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Cow genome map

           
Conread name:
           
OvF4-UMC-p4mm3-014-a01
        

               
Conread position:
               
22-248
               

               
Cow position:
               
chr5:19470800-19471025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
155, 11
               

               
Conread position:
               
22-255
               

               
Cow position:
               
chr5:5786874-5787105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
154, 11
               

               
Conread position:
               
22-255
               

               
Cow position:
               
chr5:8996559-8996786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
155, 11
               

               
Conread position:
               
22-255
               

               
Cow position:
               
chr5:39448097-39448322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
154, 11
               

               
Conread position:
               
22-255
               

               
Cow position:
               
chr5:54714311-54714541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
22-261
               

               
Cow position:
               
chr5:54722105-54721872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
29-248
               

               
Cow position:
               
chr5:72857325-72857107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
147, 20
               

               
Conread position:
               
30-248
               

               
Cow position:
               
chr5:17425700-17425918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
147, 19
               

               
Conread position:
               
30-255
               

               
Cow position:
               
chr5:25913167-25912943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
147, 19
               

               
Conread position:
               
30-255
               

               
Cow position:
               
chr5:41980834-41980615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
154, 19
               

               
Conread position:
               
30-255
               

               
Cow position:
               
chr5:44276044-44275820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
30-255
               

               
Cow position:
               
chr5:49221049-49221274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
30-258
               

               
Cow position:
               
chr5:33189654-33189435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
30-260
               

               
Cow position:
               
chr5:31917048-31916831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
30-266
               

               
Cow position:
               
chr5:34192369-34192135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
31-246
               

               
Cow position:
               
chr5:63312071-63312290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
31-248
               

               
Cow position:
               
chr5:22857185-22857401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
31-255
               

               
Cow position:
               
chr5:6839732-6839963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
31-255
               

               
Cow position:
               
chr5:45941548-45941773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
31-255
               

               
Cow position:
               
chr5:58770424-58770647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
32-221
               

               
Cow position:
               
chr5:20408613-20408802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
144, 14
               

               
Conread position:
               
32-242
               

               
Cow position:
               
chr5:1395013-1395224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
32-243
               

               
Cow position:
               
chr5:4388628-4388418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
32-247
               

               
Cow position:
               
chr5:31634873-31634669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
138, 16
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:693999-693789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:6670733-6670941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:7175745-7175530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:14551153-14551369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:27656301-27656091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:28016503-28016288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:37609562-37609777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:40346661-40346870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:47560113-47560328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 17
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:47704712-47704926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:48409011-48409217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:52829340-52829554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:53185057-53185271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:72046225-72046432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:1338477-1338696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:12640808-12641027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:14630489-14630705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:14636132-14636354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:28223889-28223664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:28928341-28928561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:29969055-29968833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:31145351-31145569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
149, 22
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:31217535-31217318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:32964613-32964835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:34637890-34637664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:34682916-34683137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:43437496-43437717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:46295237-46295460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
157, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:46672054-46671828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:47343321-47343098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:47590148-47590369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 14
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:49116904-49117126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:50728750-50728528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:51070628-51070409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
138, 8
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:55631511-55631289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 17
               

               
Conread position:
               
32-255
               

               
Cow position:
               
chr5:66257070-66256857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
32-256
               

               
Cow position:
               
chr5:51746665-51746442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
144, 17
               

               
Conread position:
               
32-260
               

               
Cow position:
               
chr5:39815864-39816084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
32-263
               

               
Cow position:
               
chr5:37626293-37626063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
32-267
               

               
Cow position:
               
chr5:27549067-27549299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
32-267
               

               
Cow position:
               
chr5:38379433-38379205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
144, 8
               

               
Conread position:
               
33-246
               

               
Cow position:
               
chr5:17027511-17027299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
133, 13
               

               
Conread position:
               
33-255
               

               
Cow position:
               
chr5:46625830-46626052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
153, 13
               

               
Conread position:
               
36-248
               

               
Cow position:
               
chr5:34886227-34886440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
36-257
               

               
Cow position:
               
chr5:23647992-23648207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
145, 12
               

               
Conread position:
               
41-256
               

               
Cow position:
               
chr5:25495970-25496185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
139, 31
               

               
Conread position:
               
42-255
               

               
Cow position:
               
chr5:54868655-54868441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
43-255
               

               
Cow position:
               
chr5:19978481-19978689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
59-243
               

               
Cow position:
               
chr5:18667730-18667544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
60-255
               

               
Cow position:
               
chr5:7396665-7396468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
60-255
               

               
Cow position:
               
chr5:33775362-33775561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
61-211
               

               
Cow position:
               
chr5:6286931-6287078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
61-246
               

               
Cow position:
               
chr5:16125098-16125284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
61-248
               

               
Cow position:
               
chr5:48225164-48225347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
61-255
               

               
Cow position:
               
chr5:25920374-25920562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
61-255
               

               
Cow position:
               
chr5:27179056-27178860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
61-255
               

               
Cow position:
               
chr5:45705432-45705236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
61-256
               

               
Cow position:
               
chr5:4753712-4753909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
61-267
               

               
Cow position:
               
chr5:28700516-28700717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
62-227
               

               
Cow position:
               
chr5:37758421-37758587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
62-242
               

               
Cow position:
               
chr5:34709189-34709007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
62-243
               

               
Cow position:
               
chr5:29742138-29742324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
62-245
               

               
Cow position:
               
chr5:41548132-41548316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
62-246
               

               
Cow position:
               
chr5:40928606-40928792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
62-247
               

               
Cow position:
               
chr5:41608638-41608467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
62-248
               

               
Cow position:
               
chr5:41951649-41951834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
62-248
               

               
Cow position:
               
chr5:50599477-50599289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
62-248
               

               
Cow position:
               
chr5:55722949-55722761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
62-248
               

               
Cow position:
               
chr5:70593582-70593770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:279760-279955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:1059147-1059342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:1105457-1105653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:2917875-2917686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:3551292-3551483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:6151412-6151607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:7498565-7498760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:18491832-18491633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:18901733-18901544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:21188350-21188159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:21189637-21189443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:21547872-21548066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:24102070-24101875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:26096691-26096496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:30582745-30582551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:34300296-34300105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:34527974-34527791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:43984504-43984309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:54785689-54785883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:72007478-72007668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
62-255
               

               
Cow position:
               
chr5:73485468-73485661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
62-256
               

               
Cow position:
               
chr5:19969630-19969818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
62-257
               

               
Cow position:
               
chr5:68593840-68593643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
62-258
               

               
Cow position:
               
chr5:62159502-62159705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
124, 30
               

               
Conread position:
               
62-260
               

               
Cow position:
               
chr5:42744205-42744010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
62-313
               

               
Cow position:
               
chr5:35762702-35762459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
63-243
               

               
Cow position:
               
chr5:51309362-51309189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
63-245
               

               
Cow position:
               
chr5:65593313-65593130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
63-248
               

               
Cow position:
               
chr5:46734860-46735045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
63-255
               

               
Cow position:
               
chr5:51684201-51684392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
63-255
               

               
Cow position:
               
chr5:52041070-52041264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
63-255
               

               
Cow position:
               
chr5:56442675-56442483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
63-257
               

               
Cow position:
               
chr5:25231614-25231808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
64-239
               

               
Cow position:
               
chr5:29633566-29633743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-242
               

               
Cow position:
               
chr5:10479224-10479408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
64-242
               

               
Cow position:
               
chr5:27907050-27907230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-243
               

               
Cow position:
               
chr5:442891-443072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-243
               

               
Cow position:
               
chr5:4041555-4041374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-243
               

               
Cow position:
               
chr5:37380504-37380323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 28
               

               
Conread position:
               
64-243
               

               
Cow position:
               
chr5:46816685-46816866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-245
               

               
Cow position:
               
chr5:39936516-39936334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
64-245
               

               
Cow position:
               
chr5:45606434-45606249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
64-246
               

               
Cow position:
               
chr5:32697390-32697557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
64-248
               

               
Cow position:
               
chr5:445897-445711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-248
               

               
Cow position:
               
chr5:6571837-6572019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
64-248
               

               
Cow position:
               
chr5:6772983-6772797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 38
               

               
Conread position:
               
64-248
               

               
Cow position:
               
chr5:29122614-29122796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
116, 28
               

               
Conread position:
               
64-248
               

               
Cow position:
               
chr5:32164520-32164704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
64-248
               

               
Cow position:
               
chr5:36410022-36410208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 28
               

               
Conread position:
               
64-248
               

               
Cow position:
               
chr5:51165891-51166078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
64-248
               

               
Cow position:
               
chr5:58461278-58461461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:407859-407666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:4166042-4165852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:4683083-4683276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:4962969-4963161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:5106641-5106448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:6694952-6694759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:12325171-12325364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:18118557-18118750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:23565681-23565488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:26053149-26052956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:27058221-27058414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:28013275-28013082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:28375084-28375274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:29634847-29634654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:34669677-34669864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:36369574-36369767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:39216673-39216480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:39363290-39363097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:41586692-41586499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:42283581-42283388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:43350212-43350019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:45179429-45179622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:47564899-47565092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:47565367-47565560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:48026686-48026493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:49103242-49103049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:52822790-52822983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:54454905-54454720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:54951699-54951897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:57335946-57336139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:58199427-58199234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:58900626-58900819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:59064861-59064668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:59147025-59146833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:67814280-67814087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:68273431-68273624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-255
               

               
Cow position:
               
chr5:75754706-75754899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
64-256
               

               
Cow position:
               
chr5:27691402-27691204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
64-264
               

               
Cow position:
               
chr5:34584767-34584967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
65-241
               

               
Cow position:
               
chr5:58192332-58192154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
65-243
               

               
Cow position:
               
chr5:825625-825445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
65-247
               

               
Cow position:
               
chr5:42676652-42676476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 27
               

               
Conread position:
               
65-255
               

               
Cow position:
               
chr5:1780173-1780356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
65-255
               

               
Cow position:
               
chr5:7192838-7192647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
65-255
               

               
Cow position:
               
chr5:46677030-46676838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
65-255
               

               
Cow position:
               
chr5:64778584-64778776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
66-245
               

               
Cow position:
               
chr5:33064539-33064715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
66-247
               

               
Cow position:
               
chr5:3204246-3204063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
67-227
               

               
Cow position:
               
chr5:10261009-10261171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
67-247
               

               
Cow position:
               
chr5:24221404-24221228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
67-248
               

               
Cow position:
               
chr5:27491389-27491209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
67-255
               

               
Cow position:
               
chr5:23845139-23845327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
67-255
               

               
Cow position:
               
chr5:33472113-33472303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
67-255
               

               
Cow position:
               
chr5:49565979-49565789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
67-256
               

               
Cow position:
               
chr5:25253813-25253626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
67-256
               

               
Cow position:
               
chr5:40270435-40270618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
67-257
               

               
Cow position:
               
chr5:58004640-58004454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
67-278
               

               
Cow position:
               
chr5:9676215-9676422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
69-248
               

               
Cow position:
               
chr5:40712067-40712241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
69-255
               

               
Cow position:
               
chr5:70348821-70348634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
69-257
               

               
Cow position:
               
chr5:43991689-43991505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
69-275
               

               
Cow position:
               
chr5:13258991-13258794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
70-248
               

               
Cow position:
               
chr5:7140683-7140868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
70-283
               

               
Cow position:
               
chr5:66338259-66338046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
201, 26
               

               
Conread position:
               
74-273
               

               
Cow position:
               
chr5:15722906-15723108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
78-243
               

               
Cow position:
               
chr5:4434100-4434267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
78-246
               

               
Cow position:
               
chr5:40827975-40828146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr5:54136233-54136413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr5:57986899-57986720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
79-255
               

               
Cow position:
               
chr5:75755982-75755798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
82-255
               

               
Cow position:
               
chr5:47855226-47855052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
93-255
               

               
Cow position:
               
chr5:6576199-6576366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
102-255
               

               
Cow position:
               
chr5:742081-742235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
106-273
               

               
Cow position:
               
chr5:32810651-32810815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 134
               

               
Conread position:
               
109-255
               

               
Cow position:
               
chr5:12212910-12212758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
109-255
               

               
Cow position:
               
chr5:12337649-12337499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
110-244
               

               
Cow position:
               
chr5:18404684-18404822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
111-255
               

               
Cow position:
               
chr5:6585079-6585229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
115-248
               

               
Cow position:
               
chr5:30294667-30294535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
121-255
               

               
Cow position:
               
chr5:16085446-16085585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 45
               
Show alignments to all cow chromosomes.