Cow genome map
| Conread name: | OvF8-UMC-p8mm4-010-g11 |
| Conread position: | 1-158 |
| Cow position: | chr6:49099458-49099608 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-208 |
| Cow position: | chr6:19710930-19711127 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-222 |
| Cow position: | chr6:29690250-29690036 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 1-238 |
| Cow position: | chr6:47169806-47170046 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 1-262 |
| Cow position: | chr6:25627688-25627956 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 127 |
| Conread position: | 1-274 |
| Cow position: | chr6:61431700-61431433 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 1-356 |
| Cow position: | chr6:47159384-47159034 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 141, 32 |
| Conread position: | 1-365 |
| Cow position: | chr6:6786710-6787082 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 21 |
| Conread position: | 1-365 |
| Cow position: | chr6:26125153-26124788 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 1-365 |
| Cow position: | chr6:32521502-32521144 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 101 |
| Conread position: | 1-365 |
| Cow position: | chr6:50825462-50825811 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 262 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 25, 114 |
| Conread position: | 1-365 |
| Cow position: | chr6:54084427-54084796 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 34 |
| Conread position: | 1-365 |
| Cow position: | chr6:61211775-61212148 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 1-365 |
| Cow position: | chr6:68020225-68019860 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 2-260 |
| Cow position: | chr6:55461840-55462095 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 2-363 |
| Cow position: | chr6:39743867-39744235 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 33 |
| Conread position: | 3-365 |
| Cow position: | chr6:30021465-30021830 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 10 |
| Conread position: | 3-365 |
| Cow position: | chr6:65305706-65305341 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 6-149 |
| Cow position: | chr6:53570160-53570018 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 7-251 |
| Cow position: | chr6:60373660-60373419 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 7-274 |
| Cow position: | chr6:63238315-63238049 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 16, 91 |
| Conread position: | 8-365 |
| Cow position: | chr6:49414315-49413959 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 88 |
| Conread position: | 12-268 |
| Cow position: | chr6:67424592-67424847 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 22-365 |
| Cow position: | chr6:49931905-49932251 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 78 |
| Conread position: | 37-260 |
| Cow position: | chr6:35714084-35713863 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 103, 69 |
| Conread position: | 50-363 |
| Cow position: | chr6:53148120-53147808 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 57 |
| Conread position: | 74-274 |
| Cow position: | chr6:56674893-56675095 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 141-364 |
| Cow position: | chr6:53569731-53569491 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 134, 25 |
| Conread position: | 196-365 |
| Cow position: | chr6:42098640-42098462 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 141 |
Show alignments to all cow chromosomes.