246-479461 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 117

Conread position: 43-266
Cow position: chr23:4726517-4726731 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 79

Conread position: 45-266
Cow position: chr23:1670638-1670845 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 46-256
Cow position: chr23:32555453-32555240 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 46-256
Cow position: chr23:33233183-33232976 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 54, 41

Conread position: 46-269
Cow position: chr23:1883115-1883339 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 213

Conread position: 46-269
Cow position: chr23:3918376-3918151 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 46-278
Cow position: chr23:1690510-1690749 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 56, 0

Conread position: 48-258
Cow position: chr23:1428541-1428747 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 55, 44

Conread position: 49-256
Cow position: chr23:3262774-3262562 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 52, 98

Conread position: 51-266
Cow position: chr23:36309154-36309364 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 56-265
Cow position: chr23:186903-187120 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 57-288
Cow position: chr23:18796958-18796722 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 200

Conread position: 58-256
Cow position: chr23:32961634-32961432 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 58-260
Cow position: chr23:4562615-4562823 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 69

Conread position: 58-265
Cow position: chr23:11045220-11045428 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 13

Conread position: 58-265
Cow position: chr23:29346025-29345818 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 193

Conread position: 58-266
Cow position: chr23:3247322-3247528 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 97

Conread position: 58-266
Cow position: chr23:21445859-21446063 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 20

Conread position: 58-266
Cow position: chr23:25358465-25358676 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 114

Conread position: 58-266
Cow position: chr23:33711505-33711705 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 8, 30

Conread position: 58-284
Cow position: chr23:29242678-29242912 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 59-256
Cow position: chr23:4338871-4338670 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 12

Conread position: 59-258
Cow position: chr23:16881422-16881227 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 75

Conread position: 59-266
Cow position: chr23:1647364-1647562 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 28

Conread position: 59-266
Cow position: chr23:6592958-6592756 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 42, 35

Conread position: 59-266
Cow position: chr23:9652732-9652537 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 99

Conread position: 59-269
Cow position: chr23:17404587-17404785 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 59-269
Cow position: chr23:39806607-39806813 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 36

Conread position: 59-282
Cow position: chr23:1536063-1536286 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 45, 35

Conread position: 60-266
Cow position: chr23:16583173-16582965 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 108

Conread position: 61-254
Cow position: chr23:8293238-8293436 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 143

Conread position: 61-256
Cow position: chr23:11380521-11380319 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 61-260
Cow position: chr23:3394752-3394558 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 33

Conread position: 61-265
Cow position: chr23:20195181-20194974 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 124

Conread position: 62-269
Cow position: chr23:21452995-21452785 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 64-266
Cow position: chr23:38208453-38208669 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 10

Conread position: 67-266
Cow position: chr23:20057124-20056923 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 117

Conread position: 67-269
Cow position: chr23:1721244-1721037 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 120

Conread position: 68-265
Cow position: chr23:4740735-4740526 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 69-256
Cow position: chr23:808907-809101 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 82

Conread position: 69-266
Cow position: chr23:26632545-26632746 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 69-266
Cow position: chr23:38854989-38854793 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 50

Conread position: 70-266
Cow position: chr23:4810496-4810697 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 70-269
Cow position: chr23:2282428-2282228 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 54

Conread position: 71-269
Cow position: chr23:29034060-29034263 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 72-266
Cow position: chr23:33940408-33940212 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 143

Conread position: 74-256
Cow position: chr23:9599252-9599429 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 86

Conread position: 74-266
Cow position: chr23:2417206-2417395 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 8

Conread position: 76-266
Cow position: chr23:18402534-18402345 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 18

Conread position: 76-286
Cow position: chr23:41348896-41348681 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 18

Conread position: 77-266
Cow position: chr23:13359573-13359756 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 17

Conread position: 79-259
Cow position: chr23:6767647-6767827 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 7

Conread position: 79-266
Cow position: chr23:16700284-16700095 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 22, 70

Conread position: 82-266
Cow position: chr23:1885418-1885228 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 84-266
Cow position: chr23:27544592-27544772 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 17, 96

Conread position: 90-252
Cow position: chr23:4523213-4523046 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 94-255
Cow position: chr23:35254468-35254306 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 88

Conread position: 94-265
Cow position: chr23:11080851-11081018 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 7, 61

Conread position: 97-259
Cow position: chr23:24704053-24704218 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 100-252
Cow position: chr23:7484856-7485007 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 51

Conread position: 100-262
Cow position: chr23:12050142-12050309 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 100-266
Cow position: chr23:15742876-15743035 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 100-266
Cow position: chr23:32105649-32105814 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 109, 85

Conread position: 100-267
Cow position: chr23:5723320-5723489 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 101-266
Cow position: chr23:25378433-25378598 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 29

Conread position: 103-260
Cow position: chr23:20996251-20996402 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 5, 57

Conread position: 104-265
Cow position: chr23:12290063-12290226 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 130

Conread position: 104-269
Cow position: chr23:1489837-1489997 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 107-258
Cow position: chr23:1068529-1068377 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 127
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 0

Conread position: 107-266
Cow position: chr23:2502065-2501911 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 110-256
Cow position: chr23:40648941-40648792 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 106

Conread position: 111-266
Cow position: chr23:18296595-18296752 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 97, 0

Conread position: 111-266
Cow position: chr23:21764705-21764861 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 111-266
Cow position: chr23:29801220-29801376 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 112-266
Cow position: chr23:22399190-22399347 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 145

Conread position: 115-254
Cow position: chr23:1776839-1776698 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 115-265
Cow position: chr23:1742149-1742299 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 93, 38

Conread position: 115-265
Cow position: chr23:30585870-30585719 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 94

Conread position: 123-256
Cow position: chr23:20437763-20437625 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 123-260
Cow position: chr23:16631064-16631207 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 110

Conread position: 123-266
Cow position: chr23:20443498-20443350 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 123-306
Cow position: chr23:20259377-20259193 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 150

Conread position: 125-266
Cow position: chr23:1942523-1942672 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 126-260
Cow position: chr23:29786550-29786410 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 126-266
Cow position: chr23:5451124-5451268 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 126-266
Cow position: chr23:30999378-30999522 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 127-258
Cow position: chr23:1585585-1585450 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 132-266
Cow position: chr23:19371262-19371127 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 139-284
Cow position: chr23:3282299-3282155 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 138, 111

Conread position: 142-265
Cow position: chr23:5515786-5515912 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 146-264
Cow position: chr23:27029754-27029871 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 102
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 146-266
Cow position: chr23:12334034-12334150 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 149-255
Cow position: chr23:4104231-4104337 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 42

Conread position: 153-266
Cow position: chr23:11250232-11250346 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 154-265
Cow position: chr23:20248865-20248753 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 155-266
Cow position: chr23:18416216-18416103 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 156-247
Cow position: chr23:16744380-16744472 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 160-260
Cow position: chr23:22350498-22350598 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 160-266
Cow position: chr23:19774611-19774717 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 165-265
Cow position: chr23:1921385-1921283 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 170-266
Cow position: chr23:33153342-33153246 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.