Cow genome map
| Conread name: | OvF8-UMC-p8mm4-010-g11 |
| Conread position: | 1-179 |
| Cow position: | chrX:9342495-9342321 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 139, 37 |
| Conread position: | 1-179 |
| Cow position: | chrX:34814024-34814198 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 139, 37 |
| Conread position: | 1-243 |
| Cow position: | chrX:26246332-26246567 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 141, 34 |
| Conread position: | 1-264 |
| Cow position: | chrX:39205707-39205450 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-265 |
| Cow position: | chrX:32018722-32018462 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-268 |
| Cow position: | chrX:41387497-41387767 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-274 |
| Cow position: | chrX:34804904-34805165 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 141, 32 |
| Conread position: | 1-274 |
| Cow position: | chrX:47296736-47296468 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 1-354 |
| Cow position: | chrX:7544748-7545112 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 1-356 |
| Cow position: | chrX:1181324-1180959 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 1-365 |
| Cow position: | chrX:25200857-25200479 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 2-274 |
| Cow position: | chrX:47777906-47777642 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 2-365 |
| Cow position: | chrX:47339872-47339509 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 3-154 |
| Cow position: | chrX:45000965-45001115 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 7-208 |
| Cow position: | chrX:15327874-15327668 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 107 |
| Conread position: | 38-368 |
| Cow position: | chrX:34817548-34817885 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 50-365 |
| Cow position: | chrX:25190809-25191138 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 74-365 |
| Cow position: | chrX:47119313-47119018 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 114-269 |
| Cow position: | chrX:45632726-45632877 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 142-274 |
| Cow position: | chrX:45470133-45470000 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 57 |
| Conread position: | 145-365 |
| Cow position: | chrX:45928281-45928512 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 11, 55 |
Show alignments to all cow chromosomes.