Cow genome map
| Conread name: | OvF8-UMC-p8mm4-010-g11 |
| Conread position: | 1-241 |
| Cow position: | chr27:31551256-31551029 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 159, 34 |
| Conread position: | 1-242 |
| Cow position: | chr27:6029759-6029993 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 134, 36 |
| Conread position: | 1-243 |
| Cow position: | chr27:29836989-29837249 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 181 |
| Conread position: | 1-260 |
| Cow position: | chr27:22335084-22335331 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 1-263 |
| Cow position: | chr27:6343435-6343178 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 1-272 |
| Cow position: | chr27:16477377-16477639 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 1-274 |
| Cow position: | chr27:22121464-22121194 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-362 |
| Cow position: | chr27:25503319-25502952 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 16 |
| Conread position: | 1-365 |
| Cow position: | chr27:13654183-13654569 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 143, 35 |
| Conread position: | 1-365 |
| Cow position: | chr27:18497892-18497517 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 1-365 |
| Cow position: | chr27:20831991-20831619 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 1-368 |
| Cow position: | chr27:6915818-6915450 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 2-154 |
| Cow position: | chr27:5169237-5169387 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 21, 105 |
| Conread position: | 2-158 |
| Cow position: | chr27:28150817-28150663 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 2-307 |
| Cow position: | chr27:28002324-28002638 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 112 |
| Conread position: | 2-365 |
| Cow position: | chr27:5416921-5417272 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 2-365 |
| Cow position: | chr27:15471663-15471288 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 3-274 |
| Cow position: | chr27:7134220-7134484 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 5-274 |
| Cow position: | chr27:25342346-25342610 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 5-365 |
| Cow position: | chr27:29939991-29940351 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 6-365 |
| Cow position: | chr27:30357069-30357425 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 100 |
| Conread position: | 11-156 |
| Cow position: | chr27:18736795-18736937 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 16-365 |
| Cow position: | chr27:15454989-15454645 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 64-208 |
| Cow position: | chr27:26593943-26593800 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 112-359 |
| Cow position: | chr27:9519406-9519657 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 30, 129 |
| Conread position: | 121-365 |
| Cow position: | chr27:24330657-24330401 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 145-365 |
| Cow position: | chr27:5169805-5170040 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 168-365 |
| Cow position: | chr27:24752751-24752959 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 156 |
Show alignments to all cow chromosomes.