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Cow genome map

           
Conread name:
           
OvF4-UMC-p4mm3-008-a09
        

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:33687233-33687020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
42, 209
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr25:14103962-14104182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 116
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr25:10011054-10010803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr25:37469443-37469686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 102
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr25:14274106-14274366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr25:23945849-23945587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:2414502-2414749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:25754330-25754067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:27504509-27504248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:30319784-30319514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:36746781-36746513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:41363474-41363218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr25:20069389-20069657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr25:24572737-24573002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
48, 181
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr25:16922127-16921854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr25:20394872-20395130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr25:21191155-21191425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
48, 237
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr25:26282695-26282965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
48, 95
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr25:33839053-33839318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 167
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:1837908-1838177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:5514674-5514950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 99
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:6470551-6470278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:7800801-7801078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 248
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:9957369-9957100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
45, 173
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:12204134-12204409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 189
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:14791421-14791693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:17354044-17354318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 170
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:21024537-21024274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:21245941-21245664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:23389607-23389340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:31733067-31732794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
29, 203
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:36779161-36779436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 128
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:41107426-41107696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
38, 186
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:5539087-5539365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:7386426-7386692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:7641783-7641512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
24, 247
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:14954360-14954079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:16560925-16560649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:26087181-26087463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:41356132-41355850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr25:26238534-26238814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr25:12359871-12360156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr25:11437137-11436865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 201
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:8120442-8120728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr25:23351061-23351346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:1735645-1735357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:21209281-21208988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 266
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:5792137-5791839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr25:8231216-8230973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr25:17658281-17658529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 99
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr25:22530953-22531210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 158
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr25:13062523-13062791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr25:13067316-13067048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr25:15412692-15412960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr25:11054596-11054838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr25:2046885-2046621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr25:13333089-13333364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr25:13569501-13569231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr25:25827127-25827408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 100
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr25:6948388-6948111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr25:11662149-11661874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr25:20076164-20076435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
3-258
               

               
Cow position:
               
chr25:20020302-20020061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr25:7445820-7446092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
43, 122
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr25:9842674-9842900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
7-260
               

               
Cow position:
               
chr25:15694654-15694915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 162
               

               
Conread position:
               
7-269
               

               
Cow position:
               
chr25:24727115-24726839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
8-265
               

               
Cow position:
               
chr25:18564167-18564428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 168
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr25:26654580-26654849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
37, 186
               

               
Conread position:
               
9-271
               

               
Cow position:
               
chr25:18448514-18448782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
10-257
               

               
Cow position:
               
chr25:6886294-6886042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
91, 36
               

               
Conread position:
               
13-269
               

               
Cow position:
               
chr25:9847463-9847731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
13-269
               

               
Cow position:
               
chr25:26682242-26682512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
14-256
               

               
Cow position:
               
chr25:448660-448415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
18-266
               

               
Cow position:
               
chr25:9743907-9744170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
20-269
               

               
Cow position:
               
chr25:25051700-25051438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 177
               

               
Conread position:
               
28-259
               

               
Cow position:
               
chr25:2498962-2499196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 187
               

               
Conread position:
               
35-255
               

               
Cow position:
               
chr25:12097550-12097770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
51, 21
               

               
Conread position:
               
35-265
               

               
Cow position:
               
chr25:17975660-17975430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
66, 226
               

               
Conread position:
               
35-269
               

               
Cow position:
               
chr25:17598787-17598547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
35-271
               

               
Cow position:
               
chr25:8347216-8347453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
38-257
               

               
Cow position:
               
chr25:21895177-21894956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
38-258
               

               
Cow position:
               
chr25:22314911-22315130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 144
               

               
Conread position:
               
38-265
               

               
Cow position:
               
chr25:18294604-18294376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
38-265
               

               
Cow position:
               
chr25:20348568-20348800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
42-256
               

               
Cow position:
               
chr25:27821124-27821345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
42-257
               

               
Cow position:
               
chr25:6474386-6474166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
42-261
               

               
Cow position:
               
chr25:2110797-2111011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
42-266
               

               
Cow position:
               
chr25:12817087-12817315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
42-269
               

               
Cow position:
               
chr25:6740534-6740758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
167, 65
               

               
Conread position:
               
43-258
               

               
Cow position:
               
chr25:10366037-10365819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
46-254
               

               
Cow position:
               
chr25:20023681-20023462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
46-257
               

               
Cow position:
               
chr25:27621800-27622019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
46-260
               

               
Cow position:
               
chr25:7216546-7216763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 204
               

               
Conread position:
               
46-266
               

               
Cow position:
               
chr25:27868528-27868742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
48-269
               

               
Cow position:
               
chr25:12195605-12195385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
49-260
               

               
Cow position:
               
chr25:22297296-22297085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
50-266
               

               
Cow position:
               
chr25:14196577-14196799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
50-266
               

               
Cow position:
               
chr25:35607997-35607783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
56-265
               

               
Cow position:
               
chr25:14512844-14513049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
57-269
               

               
Cow position:
               
chr25:5572069-5571853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 133
               

               
Conread position:
               
58-265
               

               
Cow position:
               
chr25:12824285-12824081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
58-265
               

               
Cow position:
               
chr25:22203960-22203747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 209
               

               
Conread position:
               
58-266
               

               
Cow position:
               
chr25:6003261-6003052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
43, 174
               

               
Conread position:
               
58-266
               

               
Cow position:
               
chr25:17702233-17702031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
58-266
               

               
Cow position:
               
chr25:17712266-17712476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
58-266
               

               
Cow position:
               
chr25:36081605-36081816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
58-266
               

               
Cow position:
               
chr25:36535702-36535497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
58-272
               

               
Cow position:
               
chr25:21266736-21266954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
43, 208
               

               
Conread position:
               
59-242
               

               
Cow position:
               
chr25:18935144-18934957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
59-258
               

               
Cow position:
               
chr25:11131316-11131512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
59-259
               

               
Cow position:
               
chr25:24168167-24167969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
59-265
               

               
Cow position:
               
chr25:12081584-12081382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
59-266
               

               
Cow position:
               
chr25:14833922-14833719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
59-266
               

               
Cow position:
               
chr25:20007871-20008074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
59-266
               

               
Cow position:
               
chr25:35332902-35333098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
59-266
               

               
Cow position:
               
chr25:38135478-38135686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
59-267
               

               
Cow position:
               
chr25:40321561-40321357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
99, 159
               

               
Conread position:
               
59-269
               

               
Cow position:
               
chr25:20785852-20785643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
59-284
               

               
Cow position:
               
chr25:5837235-5837007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
42, 177
               

               
Conread position:
               
60-266
               

               
Cow position:
               
chr25:38981845-38982042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
61-258
               

               
Cow position:
               
chr25:9754342-9754157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
61-266
               

               
Cow position:
               
chr25:10746636-10746837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
61-266
               

               
Cow position:
               
chr25:28188215-28188007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
65-266
               

               
Cow position:
               
chr25:41354569-41354369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 153
               

               
Conread position:
               
66-265
               

               
Cow position:
               
chr25:19679080-19679282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
67-248
               

               
Cow position:
               
chr25:35612562-35612382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
67-260
               

               
Cow position:
               
chr25:36037041-36036847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
67-265
               

               
Cow position:
               
chr25:17566326-17566526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
67-266
               

               
Cow position:
               
chr25:32063583-32063788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
68-276
               

               
Cow position:
               
chr25:13099740-13099528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 210
               

               
Conread position:
               
69-258
               

               
Cow position:
               
chr25:7306039-7306233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
69-259
               

               
Cow position:
               
chr25:19129594-19129785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
7, 11
               

               
Conread position:
               
69-266
               

               
Cow position:
               
chr25:13642575-13642372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
69-269
               

               
Cow position:
               
chr25:32191412-32191611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
70-258
               

               
Cow position:
               
chr25:4547978-4547785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
70-266
               

               
Cow position:
               
chr25:16001779-16001585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
75-266
               

               
Cow position:
               
chr25:4002543-4002740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
76-269
               

               
Cow position:
               
chr25:24669682-24669494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
79-260
               

               
Cow position:
               
chr25:20211335-20211147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
81-266
               

               
Cow position:
               
chr25:18265917-18266099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
82-265
               

               
Cow position:
               
chr25:24008423-24008236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
86-252
               

               
Cow position:
               
chr25:22369151-22369319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
87-258
               

               
Cow position:
               
chr25:15377092-15377257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
89-260
               

               
Cow position:
               
chr25:7329305-7329480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 166
               

               
Conread position:
               
94-260
               

               
Cow position:
               
chr25:6256172-6256003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
99-265
               

               
Cow position:
               
chr25:10218279-10218109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
100-248
               

               
Cow position:
               
chr25:34169727-34169875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
100-262
               

               
Cow position:
               
chr25:18988149-18988317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
100-269
               

               
Cow position:
               
chr25:6961377-6961212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
100-269
               

               
Cow position:
               
chr25:36033209-36033380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
100-273
               

               
Cow position:
               
chr25:13380843-13380667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
59, 162
               

               
Conread position:
               
104-282
               

               
Cow position:
               
chr25:2595954-2596141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
108-269
               

               
Cow position:
               
chr25:12899536-12899699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
109-265
               

               
Cow position:
               
chr25:23324582-23324421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
110-252
               

               
Cow position:
               
chr25:26090029-26089889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
112-259
               

               
Cow position:
               
chr25:12319553-12319415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
118-248
               

               
Cow position:
               
chr25:16389501-16389369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
120-266
               

               
Cow position:
               
chr25:20133522-20133373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
123-266
               

               
Cow position:
               
chr25:18905677-18905825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
123-269
               

               
Cow position:
               
chr25:10331826-10331679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
126-245
               

               
Cow position:
               
chr25:22340837-22340956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
128-265
               

               
Cow position:
               
chr25:12521160-12521022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
132-266
               

               
Cow position:
               
chr25:12755686-12755551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
132-266
               

               
Cow position:
               
chr25:21042192-21042321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
134-254
               

               
Cow position:
               
chr25:32453591-32453467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
134-266
               

               
Cow position:
               
chr25:13672195-13672333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
134-266
               

               
Cow position:
               
chr25:35110323-35110186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
140-266
               

               
Cow position:
               
chr25:23323015-23323144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
142-284
               

               
Cow position:
               
chr25:36017354-36017495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
144-266
               

               
Cow position:
               
chr25:27532856-27532732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 11
               

               
Conread position:
               
149-266
               

               
Cow position:
               
chr25:17342276-17342395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
149-370
               

               
Cow position:
               
chr25:23571074-23570863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
150-266
               

               
Cow position:
               
chr25:11318833-11318951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
150-266
               

               
Cow position:
               
chr25:14931940-14931820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
153-255
               

               
Cow position:
               
chr25:15440954-15440850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
159-256
               

               
Cow position:
               
chr25:30462467-30462368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
162-256
               

               
Cow position:
               
chr25:30065045-30064951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
163-265
               

               
Cow position:
               
chr25:6121931-6121827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
164-269
               

               
Cow position:
               
chr25:26679065-26679170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
167-260
               

               
Cow position:
               
chr25:4860462-4860368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               
Show alignments to all cow chromosomes.