Cow genome map

Conread name: OvF6-UMC-p6mm3-003-h04

Conread position: 80-285
Cow position: chr29:31489307-31489511 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 75

Conread position: 83-285
Cow position: chr29:18878491-18878295 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 72

Conread position: 85-294
Cow position: chr29:1933577-1933374 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 89-292
Cow position: chr29:8634652-8634846 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 89-293
Cow position: chr29:14576857-14577052 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 90-293
Cow position: chr29:20167423-20167618 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 62

Conread position: 90-293
Cow position: chr29:35084223-35084028 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 90-294
Cow position: chr29:16609747-16609946 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 90-294
Cow position: chr29:37618304-37618504 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 30, 73

Conread position: 90-294
Cow position: chr29:42630120-42630313 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 93-293
Cow position: chr29:18450136-18449943 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 94-237
Cow position: chr29:13867207-13867070 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 94-282
Cow position: chr29:24365893-24365713 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 94-291
Cow position: chr29:19420610-19420427 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 57

Conread position: 94-292
Cow position: chr29:16278991-16279171 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 94-292
Cow position: chr29:31928992-31929180 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 94-292
Cow position: chr29:31934382-31934570 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 94-292
Cow position: chr29:43088314-43088500 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 94-293
Cow position: chr29:4441202-4441010 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 67

Conread position: 94-293
Cow position: chr29:5409138-5408947 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 94-293
Cow position: chr29:5953856-5953661 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 146, 60

Conread position: 94-293
Cow position: chr29:19187029-19187221 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 94-293
Cow position: chr29:21196646-21196457 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 94-293
Cow position: chr29:24188062-24187868 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 94-293
Cow position: chr29:33321354-33321544 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 94-294
Cow position: chr29:41530853-41531047 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 95-292
Cow position: chr29:26539239-26539425 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 95-294
Cow position: chr29:32656088-32655898 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 95-294
Cow position: chr29:35677539-35677345 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 66, 45

Conread position: 97-264
Cow position: chr29:21443332-21443170 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 97-266
Cow position: chr29:24051375-24051210 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 135, 56

Conread position: 97-274
Cow position: chr29:40633649-40633829 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 82

Conread position: 97-280
Cow position: chr29:44684105-44684279 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 97-282
Cow position: chr29:36632854-36632676 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 43

Conread position: 97-284
Cow position: chr29:26017496-26017314 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 97-285
Cow position: chr29:17436757-17436934 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 97-290
Cow position: chr29:501203-501393 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 118, 56

Conread position: 97-290
Cow position: chr29:32656439-32656628 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 57

Conread position: 97-291
Cow position: chr29:7955984-7955795 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 55

Conread position: 97-293
Cow position: chr29:685167-684982 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 97-293
Cow position: chr29:2056067-2056255 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 167, 55

Conread position: 97-293
Cow position: chr29:5046659-5046848 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 55

Conread position: 97-293
Cow position: chr29:17297142-17297333 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 0

Conread position: 97-293
Cow position: chr29:28420762-28420952 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 97-293
Cow position: chr29:35258991-35259176 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 97-294
Cow position: chr29:3292954-3293139 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 97-294
Cow position: chr29:14375875-14375683 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 97-294
Cow position: chr29:16290732-16290919 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 57

Conread position: 97-294
Cow position: chr29:26211058-26211249 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 97-294
Cow position: chr29:30440940-30441135 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 58

Conread position: 97-294
Cow position: chr29:34297562-34297375 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 97-294
Cow position: chr29:36220540-36220739 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 112, 54

Conread position: 97-294
Cow position: chr29:38754933-38754742 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 98-273
Cow position: chr29:29974008-29973838 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 98-293
Cow position: chr29:5520478-5520289 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 98-293
Cow position: chr29:8163822-8163632 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 98-293
Cow position: chr29:23142327-23142137 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 15

Conread position: 98-294
Cow position: chr29:23874467-23874658 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 99-293
Cow position: chr29:4120862-4121051 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 99-293
Cow position: chr29:16200470-16200281 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 99-294
Cow position: chr29:28087678-28087870 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 0

Conread position: 101-284
Cow position: chr29:34359811-34359640 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 103-287
Cow position: chr29:27042288-27042460 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 116, 18

Conread position: 107-294
Cow position: chr29:7954953-7954768 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 15

Conread position: 110-294
Cow position: chr29:35189626-35189805 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 112-277
Cow position: chr29:38581989-38582149 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 112-293
Cow position: chr29:16735245-16735421 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 112-293
Cow position: chr29:23819369-23819189 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 40

Conread position: 112-294
Cow position: chr29:11894719-11894896 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 112-294
Cow position: chr29:14746801-14746974 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 112-294
Cow position: chr29:15947188-15947365 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 112-294
Cow position: chr29:22577158-22576982 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 114-292
Cow position: chr29:31092472-31092643 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 114-294
Cow position: chr29:27911614-27911788 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 114-294
Cow position: chr29:27926797-27926970 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 39

Conread position: 115-293
Cow position: chr29:42404971-42405144 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 117-292
Cow position: chr29:11081370-11081200 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 18

Conread position: 149-294
Cow position: chr29:16164384-16164239 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 10, 141

Conread position: 158-293
Cow position: chr29:7040810-7040673 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 160-291
Cow position: chr29:36357190-36357321 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 33

Conread position: 164-293
Cow position: chr29:30227214-30227085 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 165-290
Cow position: chr29:34483559-34483433 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 165-293
Cow position: chr29:8841376-8841254 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 165-293
Cow position: chr29:20643984-20644112 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 109

Conread position: 165-294
Cow position: chr29:3711443-3711572 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 165-294
Cow position: chr29:11685236-11685365 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 165-294
Cow position: chr29:24119431-24119302 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 165-294
Cow position: chr29:38732222-38732351 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 166-293
Cow position: chr29:14828158-14828034 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 166-294
Cow position: chr29:30294803-30294675 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 167-294
Cow position: chr29:26777079-26777206 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 167-294
Cow position: chr29:35458701-35458573 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 169-293
Cow position: chr29:774061-774185 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 169-294
Cow position: chr29:34744556-34744434 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 80

Conread position: 171-293
Cow position: chr29:31835347-31835463 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 176-284
Cow position: chr29:35663839-35663730 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 176-293
Cow position: chr29:4741311-4741194 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 176-293
Cow position: chr29:6716434-6716317 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 176-294
Cow position: chr29:44937919-44937799 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.