Cow genome map
| Conread name: | OvF8-UMC-p8mm4-010-g11 |
| Conread position: | 1-251 |
| Cow position: | chr3:33158790-33158546 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 141, 21 |
| Conread position: | 1-252 |
| Cow position: | chr3:24503429-24503190 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 1-252 |
| Cow position: | chr3:67824232-67823987 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 139, 34 |
| Conread position: | 1-260 |
| Cow position: | chr3:48566074-48566331 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 1-266 |
| Cow position: | chr3:81368202-81367937 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 1-269 |
| Cow position: | chr3:6950150-6949888 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 32 |
| Conread position: | 1-274 |
| Cow position: | chr3:81576862-81577133 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 1-312 |
| Cow position: | chr3:16174974-16175286 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 1-323 |
| Cow position: | chr3:24156396-24156073 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 1-360 |
| Cow position: | chr3:23034932-23034574 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 6 |
| Conread position: | 1-362 |
| Cow position: | chr3:13636488-13636110 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 1-363 |
| Cow position: | chr3:30245875-30246241 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-364 |
| Cow position: | chr3:14578368-14578743 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 1-364 |
| Cow position: | chr3:54325391-54324995 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 286 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 1-365 |
| Cow position: | chr3:5640920-5641286 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 34 |
| Conread position: | 1-365 |
| Cow position: | chr3:60494794-60495170 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 270 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 143, 34 |
| Conread position: | 2-157 |
| Cow position: | chr3:38705622-38705772 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 2-266 |
| Cow position: | chr3:2119445-2119697 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 2-274 |
| Cow position: | chr3:77014997-77014727 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 2-360 |
| Cow position: | chr3:2085726-2086104 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 2-364 |
| Cow position: | chr3:32185599-32185955 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 3-243 |
| Cow position: | chr3:23654458-23654692 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 137, 30 |
| Conread position: | 3-356 |
| Cow position: | chr3:44569776-44570129 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 7-186 |
| Cow position: | chr3:70485697-70485873 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 28 |
| Conread position: | 7-267 |
| Cow position: | chr3:62569547-62569806 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 37-274 |
| Cow position: | chr3:68874728-68874963 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 105, 64 |
| Conread position: | 44-365 |
| Cow position: | chr3:34749969-34750297 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 53-307 |
| Cow position: | chr3:33682775-33683019 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 89, 53 |
| Conread position: | 92-268 |
| Cow position: | chr3:84148806-84148631 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 20 |
Show alignments to all cow chromosomes.