Cow genome map
| Conread name: | OvF4-UMC-p4mm3-014-a01 |
| Conread position: | 6-261 |
| Cow position: | chr26:16720158-16719903 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 22-236 |
| Cow position: | chr26:20218908-20218696 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 169, 11 |
| Conread position: | 22-255 |
| Cow position: | chr26:24239360-24239133 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 30-255 |
| Cow position: | chr26:755718-755940 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 156, 19 |
| Conread position: | 32-224 |
| Cow position: | chr26:12871071-12870880 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 32-234 |
| Cow position: | chr26:12662093-12662287 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 32-243 |
| Cow position: | chr26:15559142-15558931 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 32-245 |
| Cow position: | chr26:11362044-11362248 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 141, 17 |
| Conread position: | 32-248 |
| Cow position: | chr26:23591351-23591136 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 133, 17 |
| Conread position: | 32-248 |
| Cow position: | chr26:23600379-23600589 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 149, 14 |
| Conread position: | 32-255 |
| Cow position: | chr26:798890-799110 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 131, 23 |
| Conread position: | 32-255 |
| Cow position: | chr26:1621303-1621081 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 143, 16 |
| Conread position: | 32-255 |
| Cow position: | chr26:6097912-6098130 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 148, 17 |
| Conread position: | 32-255 |
| Cow position: | chr26:6843566-6843786 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 144, 17 |
| Conread position: | 32-255 |
| Cow position: | chr26:20019749-20019535 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 32-255 |
| Cow position: | chr26:20256274-20256057 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 149, 17 |
| Conread position: | 32-255 |
| Cow position: | chr26:29433888-29433666 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 144, 17 |
| Conread position: | 32-255 |
| Cow position: | chr26:30569474-30569697 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 156, 17 |
| Conread position: | 32-256 |
| Cow position: | chr26:10966354-10966575 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 34-255 |
| Cow position: | chr26:10698861-10699077 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 140, 14 |
| Conread position: | 36-255 |
| Cow position: | chr26:13556564-13556776 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 129, 13 |
| Conread position: | 36-255 |
| Cow position: | chr26:14897740-14897522 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 141, 13 |
| Conread position: | 43-241 |
| Cow position: | chr26:19347786-19347980 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 141, 17 |
| Conread position: | 43-248 |
| Cow position: | chr26:11266349-11266148 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 128, 51 |
| Conread position: | 43-260 |
| Cow position: | chr26:18918680-18918892 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 47-255 |
| Cow position: | chr26:6476038-6476243 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 56-248 |
| Cow position: | chr26:9836105-9835912 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 109, 7 |
| Conread position: | 61-255 |
| Cow position: | chr26:16905550-16905351 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 31 |
| Conread position: | 62-241 |
| Cow position: | chr26:22831410-22831591 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 62-243 |
| Cow position: | chr26:33252858-33253041 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 62-248 |
| Cow position: | chr26:8352353-8352179 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 62-255 |
| Cow position: | chr26:17428846-17429041 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 62-255 |
| Cow position: | chr26:21539022-21538827 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 30 |
| Conread position: | 62-255 |
| Cow position: | chr26:21859213-21859018 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 62-255 |
| Cow position: | chr26:26286488-26286294 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 62-257 |
| Cow position: | chr26:14487635-14487829 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 62-258 |
| Cow position: | chr26:8308125-8308322 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 124, 24 |
| Conread position: | 62-268 |
| Cow position: | chr26:25393417-25393208 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 82, 34 |
| Conread position: | 62-275 |
| Cow position: | chr26:2988361-2988570 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 185, 28 |
| Conread position: | 63-255 |
| Cow position: | chr26:1885645-1885444 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 35 |
| Conread position: | 63-255 |
| Cow position: | chr26:6837236-6837055 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 63-255 |
| Cow position: | chr26:8653502-8653689 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 63-255 |
| Cow position: | chr26:9100364-9100560 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 29 |
| Conread position: | 63-255 |
| Cow position: | chr26:34015466-34015271 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 29 |
| Conread position: | 64-242 |
| Cow position: | chr26:13806402-13806582 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 64-243 |
| Cow position: | chr26:800306-800124 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 64-243 |
| Cow position: | chr26:4440144-4440320 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 64-243 |
| Cow position: | chr26:22692012-22691832 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 64-247 |
| Cow position: | chr26:1673405-1673220 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 28 |
| Conread position: | 64-248 |
| Cow position: | chr26:4748538-4748723 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 64-248 |
| Cow position: | chr26:15146121-15145935 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:1342668-1342861 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 112, 38 |
| Conread position: | 64-255 |
| Cow position: | chr26:2487130-2486937 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:2770515-2770712 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 64-255 |
| Cow position: | chr26:3026813-3027006 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:3833661-3833468 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:5430185-5430378 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:7677361-7677168 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:8084453-8084260 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 122, 29 |
| Conread position: | 64-255 |
| Cow position: | chr26:8738790-8738983 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 112, 38 |
| Conread position: | 64-255 |
| Cow position: | chr26:9070189-9069996 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 113, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:9115665-9115472 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:11537452-11537259 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:12584911-12585104 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:13183937-13183744 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:18383791-18383975 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 64-255 |
| Cow position: | chr26:18803742-18803935 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 64-255 |
| Cow position: | chr26:34265591-34265398 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 64-255 |
| Cow position: | chr26:35190921-35191114 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 112, 28 |
| Conread position: | 65-255 |
| Cow position: | chr26:887746-887555 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 74, 27 |
| Conread position: | 65-255 |
| Cow position: | chr26:3231092-3230900 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 111, 37 |
| Conread position: | 66-248 |
| Cow position: | chr26:14364637-14364819 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 110, 7 |
| Conread position: | 66-255 |
| Cow position: | chr26:2202153-2201962 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 26 |
| Conread position: | 67-255 |
| Cow position: | chr26:7459338-7459528 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 25 |
| Conread position: | 67-255 |
| Cow position: | chr26:9825507-9825696 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 111, 25 |
| Conread position: | 70-255 |
| Cow position: | chr26:387301-387114 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 22 |
| Conread position: | 72-255 |
| Cow position: | chr26:30594011-30594195 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 73-255 |
| Cow position: | chr26:7558998-7559182 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 78-255 |
| Cow position: | chr26:11269826-11269655 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 109-255 |
| Cow position: | chr26:581180-581331 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 109-255 |
| Cow position: | chr26:30752754-30752905 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 114-246 |
| Cow position: | chr26:4599623-4599760 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 52 |
| Conread position: | 121-247 |
| Cow position: | chr26:9867771-9867902 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 67, 113 |
Show alignments to all cow chromosomes.