Cow genome map

Conread name: OvF6-UMC-p6mm3-003-h04

Conread position: 78-281
Cow position: chr20:354865-354671 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 78-293
Cow position: chr20:20125000-20124792 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 82-290
Cow position: chr20:35442247-35442045 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 79

Conread position: 85-292
Cow position: chr20:23936145-23935940 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 132, 66

Conread position: 87-294
Cow position: chr20:39016831-39016629 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 63, 0

Conread position: 89-294
Cow position: chr20:37357901-37358099 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 90-293
Cow position: chr20:7417123-7416921 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 72

Conread position: 93-283
Cow position: chr20:18487972-18488156 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 93-292
Cow position: chr20:8021173-8021375 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 61

Conread position: 93-293
Cow position: chr20:34083762-34083960 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 67

Conread position: 93-294
Cow position: chr20:24711887-24712080 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 56

Conread position: 94-271
Cow position: chr20:36806569-36806738 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 60

Conread position: 94-280
Cow position: chr20:22959299-22959118 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 182, 58

Conread position: 94-281
Cow position: chr20:33067312-33067132 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 0

Conread position: 94-285
Cow position: chr20:12126256-12126070 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 94-286
Cow position: chr20:7426149-7425966 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 94-291
Cow position: chr20:11135713-11135515 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 138

Conread position: 94-292
Cow position: chr20:5950595-5950402 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 94-292
Cow position: chr20:12581906-12581718 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 94-292
Cow position: chr20:14980461-14980269 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 44

Conread position: 94-292
Cow position: chr20:40303835-40303644 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 27

Conread position: 94-293
Cow position: chr20:16941239-16941043 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 16

Conread position: 94-293
Cow position: chr20:21291708-21291908 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 138, 60

Conread position: 94-293
Cow position: chr20:29845099-29845294 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 68

Conread position: 94-294
Cow position: chr20:3141622-3141815 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 94-294
Cow position: chr20:10200394-10200590 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 193, 59

Conread position: 94-294
Cow position: chr20:11008218-11008413 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 94-294
Cow position: chr20:12995957-12995753 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 59

Conread position: 94-294
Cow position: chr20:14282968-14283163 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 60, 0

Conread position: 94-294
Cow position: chr20:19328436-19328638 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 57

Conread position: 94-294
Cow position: chr20:25021476-25021671 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 56

Conread position: 94-294
Cow position: chr20:27315030-27315216 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 94-294
Cow position: chr20:34097906-34097708 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 59

Conread position: 95-294
Cow position: chr20:5814616-5814805 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 97-277
Cow position: chr20:29990396-29990222 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 97-282
Cow position: chr20:20967372-20967547 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 160, 55

Conread position: 97-288
Cow position: chr20:33076772-33076587 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 97-290
Cow position: chr20:23590696-23590514 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 97-291
Cow position: chr20:11499063-11499240 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 97-292
Cow position: chr20:30744670-30744483 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 97-293
Cow position: chr20:2316374-2316188 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 152, 57

Conread position: 97-293
Cow position: chr20:5703522-5703711 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 97-294
Cow position: chr20:5364981-5365168 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 0

Conread position: 97-294
Cow position: chr20:6248550-6248359 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 97-294
Cow position: chr20:7934335-7934518 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 97-294
Cow position: chr20:9034165-9033976 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 97-294
Cow position: chr20:11920679-11920493 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 97-294
Cow position: chr20:17370200-17370005 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 43

Conread position: 97-294
Cow position: chr20:30639732-30639538 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 112, 55

Conread position: 97-294
Cow position: chr20:30755331-30755523 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 97-294
Cow position: chr20:35741819-35742011 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 98-273
Cow position: chr20:18831826-18831661 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 98-292
Cow position: chr20:20984044-20984235 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 55

Conread position: 98-293
Cow position: chr20:34202687-34202881 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 134, 42

Conread position: 98-294
Cow position: chr20:14433370-14433180 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 56

Conread position: 98-294
Cow position: chr20:17251770-17251959 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 98-294
Cow position: chr20:39417849-39417663 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 99-293
Cow position: chr20:28249233-28249422 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 100-293
Cow position: chr20:4892065-4891879 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 53

Conread position: 100-293
Cow position: chr20:19201585-19201773 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 100-293
Cow position: chr20:34221533-34221721 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 52

Conread position: 102-294
Cow position: chr20:6054453-6054267 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 50, 0

Conread position: 103-285
Cow position: chr20:20459649-20459823 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 103-294
Cow position: chr20:25464988-25464806 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 107-294
Cow position: chr20:22851539-22851716 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 108-286
Cow position: chr20:16291750-16291923 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 108-292
Cow position: chr20:5078334-5078515 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 44

Conread position: 109-293
Cow position: chr20:8679599-8679421 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 109-294
Cow position: chr20:17544687-17544867 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 112-290
Cow position: chr20:20898524-20898353 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 112-293
Cow position: chr20:1824562-1824392 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 112-293
Cow position: chr20:27323332-27323508 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 114-293
Cow position: chr20:33435087-33434920 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 116-294
Cow position: chr20:297937-297764 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 12

Conread position: 160-285
Cow position: chr20:36741572-36741693 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 163-293
Cow position: chr20:30203415-30203550 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 165-277
Cow position: chr20:30817632-30817744 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 165-291
Cow position: chr20:17524386-17524512 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 165-293
Cow position: chr20:13876597-13876470 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 165-293
Cow position: chr20:18763248-18763376 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 165-293
Cow position: chr20:24883250-24883121 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 165-293
Cow position: chr20:28935531-28935403 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 165-293
Cow position: chr20:29754890-29755017 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 165-293
Cow position: chr20:40442353-40442224 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 165-294
Cow position: chr20:4945140-4945010 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 165-294
Cow position: chr20:14460495-14460624 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 165-294
Cow position: chr20:14739707-14739580 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 23, 0

Conread position: 165-294
Cow position: chr20:36097634-36097763 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 167-293
Cow position: chr20:23879991-23879867 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 167-294
Cow position: chr20:10486242-10486116 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 0

Conread position: 168-288
Cow position: chr20:20892561-20892441 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 176-290
Cow position: chr20:18500652-18500766 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 176-292
Cow position: chr20:26055102-26054986 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 176-292
Cow position: chr20:33557518-33557633 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 176-293
Cow position: chr20:34918530-34918647 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 176-294
Cow position: chr20:11909562-11909445 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 0

Show alignments to all cow chromosomes.