Cow genome map

Conread name: OvF6-UMC-p6mm3-006-a01

Conread position: 1-187
Cow position: chr18:43048642-43048456 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 127
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-212
Cow position: chr18:56316135-56316346 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-269
Cow position: chr18:52428727-52428996 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 172
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 205, 228

Conread position: 1-281
Cow position: chr18:51789051-51788770 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 177
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 206, 201

Conread position: 1-281
Cow position: chr18:51812294-51812013 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 134

Conread position: 1-284
Cow position: chr18:51400786-51401070 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 184
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 127, 134

Conread position: 1-284
Cow position: chr18:52448034-52448319 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 131

Conread position: 1-290
Cow position: chr18:41948842-41948552 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 127

Conread position: 1-290
Cow position: chr18:42792142-42792432 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 256, 0

Conread position: 1-290
Cow position: chr18:42792394-42792684 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 181
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 256, 0

Conread position: 1-290
Cow position: chr18:51766080-51765790 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 178
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 256, 0

Conread position: 1-290
Cow position: chr18:52427971-52428261 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 139, 128

Conread position: 1-290
Cow position: chr18:52428055-52428345 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 48

Conread position: 1-290
Cow position: chr18:52428223-52428513 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 184
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 139, 128

Conread position: 1-290
Cow position: chr18:52428391-52428681 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 182
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 256, 0

Conread position: 1-290
Cow position: chr18:52428559-52428849 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 180
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 256, 0

Conread position: 1-290
Cow position: chr18:52433152-52433442 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 134

Conread position: 1-290
Cow position: chr18:52433320-52433610 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 223, 216

Conread position: 1-290
Cow position: chr18:52433404-52433694 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 185
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 128

Conread position: 1-290
Cow position: chr18:52433488-52433778 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 187
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 55, 49

Conread position: 1-290
Cow position: chr18:52433572-52433862 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 180
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 256, 0

Conread position: 1-290
Cow position: chr18:52433740-52434030 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 179
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 256, 0

Conread position: 1-290
Cow position: chr18:56329345-56329055 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 214, 241

Conread position: 1-293
Cow position: chr18:52433908-52434201 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 104, 110

Conread position: 1-297
Cow position: chr18:52428139-52428436 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 186
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 223, 216

Conread position: 1-298
Cow position: chr18:33093020-33092722 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 135, 129

Conread position: 1-323
Cow position: chr18:42675235-42674911 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 207
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 141, 128

Conread position: 1-326
Cow position: chr18:33064096-33063769 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 208
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 134

Conread position: 1-354
Cow position: chr18:56329261-56328907 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 229
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 220, 228

Conread position: 1-360
Cow position: chr18:33064852-33064493 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 139, 130

Conread position: 1-397
Cow position: chr18:52447278-52447671 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 252
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 83, 94

Conread position: 2-178
Cow position: chr18:40324125-40323949 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-247
Cow position: chr18:42984717-42984472 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 134, 126

Conread position: 2-264
Cow position: chr18:44397764-44397503 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 140, 128

Conread position: 2-280
Cow position: chr18:51752164-51751885 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 183
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 43, 64

Conread position: 2-281
Cow position: chr18:49032371-49032091 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 137

Conread position: 2-282
Cow position: chr18:14453285-14453004 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 30

Conread position: 2-284
Cow position: chr18:42675066-42674783 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 258, 0

Conread position: 2-284
Cow position: chr18:42827407-42827690 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 177
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 131, 124

Conread position: 2-284
Cow position: chr18:42960212-42959929 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 48

Conread position: 2-284
Cow position: chr18:42984801-42984518 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 179
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 131, 126

Conread position: 2-284
Cow position: chr18:51368179-51367896 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 181
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 124, 129

Conread position: 2-284
Cow position: chr18:51789554-51789271 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 179
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 124, 137

Conread position: 2-284
Cow position: chr18:51839222-51838939 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 126, 139

Conread position: 2-287
Cow position: chr18:49032455-49032169 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 132

Conread position: 2-289
Cow position: chr18:43048725-43048437 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 204, 195

Conread position: 2-290
Cow position: chr18:41197578-41197867 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 39, 30

Conread position: 2-290
Cow position: chr18:41198166-41198454 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 131

Conread position: 2-290
Cow position: chr18:41198250-41198539 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 182
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 126, 131

Conread position: 2-290
Cow position: chr18:41949009-41948720 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 137

Conread position: 2-290
Cow position: chr18:42791891-42792180 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 255, 0

Conread position: 2-290
Cow position: chr18:42837429-42837140 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 182
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 126, 132

Conread position: 2-290
Cow position: chr18:44154364-44154075 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 183
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 136, 127

Conread position: 2-290
Cow position: chr18:44398268-44397979 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 183
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 255, 0

Conread position: 2-290
Cow position: chr18:49022817-49023106 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 187
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 56

Conread position: 2-290
Cow position: chr18:49032623-49032334 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 255, 0

Conread position: 2-290
Cow position: chr18:49033127-49032838 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 184
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 116

Conread position: 2-290
Cow position: chr18:51400703-51400992 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 184
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 205, 200

Conread position: 2-290
Cow position: chr18:51812461-51812172 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 183
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 126, 133

Conread position: 2-290
Cow position: chr18:51812881-51812592 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 187
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 47

Conread position: 2-295
Cow position: chr18:51400871-51401166 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 125, 130

Conread position: 2-298
Cow position: chr18:51400535-51400833 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 205, 200

Conread position: 2-321
Cow position: chr18:51812797-51812476 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 133

Conread position: 2-322
Cow position: chr18:44240348-44240670 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 197
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 252, 0

Conread position: 2-323
Cow position: chr18:33064683-33064360 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 200
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 58

Conread position: 2-323
Cow position: chr18:52447867-52448190 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 126, 131

Conread position: 2-340
Cow position: chr18:56329428-56329087 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 211
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 126, 131

Conread position: 2-353
Cow position: chr18:40324797-40324445 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 221
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 131, 127

Conread position: 2-353
Cow position: chr18:43022480-43022128 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 221
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 255, 330

Conread position: 2-353
Cow position: chr18:44398184-44397832 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 216
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 255, 343

Conread position: 2-354
Cow position: chr18:42675150-42674797 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 226
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 132, 126

Conread position: 2-354
Cow position: chr18:55066855-55066502 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 215
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 131

Conread position: 2-360
Cow position: chr18:33064515-33064157 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 226, 195

Conread position: 2-360
Cow position: chr18:43175185-43174827 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 255, 343

Conread position: 2-362
Cow position: chr18:42675318-42674957 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 226
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 126

Conread position: 2-390
Cow position: chr18:52447951-52448337 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 246
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 255, 355

Conread position: 2-392
Cow position: chr18:41197914-41198301 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 247
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 129

Conread position: 2-392
Cow position: chr18:51368011-51367625 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 240
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 226, 200

Conread position: 2-397
Cow position: chr18:42744294-42743902 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 252
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 255, 325

Conread position: 2-397
Cow position: chr18:43093415-43093023 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 240
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 213, 221

Conread position: 2-397
Cow position: chr18:44398100-44397708 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 249
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 134, 127

Conread position: 2-397
Cow position: chr18:52447531-52447923 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 251
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 255, 301

Conread position: 2-397
Cow position: chr18:52447615-52448007 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 251
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 255, 343

Conread position: 2-397
Cow position: chr18:52447783-52448175 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 247
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 255, 343

Conread position: 2-398
Cow position: chr18:44398016-44397623 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 252
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 126, 133

Conread position: 2-398
Cow position: chr18:51368431-51368039 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 240
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 255, 343

Conread position: 2-398
Cow position: chr18:52447447-52447840 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 249
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 126, 130

Conread position: 3-175
Cow position: chr18:43119815-43119643 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 125, 132

Conread position: 3-284
Cow position: chr18:51368514-51368232 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 254, 0

Conread position: 3-362
Cow position: chr18:43093498-43093138 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 222
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 125, 132

Conread position: 3-397
Cow position: chr18:52447364-52447755 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 247
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 260, 324

Conread position: 16-284
Cow position: chr18:51752234-51751965 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 189, 213

Conread position: 16-290
Cow position: chr18:51969358-51969631 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 119

Conread position: 16-292
Cow position: chr18:42674716-42674438 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 182
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 29

Conread position: 16-360
Cow position: chr18:33093089-33092745 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 222
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 111, 117

Conread position: 16-398
Cow position: chr18:44398422-44398043 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 238, 329

Conread position: 17-290
Cow position: chr18:51400298-51400572 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 118

Conread position: 17-290
Cow position: chr18:56494030-56494304 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 170
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 240, 0

Conread position: 17-362
Cow position: chr18:40075041-40075387 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 214
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 248, 310

Conread position: 21-362
Cow position: chr18:53586389-53586047 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 212
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 108, 114

Conread position: 22-354
Cow position: chr18:53559697-53560030 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 207
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 22

Conread position: 24-284
Cow position: chr18:56247788-56247527 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 233, 0

Conread position: 58-354
Cow position: chr18:44398464-44398167 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 25

Show alignments to all cow chromosomes.