Cow genome map

Conread name: OvF6-UMC-p6mm3-003-h04

Conread position: 74-292
Cow position: chr24:44896000-44896212 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 80-293
Cow position: chr24:27066196-27066402 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 78

Conread position: 84-285
Cow position: chr24:8676794-8676989 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 87-292
Cow position: chr24:27553070-27553271 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 99, 7

Conread position: 88-294
Cow position: chr24:40055536-40055339 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 90-282
Cow position: chr24:30229450-30229635 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 90, 70

Conread position: 90-293
Cow position: chr24:2359209-2359013 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 29

Conread position: 92-291
Cow position: chr24:2261644-2261840 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 11

Conread position: 93-292
Cow position: chr24:13888682-13888876 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 11

Conread position: 93-293
Cow position: chr24:10125852-10126051 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 129

Conread position: 93-293
Cow position: chr24:16640889-16641085 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 48

Conread position: 93-294
Cow position: chr24:20323522-20323325 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 117, 57

Conread position: 93-294
Cow position: chr24:22567081-22567279 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 44

Conread position: 94-283
Cow position: chr24:161984-162168 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 94-284
Cow position: chr24:18741591-18741402 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 138, 63

Conread position: 94-285
Cow position: chr24:44987394-44987208 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 94-286
Cow position: chr24:32891063-32890883 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 94-291
Cow position: chr24:16089209-16089399 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 136, 55

Conread position: 94-291
Cow position: chr24:39523468-39523280 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 94-292
Cow position: chr24:2992898-2992709 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 94-292
Cow position: chr24:5152504-5152697 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 94-292
Cow position: chr24:13626264-13626457 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 57

Conread position: 94-292
Cow position: chr24:17104589-17104401 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 94-292
Cow position: chr24:26001368-26001558 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 94-292
Cow position: chr24:30314045-30313858 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 94-293
Cow position: chr24:3493865-3494053 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 94-293
Cow position: chr24:20801365-20801173 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 94-293
Cow position: chr24:21606692-21606504 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 94-293
Cow position: chr24:33238284-33238082 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 118, 58

Conread position: 94-293
Cow position: chr24:33944382-33944578 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 138, 60

Conread position: 94-293
Cow position: chr24:36036073-36035879 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 31

Conread position: 94-293
Cow position: chr24:42984372-42984567 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 106, 59

Conread position: 94-294
Cow position: chr24:29677935-29677736 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 96, 58

Conread position: 94-294
Cow position: chr24:30483967-30483771 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 134

Conread position: 94-294
Cow position: chr24:35310702-35310900 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 62

Conread position: 95-272
Cow position: chr24:7113204-7113384 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 57

Conread position: 97-283
Cow position: chr24:6742205-6742387 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 143, 56

Conread position: 97-283
Cow position: chr24:26880737-26880917 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 97-283
Cow position: chr24:35631961-35632143 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 62

Conread position: 97-286
Cow position: chr24:18485010-18484828 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 115, 58

Conread position: 97-289
Cow position: chr24:28342340-28342530 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 55

Conread position: 97-290
Cow position: chr24:19637567-19637756 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 117

Conread position: 97-293
Cow position: chr24:11836420-11836229 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 97-293
Cow position: chr24:17309153-17308969 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 97-293
Cow position: chr24:24810502-24810698 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 97-293
Cow position: chr24:25194249-25194438 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 44

Conread position: 97-294
Cow position: chr24:11028705-11028514 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 97-294
Cow position: chr24:12200425-12200235 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 186, 57

Conread position: 97-294
Cow position: chr24:13587008-13586818 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 56

Conread position: 97-294
Cow position: chr24:17689627-17689438 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 115, 55

Conread position: 97-294
Cow position: chr24:19465933-19465736 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 156, 55

Conread position: 98-292
Cow position: chr24:36286554-36286739 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 98-293
Cow position: chr24:18874836-18874648 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 98-293
Cow position: chr24:21519414-21519602 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 98-294
Cow position: chr24:39911049-39910858 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 7, 55

Conread position: 99-294
Cow position: chr24:44776191-44776001 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 100-292
Cow position: chr24:11119264-11119465 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 100-293
Cow position: chr24:4635181-4634993 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 100-294
Cow position: chr24:18750693-18750883 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 54

Conread position: 101-294
Cow position: chr24:29586988-29587173 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 108-290
Cow position: chr24:18405286-18405110 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 108-293
Cow position: chr24:27906433-27906610 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 108-294
Cow position: chr24:18810826-18811005 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 108-294
Cow position: chr24:27149380-27149555 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 108-294
Cow position: chr24:36554703-36554528 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 112-282
Cow position: chr24:32230507-32230343 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 36

Conread position: 112-293
Cow position: chr24:25732857-25733040 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 112-294
Cow position: chr24:250539-250362 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 112-294
Cow position: chr24:15557343-15557171 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 112-294
Cow position: chr24:22419959-22420135 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 112-294
Cow position: chr24:37252156-37252330 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 77, 40

Conread position: 113-276
Cow position: chr24:17294197-17294040 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 113-288
Cow position: chr24:27270926-27271096 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 113-294
Cow position: chr24:36010420-36010599 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 35

Conread position: 114-274
Cow position: chr24:20734028-20734199 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 81

Conread position: 115-292
Cow position: chr24:19186939-19187103 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 116-293
Cow position: chr24:34006206-34006034 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 171, 37

Conread position: 118-293
Cow position: chr24:24091335-24091162 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 42

Conread position: 160-294
Cow position: chr24:43027185-43027051 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 110

Conread position: 165-284
Cow position: chr24:18817433-18817552 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 165-285
Cow position: chr24:27040094-27040214 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 165-293
Cow position: chr24:12120943-12121071 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 165-293
Cow position: chr24:18702445-18702572 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 165-293
Cow position: chr24:25947815-25947687 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 165-293
Cow position: chr24:35210101-35210230 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 165-294
Cow position: chr24:3193226-3193098 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 80

Conread position: 165-294
Cow position: chr24:27323600-27323724 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 165-294
Cow position: chr24:39488391-39488521 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 166-294
Cow position: chr24:7917334-7917206 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 167-292
Cow position: chr24:12241767-12241892 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 176-285
Cow position: chr24:38428055-38427946 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 176-293
Cow position: chr24:38693821-38693705 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 101
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 179-277
Cow position: chr24:29505115-29505017 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.