Cow genome map
| Conread name: | OvF8-UMC-p8mm4-010-g11 |
| Conread position: | 1-189 |
| Cow position: | chr13:12766006-12765819 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 25, 108 |
| Conread position: | 1-230 |
| Cow position: | chr13:52442238-52442014 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 1-234 |
| Cow position: | chr13:26182888-26182658 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 142 |
| Conread position: | 1-263 |
| Cow position: | chr13:58157889-58157630 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-265 |
| Cow position: | chr13:42125479-42125224 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-266 |
| Cow position: | chr13:17170182-17170444 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 1-274 |
| Cow position: | chr13:15702697-15702439 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 1-281 |
| Cow position: | chr13:27108737-27109015 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 1-291 |
| Cow position: | chr13:54779156-54778867 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 1-324 |
| Cow position: | chr13:10798644-10798967 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 1-363 |
| Cow position: | chr13:12319620-12319989 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-365 |
| Cow position: | chr13:1234449-1234065 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-365 |
| Cow position: | chr13:1421594-1421224 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 1-365 |
| Cow position: | chr13:22071030-22070671 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 2-178 |
| Cow position: | chr13:2335959-2335784 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 2-185 |
| Cow position: | chr13:17882114-17881923 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 2-267 |
| Cow position: | chr13:20704667-20704940 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 90 |
| Conread position: | 2-365 |
| Cow position: | chr13:49536927-49536561 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 3-318 |
| Cow position: | chr13:18318150-18318461 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 139, 21 |
| Conread position: | 3-365 |
| Cow position: | chr13:822763-822393 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 7-219 |
| Cow position: | chr13:32715885-32716090 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 56-365 |
| Cow position: | chr13:12771306-12770984 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 65-365 |
| Cow position: | chr13:13760111-13759800 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 41 |
| Conread position: | 74-365 |
| Cow position: | chr13:25813153-25813445 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 76-238 |
| Cow position: | chr13:18201255-18201095 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 144 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 121-365 |
| Cow position: | chr13:36700965-36701220 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 139-261 |
| Cow position: | chr13:61823136-61823258 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 139-365 |
| Cow position: | chr13:28649253-28649015 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 140-253 |
| Cow position: | chr13:54325555-54325440 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 60 |
| Conread position: | 159-365 |
| Cow position: | chr13:12765516-12765307 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 10, 183 |
Show alignments to all cow chromosomes.