Cow genome map

Conread name: OvF4-UMC-p4mm3-014-a01

Conread position: 21-255
Cow position: chr27:30176892-30177125 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 144, 12

Conread position: 29-248
Cow position: chr27:8262452-8262233 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 147, 5

Conread position: 30-255
Cow position: chr27:2936435-2936215 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 138, 19

Conread position: 30-255
Cow position: chr27:19388577-19388804 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 152, 19

Conread position: 30-255
Cow position: chr27:21452058-21451832 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 140, 18

Conread position: 30-255
Cow position: chr27:25784151-25784373 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 151, 19

Conread position: 32-241
Cow position: chr27:2557383-2557590 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 142, 17

Conread position: 32-241
Cow position: chr27:28907624-28907826 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 152, 17

Conread position: 32-247
Cow position: chr27:13182679-13182888 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 149, 16

Conread position: 32-247
Cow position: chr27:28924490-28924283 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 17

Conread position: 32-248
Cow position: chr27:26856651-26856436 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 145, 25

Conread position: 32-248
Cow position: chr27:27527647-27527429 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 144, 17

Conread position: 32-248
Cow position: chr27:30036489-30036267 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 133, 17

Conread position: 32-255
Cow position: chr27:344319-344541 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 145, 17

Conread position: 32-255
Cow position: chr27:4982971-4982761 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 32-255
Cow position: chr27:8973059-8972833 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 63

Conread position: 32-255
Cow position: chr27:9333278-9333056 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 142, 17

Conread position: 32-255
Cow position: chr27:10384041-10383820 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 145, 16

Conread position: 32-255
Cow position: chr27:15033281-15033502 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 145, 17

Conread position: 32-255
Cow position: chr27:19931946-19932167 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 145, 17

Conread position: 32-255
Cow position: chr27:20001205-20001427 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 144, 17

Conread position: 32-255
Cow position: chr27:24295649-24295871 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 145, 17

Conread position: 32-255
Cow position: chr27:26330543-26330321 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 145, 17

Conread position: 32-255
Cow position: chr27:30306655-30306880 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 144, 17

Conread position: 32-256
Cow position: chr27:3231927-3232146 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 149, 17

Conread position: 32-256
Cow position: chr27:13409609-13409383 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 17

Conread position: 32-258
Cow position: chr27:13901734-13901510 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 137, 16

Conread position: 43-247
Cow position: chr27:15866705-15866906 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 18

Conread position: 60-255
Cow position: chr27:12239653-12239456 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 117, 32

Conread position: 60-267
Cow position: chr27:12173523-12173319 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 115, 33

Conread position: 61-243
Cow position: chr27:28984350-28984166 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 120, 31

Conread position: 61-255
Cow position: chr27:9989296-9989490 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 116, 31

Conread position: 61-255
Cow position: chr27:13422579-13422775 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 115, 31

Conread position: 61-255
Cow position: chr27:16045314-16045118 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 115, 5

Conread position: 62-219
Cow position: chr27:6019139-6018977 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 30

Conread position: 62-227
Cow position: chr27:26545339-26545176 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 122, 30

Conread position: 62-233
Cow position: chr27:7084684-7084857 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 115, 30

Conread position: 62-246
Cow position: chr27:22400366-22400553 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 15

Conread position: 62-248
Cow position: chr27:2682106-2681916 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 101, 30

Conread position: 62-248
Cow position: chr27:4805363-4805186 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 62-248
Cow position: chr27:10324347-10324533 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 126, 24

Conread position: 62-248
Cow position: chr27:15406203-15406018 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 30

Conread position: 62-255
Cow position: chr27:8187416-8187225 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 121, 30

Conread position: 62-255
Cow position: chr27:8201520-8201324 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 30

Conread position: 62-255
Cow position: chr27:9090226-9090028 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 112, 30

Conread position: 62-255
Cow position: chr27:11490204-11490011 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 159
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 115, 30

Conread position: 62-255
Cow position: chr27:19523126-19523320 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 30

Conread position: 62-255
Cow position: chr27:20811000-20810805 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 30

Conread position: 62-255
Cow position: chr27:27291977-27291782 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 115, 30

Conread position: 62-256
Cow position: chr27:11256103-11256298 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 112, 30

Conread position: 62-256
Cow position: chr27:11481515-11481319 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 115, 30

Conread position: 63-236
Cow position: chr27:4331156-4331331 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 125, 39

Conread position: 63-248
Cow position: chr27:5853330-5853144 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 110, 29

Conread position: 63-255
Cow position: chr27:8592956-8592775 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 29

Conread position: 63-273
Cow position: chr27:11413973-11414177 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 64-218
Cow position: chr27:16551048-16551204 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 113, 28

Conread position: 64-225
Cow position: chr27:24570858-24571019 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 110, 28

Conread position: 64-243
Cow position: chr27:8959435-8959615 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 112, 28

Conread position: 64-244
Cow position: chr27:12147474-12147292 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 28

Conread position: 64-247
Cow position: chr27:13844131-13844316 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 113, 29

Conread position: 64-248
Cow position: chr27:8202418-8202604 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 112, 28

Conread position: 64-255
Cow position: chr27:165338-165530 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 26

Conread position: 64-255
Cow position: chr27:723937-723744 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 112, 28

Conread position: 64-255
Cow position: chr27:2001426-2001234 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 112, 28

Conread position: 64-255
Cow position: chr27:3650063-3649870 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 112, 28

Conread position: 64-255
Cow position: chr27:3653118-3653311 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 112, 28

Conread position: 64-255
Cow position: chr27:12006730-12006537 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 112, 28

Conread position: 64-255
Cow position: chr27:13353887-13353695 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 28

Conread position: 64-255
Cow position: chr27:16030815-16031008 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 112, 28

Conread position: 64-255
Cow position: chr27:19487402-19487596 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 112, 28

Conread position: 64-255
Cow position: chr27:22797077-22797270 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 112, 28

Conread position: 64-255
Cow position: chr27:29035800-29035993 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 112, 28

Conread position: 65-241
Cow position: chr27:26785393-26785220 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 28

Conread position: 65-255
Cow position: chr27:8291430-8291230 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 27

Conread position: 65-255
Cow position: chr27:13317136-13316948 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 27

Conread position: 65-255
Cow position: chr27:27728905-27729102 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 129, 58

Conread position: 66-248
Cow position: chr27:15633763-15633947 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 111, 26

Conread position: 67-241
Cow position: chr27:14643274-14643102 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 25

Conread position: 67-248
Cow position: chr27:9262699-9262881 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 109, 30

Conread position: 67-248
Cow position: chr27:11672815-11673002 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 25

Conread position: 69-258
Cow position: chr27:21283670-21283864 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 107, 23

Conread position: 70-268
Cow position: chr27:3751786-3751590 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 23

Conread position: 73-255
Cow position: chr27:3990228-3990411 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 104, 19

Conread position: 78-260
Cow position: chr27:23454542-23454363 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 14

Conread position: 79-255
Cow position: chr27:9970738-9970560 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 13

Conread position: 83-219
Cow position: chr27:670700-670843 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 9

Conread position: 103-255
Cow position: chr27:27192805-27192956 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 78, 6

Conread position: 109-255
Cow position: chr27:816223-816374 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 132-268
Cow position: chr27:1502027-1501889 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 34

Show alignments to all cow chromosomes.