Cow genome map
| Conread name: | OvF8-UMC-p8mm4-010-g11 |
| Conread position: | 1-208 |
| Cow position: | chr12:4309350-4309144 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 169 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 1-251 |
| Cow position: | chr12:43617452-43617696 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 1-253 |
| Cow position: | chr12:25434028-25434273 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-257 |
| Cow position: | chr12:2470142-2470390 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 141, 32 |
| Conread position: | 1-363 |
| Cow position: | chr12:45178368-45178739 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 269 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 1-364 |
| Cow position: | chr12:44476942-44477309 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-365 |
| Cow position: | chr12:3588430-3588061 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 1-365 |
| Cow position: | chr12:6268488-6268121 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 1-365 |
| Cow position: | chr12:8125885-8125516 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 23 |
| Conread position: | 1-365 |
| Cow position: | chr12:10787530-10787881 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 113 |
| Conread position: | 1-365 |
| Cow position: | chr12:12025439-12025813 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-365 |
| Cow position: | chr12:27729803-27730180 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 1-365 |
| Cow position: | chr12:27902572-27902200 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 31 |
| Conread position: | 1-365 |
| Cow position: | chr12:34544258-34544597 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 2-233 |
| Cow position: | chr12:18708888-18708669 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 2-274 |
| Cow position: | chr12:10354011-10353736 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 109 |
| Conread position: | 2-365 |
| Cow position: | chr12:6068865-6069241 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 56 |
| Conread position: | 3-360 |
| Cow position: | chr12:33561721-33562072 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 6-274 |
| Cow position: | chr12:15743378-15743635 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 7-358 |
| Cow position: | chr12:16913581-16913227 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 16 |
| Conread position: | 44-263 |
| Cow position: | chr12:39640297-39640514 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 72-365 |
| Cow position: | chr12:30271626-30271921 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 74-365 |
| Cow position: | chr12:42115549-42115819 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 112-365 |
| Cow position: | chr12:11935076-11935334 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 112-365 |
| Cow position: | chr12:39351128-39351379 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 144-350 |
| Cow position: | chr12:37824954-37825171 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 56 |
Show alignments to all cow chromosomes.