Cow genome map

Conread name: OvF6-UMC-p6mm3-003-h04

Conread position: 61-293
Cow position: chr23:6672662-6672429 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 38

Conread position: 78-292
Cow position: chr23:24704276-24704481 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 81

Conread position: 79-290
Cow position: chr23:21423760-21423962 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 80-292
Cow position: chr23:33711753-33711960 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 61

Conread position: 85-293
Cow position: chr23:809504-809706 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 75

Conread position: 86-289
Cow position: chr23:37948686-37948884 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 74

Conread position: 90-284
Cow position: chr23:18416047-18415867 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 90-294
Cow position: chr23:5436999-5436800 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 197, 63

Conread position: 93-294
Cow position: chr23:20397457-20397267 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 94-258
Cow position: chr23:306530-306689 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 94-262
Cow position: chr23:20563704-20563865 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 94-274
Cow position: chr23:1798118-1798293 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 94-285
Cow position: chr23:57156-56964 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 136, 65

Conread position: 94-289
Cow position: chr23:4343489-4343679 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 94-290
Cow position: chr23:3835587-3835385 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 36

Conread position: 94-291
Cow position: chr23:4726802-4726989 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 94-291
Cow position: chr23:12363610-12363422 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 94-292
Cow position: chr23:9734418-9734618 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 30

Conread position: 94-293
Cow position: chr23:799671-799467 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 94-293
Cow position: chr23:1655902-1656093 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 94-293
Cow position: chr23:8698428-8698624 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 59

Conread position: 94-293
Cow position: chr23:22530431-22530238 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 94-294
Cow position: chr23:307463-307658 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 66, 0

Conread position: 94-294
Cow position: chr23:11129241-11129436 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 173, 58

Conread position: 94-294
Cow position: chr23:18739457-18739261 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 59

Conread position: 94-294
Cow position: chr23:32621291-32621488 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 69, 57

Conread position: 94-294
Cow position: chr23:40738011-40737815 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 58

Conread position: 95-293
Cow position: chr23:29330315-29330509 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 58

Conread position: 95-294
Cow position: chr23:187187-187379 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 97-251
Cow position: chr23:33622139-33621991 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 97-267
Cow position: chr23:1701182-1701347 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 97-282
Cow position: chr23:4972777-4972953 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 97-285
Cow position: chr23:3234771-3234587 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 102, 63

Conread position: 97-288
Cow position: chr23:16582899-16582713 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 97-292
Cow position: chr23:12405809-12405623 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 97-293
Cow position: chr23:4003657-4003848 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 97-293
Cow position: chr23:5436632-5436441 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 97-293
Cow position: chr23:16690057-16689866 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 97-293
Cow position: chr23:35512253-35512058 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 134, 25

Conread position: 97-294
Cow position: chr23:3244903-3244715 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 57

Conread position: 97-294
Cow position: chr23:11081267-11081458 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 97-294
Cow position: chr23:36200415-36200599 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 98-252
Cow position: chr23:3979751-3979601 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 63

Conread position: 98-285
Cow position: chr23:21336472-21336278 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 98-291
Cow position: chr23:17012727-17012545 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 98-292
Cow position: chr23:1480652-1480840 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 98-292
Cow position: chr23:22804736-22804920 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 55

Conread position: 98-293
Cow position: chr23:7856771-7856961 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 98-293
Cow position: chr23:20557833-20557643 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 98-293
Cow position: chr23:34356654-34356840 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 98-294
Cow position: chr23:1759258-1759447 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 98-294
Cow position: chr23:2471014-2471205 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 98-294
Cow position: chr23:41348612-41348428 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 99-284
Cow position: chr23:24779530-24779350 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 99-293
Cow position: chr23:5617586-5617774 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 99-293
Cow position: chr23:13137923-13137740 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 99-293
Cow position: chr23:33232689-33232501 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 100-291
Cow position: chr23:25864686-25864497 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 42

Conread position: 100-294
Cow position: chr23:38041-38230 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 40

Conread position: 103-294
Cow position: chr23:9726525-9726339 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 105-292
Cow position: chr23:29626435-29626624 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 54

Conread position: 108-293
Cow position: chr23:18611743-18611564 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 108-293
Cow position: chr23:35239373-35239550 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 108-294
Cow position: chr23:11369250-11369420 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 109-285
Cow position: chr23:2395575-2395407 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 109-293
Cow position: chr23:28529932-28529752 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 44

Conread position: 110-294
Cow position: chr23:30617455-30617276 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 110-294
Cow position: chr23:39056779-39056958 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 31

Conread position: 112-294
Cow position: chr23:4416262-4416085 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 112-294
Cow position: chr23:17462615-17462792 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 112-294
Cow position: chr23:18489682-18489852 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 112-294
Cow position: chr23:28580561-28580382 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 40

Conread position: 116-293
Cow position: chr23:3967530-3967355 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 35

Conread position: 125-294
Cow position: chr23:4802997-4803163 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 124, 35

Conread position: 160-292
Cow position: chr23:2563731-2563862 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 160-293
Cow position: chr23:35656476-35656608 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 160-294
Cow position: chr23:18387522-18387387 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 164-294
Cow position: chr23:1647912-1648039 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 165-291
Cow position: chr23:2186991-2186865 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 165-292
Cow position: chr23:10675925-10676052 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 165-292
Cow position: chr23:26975391-26975269 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 165-293
Cow position: chr23:1337235-1337108 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 165-293
Cow position: chr23:3270372-3270498 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 165-293
Cow position: chr23:3890501-3890373 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 39

Conread position: 165-293
Cow position: chr23:4291428-4291556 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 165-293
Cow position: chr23:9876925-9876800 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 69

Conread position: 165-293
Cow position: chr23:13836793-13836922 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 165-293
Cow position: chr23:27307819-27307947 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 165-294
Cow position: chr23:2110850-2110978 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 165-294
Cow position: chr23:4465893-4465763 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 165-294
Cow position: chr23:4521811-4521681 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 165-294
Cow position: chr23:17792351-17792224 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 165-294
Cow position: chr23:29607145-29607274 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 165-294
Cow position: chr23:32126376-32126505 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 166-293
Cow position: chr23:35527154-35527280 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 167-294
Cow position: chr23:16613533-16613406 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 169-292
Cow position: chr23:40542194-40542072 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 169-293
Cow position: chr23:21539232-21539356 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 176-293
Cow position: chr23:10853130-10853246 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 176-294
Cow position: chr23:39302776-39302894 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 176-294
Cow position: chr23:39813584-39813702 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 179-291
Cow position: chr23:19822381-19822269 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 179-293
Cow position: chr23:1739542-1739656 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 181-294
Cow position: chr23:1725429-1725542 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.