Cow genome map
| Conread name: | OvF6-UMC-p6mm3-003-h04 |
| Conread position: | 61-292 |
| Cow position: | chr26:25225745-25225518 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 82-294 |
| Cow position: | chr26:829815-830027 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 151, 69 |
| Conread position: | 84-293 |
| Cow position: | chr26:32981462-32981258 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 85-293 |
| Cow position: | chr26:586866-586660 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 58 |
| Conread position: | 85-294 |
| Cow position: | chr26:4363313-4363513 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 85-294 |
| Cow position: | chr26:9099519-9099320 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 90-292 |
| Cow position: | chr26:3706810-3707011 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 123, 60 |
| Conread position: | 90-293 |
| Cow position: | chr26:4854563-4854756 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 90-293 |
| Cow position: | chr26:5406997-5407192 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 90-293 |
| Cow position: | chr26:16550002-16550200 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 93-292 |
| Cow position: | chr26:19671499-19671689 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 93-293 |
| Cow position: | chr26:19145921-19146116 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 116, 28 |
| Conread position: | 94-277 |
| Cow position: | chr26:22348990-22348814 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 94-284 |
| Cow position: | chr26:32601372-32601559 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 111, 59 |
| Conread position: | 94-291 |
| Cow position: | chr26:20291670-20291482 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 94-292 |
| Cow position: | chr26:4585188-4585000 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 94-292 |
| Cow position: | chr26:6823181-6823371 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 94-292 |
| Cow position: | chr26:12893405-12893218 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 94-293 |
| Cow position: | chr26:6794167-6794359 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 54 |
| Conread position: | 94-293 |
| Cow position: | chr26:7148283-7148088 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 110, 60 |
| Conread position: | 94-293 |
| Cow position: | chr26:10764234-10764427 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 94-293 |
| Cow position: | chr26:17398598-17398788 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 94-293 |
| Cow position: | chr26:28202737-28202543 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 94-293 |
| Cow position: | chr26:32830103-32830296 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 94-293 |
| Cow position: | chr26:33253294-33253104 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 94-293 |
| Cow position: | chr26:34060355-34060548 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 94-293 |
| Cow position: | chr26:34114284-34114477 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 94-294 |
| Cow position: | chr26:2930233-2930040 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 115, 28 |
| Conread position: | 94-294 |
| Cow position: | chr26:4807580-4807771 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 96-293 |
| Cow position: | chr26:33038199-33038013 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 97-261 |
| Cow position: | chr26:31903192-31903350 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 97-284 |
| Cow position: | chr26:23671441-23671622 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 97-286 |
| Cow position: | chr26:29664134-29663948 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 97-289 |
| Cow position: | chr26:11538557-11538744 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 149, 56 |
| Conread position: | 97-291 |
| Cow position: | chr26:12028212-12028024 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 97-291 |
| Cow position: | chr26:23624019-23623833 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 97-291 |
| Cow position: | chr26:33074472-33074286 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 97-292 |
| Cow position: | chr26:8811152-8811342 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 97-293 |
| Cow position: | chr26:27768292-27768480 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 98-293 |
| Cow position: | chr26:6714276-6714086 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 54 |
| Conread position: | 98-293 |
| Cow position: | chr26:11672323-11672513 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 98-294 |
| Cow position: | chr26:4167327-4167136 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 115, 51 |
| Conread position: | 98-294 |
| Cow position: | chr26:33475717-33475913 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 63 |
| Conread position: | 99-290 |
| Cow position: | chr26:25526276-25526456 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 100-284 |
| Cow position: | chr26:9501740-9501913 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 100-285 |
| Cow position: | chr26:28243857-28244036 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 100-293 |
| Cow position: | chr26:8811500-8811687 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 105-292 |
| Cow position: | chr26:34560138-34559960 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 52 |
| Conread position: | 108-293 |
| Cow position: | chr26:31633764-31633944 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 112-281 |
| Cow position: | chr26:26245130-26244968 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 112-292 |
| Cow position: | chr26:23481211-23481040 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 112-294 |
| Cow position: | chr26:21823005-21822834 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 112-294 |
| Cow position: | chr26:32688584-32688767 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 115-294 |
| Cow position: | chr26:27482523-27482349 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 116-286 |
| Cow position: | chr26:16801024-16801191 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 118-294 |
| Cow position: | chr26:16166649-16166480 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 124-294 |
| Cow position: | chr26:31712016-31711851 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 144-285 |
| Cow position: | chr26:2701920-2701780 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 160-293 |
| Cow position: | chr26:23097111-23096980 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 165-293 |
| Cow position: | chr26:1041087-1041215 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-293 |
| Cow position: | chr26:25029621-25029749 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-293 |
| Cow position: | chr26:35677929-35678061 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 165-294 |
| Cow position: | chr26:28743-28620 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 165-294 |
| Cow position: | chr26:1894292-1894168 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 165-294 |
| Cow position: | chr26:9662144-9662015 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-294 |
| Cow position: | chr26:21291705-21291573 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 14 |
| Conread position: | 165-294 |
| Cow position: | chr26:31173357-31173486 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-294 |
| Cow position: | chr26:33728556-33728426 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 165-294 |
| Cow position: | chr26:34026949-34026820 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-294 |
| Cow position: | chr26:35530334-35530462 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 167-284 |
| Cow position: | chr26:10740162-10740041 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 176-293 |
| Cow position: | chr26:16423691-16423806 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 177-294 |
| Cow position: | chr26:26919633-26919750 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-291 |
| Cow position: | chr26:15908662-15908550 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-293 |
| Cow position: | chr26:6741640-6741534 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.