Cow genome map
| Conread name: | OvF8-UMC-p8mm4-010-g11 |
| Conread position: | 1-154 |
| Cow position: | chr16:16436063-16435916 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-206 |
| Cow position: | chr16:6087435-6087231 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-217 |
| Cow position: | chr16:6083857-6083642 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-238 |
| Cow position: | chr16:33986266-33986029 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 38, 112 |
| Conread position: | 1-253 |
| Cow position: | chr16:17756497-17756741 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 141, 34 |
| Conread position: | 1-265 |
| Cow position: | chr16:19031034-19030780 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 136, 34 |
| Conread position: | 1-274 |
| Cow position: | chr16:12525763-12525493 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 1-306 |
| Cow position: | chr16:43164955-43165245 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 1-360 |
| Cow position: | chr16:20497240-20496873 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 1-363 |
| Cow position: | chr16:3929889-3930246 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 1-363 |
| Cow position: | chr16:34760626-34760241 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 1-365 |
| Cow position: | chr16:9569764-9570146 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-365 |
| Cow position: | chr16:16429921-16429548 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 1-365 |
| Cow position: | chr16:26791175-26791561 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 1-365 |
| Cow position: | chr16:30680691-30680315 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 1-365 |
| Cow position: | chr16:39220138-39220493 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-365 |
| Cow position: | chr16:41581490-41581835 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 1-367 |
| Cow position: | chr16:56872198-56871829 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 3-367 |
| Cow position: | chr16:47056753-47056389 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 4-365 |
| Cow position: | chr16:13469188-13468808 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 110 |
| Conread position: | 37-364 |
| Cow position: | chr16:32034467-32034141 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 74 |
| Conread position: | 112-274 |
| Cow position: | chr16:42047164-42047325 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 112-363 |
| Cow position: | chr16:35509948-35510218 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 142-321 |
| Cow position: | chr16:25612756-25612941 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 143-365 |
| Cow position: | chr16:16435594-16435367 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 143-365 |
| Cow position: | chr16:23783295-23783519 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 163-365 |
| Cow position: | chr16:25616593-25616810 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 111, 35 |
| Conread position: | 200-365 |
| Cow position: | chr16:6087199-6087025 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 19 |
Show alignments to all cow chromosomes.