Cow genome map
| Conread name: | OvF8-UMC-p8mm4-010-g11 |
| Conread position: | 1-190 |
| Cow position: | chr1:84314231-84314418 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 1-192 |
| Cow position: | chr1:84793437-84793628 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-243 |
| Cow position: | chr1:4448973-4448727 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 113 |
| Conread position: | 1-243 |
| Cow position: | chr1:27972781-27972534 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 1-253 |
| Cow position: | chr1:67395760-67395513 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-274 |
| Cow position: | chr1:10574687-10574959 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 1-274 |
| Cow position: | chr1:36891288-36891567 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 1-274 |
| Cow position: | chr1:86406757-86406486 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-275 |
| Cow position: | chr1:73085814-73086087 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 1-359 |
| Cow position: | chr1:66189418-66189787 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-361 |
| Cow position: | chr1:11059511-11059893 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 1-363 |
| Cow position: | chr1:14765570-14765939 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 1-364 |
| Cow position: | chr1:57533510-57533132 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-365 |
| Cow position: | chr1:4309684-4309313 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 1-365 |
| Cow position: | chr1:6482400-6482771 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 1-365 |
| Cow position: | chr1:8015749-8016105 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 1-365 |
| Cow position: | chr1:45987898-45988264 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-365 |
| Cow position: | chr1:72665920-72666275 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 1-365 |
| Cow position: | chr1:82405848-82405502 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 139, 34 |
| Conread position: | 1-365 |
| Cow position: | chr1:89518272-89517896 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 2-260 |
| Cow position: | chr1:79171015-79171272 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 105 |
| Conread position: | 2-276 |
| Cow position: | chr1:91669094-91668825 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 2-318 |
| Cow position: | chr1:17654285-17654610 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 18 |
| Conread position: | 2-365 |
| Cow position: | chr1:93222160-93222530 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 33 |
| Conread position: | 2-365 |
| Cow position: | chr1:93736632-93736251 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 3-158 |
| Cow position: | chr1:21322044-21321895 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 3-262 |
| Cow position: | chr1:60502979-60503235 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 23, 104 |
| Conread position: | 5-260 |
| Cow position: | chr1:91852410-91852662 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 108 |
| Conread position: | 6-365 |
| Cow position: | chr1:81152665-81153028 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 7-268 |
| Cow position: | chr1:40204143-40203885 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 101 |
| Conread position: | 8-229 |
| Cow position: | chr1:95316778-95316985 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 52-367 |
| Cow position: | chr1:8942605-8942925 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 54-260 |
| Cow position: | chr1:78054771-78054568 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 88, 47 |
| Conread position: | 112-274 |
| Cow position: | chr1:7969387-7969229 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 145-274 |
| Cow position: | chr1:84794106-84794235 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 111 |
Show alignments to all cow chromosomes.