Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-222
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 169

Conread position: 1-289
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 264

Conread position: 1-299
Cow position:
Alignm length: 305
Alignm identity: 205
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 48, 193

Conread position: 1-308
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 56

Conread position: 1-312
Cow position:
Alignm length: 335
Alignm identity: 223
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 79

Conread position: 1-394
Cow position:
Alignm length: 414
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 176

Conread position: 1-405
Cow position:
Alignm length: 418
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 310

Conread position: 1-418
Cow position:
Alignm length: 446
Alignm identity: 316
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 51, 143

Conread position: 1-426
Cow position:
Alignm length: 440
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 79

Conread position: 1-444
Cow position:
Alignm length: 457
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 55

Conread position: 1-549
Cow position:
Alignm length: 567
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 43

Conread position: 1-586
Cow position:
Alignm length: 602
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 1-590
Cow position:
Alignm length: 615
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 27

Conread position: 1-602
Cow position:
Alignm length: 635
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 198

Conread position: 1-602
Cow position:
Alignm length: 620
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 42

Conread position: 1-602
Cow position:
Alignm length: 619
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 50

Conread position: 1-603
Cow position:
Alignm length: 635
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 276

Conread position: 34-418
Cow position:
Alignm length: 398
Alignm identity: 260
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 30

Conread position: 43-377
Cow position:
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 37

Conread position: 43-434
Cow position:
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 43-601
Cow position:
Alignm length: 574
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 36

Conread position: 43-602
Cow position:
Alignm length: 563
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 36

Conread position: 43-602
Cow position:
Alignm length: 590
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 181

Conread position: 46-243
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 151, 33

Conread position: 46-265
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 34

Conread position: 49-373
Cow position:
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 62-308
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 10, 18

Conread position: 65-244
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 14

Conread position: 65-308
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 172, 14

Conread position: 65-320
Cow position:
Alignm length: 268
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 124, 14

Conread position: 65-430
Cow position:
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 14

Conread position: 65-602
Cow position:
Alignm length: 569
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 66-333
Cow position:
Alignm length: 279
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 135, 13

Conread position: 68-389
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 185

Conread position: 68-559
Cow position:
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 57

Conread position: 78-353
Cow position:
Alignm length: 285
Alignm identity: 188
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 13

Conread position: 80-197
Cow position:
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 80-243
Cow position:
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 80-243
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 27

Conread position: 80-265
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 80-298
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 80-298
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 168, 102

Conread position: 80-315
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 39

Conread position: 80-320
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 237

Conread position: 80-333
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 144

Conread position: 80-361
Cow position:
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 80-365
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 100, 60

Conread position: 80-368
Cow position:
Alignm length: 294
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 158, 47

Conread position: 80-370
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 100, 185

Conread position: 80-390
Cow position:
Alignm length: 325
Alignm identity: 224
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 65, 70

Conread position: 80-393
Cow position:
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 40

Conread position: 80-407
Cow position:
Alignm length: 339
Alignm identity: 227
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 39

Conread position: 80-418
Cow position:
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 180

Conread position: 80-422
Cow position:
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 19

Conread position: 80-422
Cow position:
Alignm length: 347
Alignm identity: 236
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 165, 219

Conread position: 80-424
Cow position:
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 142

Conread position: 80-428
Cow position:
Alignm length: 351
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 108, 128

Conread position: 80-428
Cow position:
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 235

Conread position: 80-428
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 163

Conread position: 80-428
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 102, 251

Conread position: 80-434
Cow position:
Alignm length: 366
Alignm identity: 255
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 45, 39

Conread position: 80-453
Cow position:
Alignm length: 384
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 191

Conread position: 80-466
Cow position:
Alignm length: 396
Alignm identity: 267
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 102, 164

Conread position: 80-477
Cow position:
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 40

Conread position: 80-504
Cow position:
Alignm length: 433
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 102

Conread position: 80-505
Cow position:
Alignm length: 437
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 177

Conread position: 80-516
Cow position:
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 11

Conread position: 80-536
Cow position:
Alignm length: 464
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 39

Conread position: 80-552
Cow position:
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 141

Conread position: 80-552
Cow position:
Alignm length: 488
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 46

Conread position: 80-561
Cow position:
Alignm length: 493
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 137

Conread position: 80-590
Cow position:
Alignm length: 530
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 241

Conread position: 80-596
Cow position:
Alignm length: 543
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 216

Conread position: 80-601
Cow position:
Alignm length: 535
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 39

Conread position: 80-602
Cow position:
Alignm length: 544
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 33

Conread position: 80-602
Cow position:
Alignm length: 536
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 17

Conread position: 80-602
Cow position:
Alignm length: 535
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 231

Conread position: 80-602
Cow position:
Alignm length: 543
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 80-602
Cow position:
Alignm length: 539
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 80-602
Cow position:
Alignm length: 528
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 89

Conread position: 80-604
Cow position:
Alignm length: 549
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 33

Conread position: 80-606
Cow position:
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 33

Conread position: 80-614
Cow position:
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 180

Conread position: 80-634
Cow position:
Alignm length: 580
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 39

Conread position: 81-404
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 105, 28

Conread position: 81-499
Cow position:
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 9

Conread position: 81-515
Cow position:
Alignm length: 451
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 161

Conread position: 81-604
Cow position:
Alignm length: 532
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 172

Conread position: 82-374
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 107, 221

Conread position: 83-383
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 106, 214

Conread position: 90-378
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 98, 126

Conread position: 90-478
Cow position:
Alignm length: 396
Alignm identity: 258
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 167

Conread position: 90-562
Cow position:
Alignm length: 500
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 141

Conread position: 90-589
Cow position:
Alignm length: 518
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 228

Conread position: 90-596
Cow position:
Alignm length: 521
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 212

Conread position: 90-600
Cow position:
Alignm length: 529
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 218

Conread position: 90-604
Cow position:
Alignm length: 532
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 23

Conread position: 90-633
Cow position:
Alignm length: 567
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 37

Conread position: 91-557
Cow position:
Alignm length: 486
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 227

Conread position: 91-602
Cow position:
Alignm length: 529
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 169

Conread position: 92-394
Cow position:
Alignm length: 307
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 82

Conread position: 92-414
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 90, 53

Conread position: 92-418
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 105, 153

Conread position: 92-424
Cow position:
Alignm length: 345
Alignm identity: 243
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 34, 26

Conread position: 92-449
Cow position:
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 168

Conread position: 92-452
Cow position:
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 92-454
Cow position:
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 16

Conread position: 92-485
Cow position:
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 162

Conread position: 92-549
Cow position:
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 210

Conread position: 92-552
Cow position:
Alignm length: 478
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 179

Conread position: 92-579
Cow position:
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 169

Conread position: 92-583
Cow position:
Alignm length: 509
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 140

Conread position: 92-583
Cow position:
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 81

Conread position: 92-590
Cow position:
Alignm length: 517
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 224

Conread position: 92-602
Cow position:
Alignm length: 529
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 179

Conread position: 95-295
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 24

Conread position: 95-394
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 79, 63

Conread position: 95-589
Cow position:
Alignm length: 515
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 221

Conread position: 95-589
Cow position:
Alignm length: 512
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 139

Conread position: 95-602
Cow position:
Alignm length: 519
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 139

Conread position: 96-364
Cow position:
Alignm length: 284
Alignm identity: 189
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 189

Conread position: 96-421
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 153

Conread position: 96-451
Cow position:
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 163

Conread position: 97-598
Cow position:
Alignm length: 518
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 13

Conread position: 100-394
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 214

Conread position: 100-411
Cow position:
Alignm length: 326
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 83, 217

Conread position: 100-418
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 97, 197

Conread position: 100-420
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 100, 114

Conread position: 100-424
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 216

Conread position: 100-426
Cow position:
Alignm length: 340
Alignm identity: 231
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 91, 220

Conread position: 100-429
Cow position:
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 135

Conread position: 100-441
Cow position:
Alignm length: 350
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 215

Conread position: 100-501
Cow position:
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 219

Conread position: 100-557
Cow position:
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 216

Conread position: 100-586
Cow position:
Alignm length: 501
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 133

Conread position: 100-601
Cow position:
Alignm length: 510
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 93

Conread position: 101-388
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 18

Conread position: 101-429
Cow position:
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 87

Conread position: 101-445
Cow position:
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 46

Conread position: 102-445
Cow position:
Alignm length: 357
Alignm identity: 250
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 87, 115

Conread position: 102-469
Cow position:
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 114

Conread position: 104-602
Cow position:
Alignm length: 512
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 210

Conread position: 122-493
Cow position:
Alignm length: 377
Alignm identity: 261
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 93

Conread position: 132-429
Cow position:
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 185

Conread position: 132-601
Cow position:
Alignm length: 478
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 98

Conread position: 136-507
Cow position:
Alignm length: 395
Alignm identity: 270
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 165

Conread position: 151-589
Cow position:
Alignm length: 453
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 167

Conread position: 166-602
Cow position:
Alignm length: 452
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 94

Conread position: 192-394
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 63

Conread position: 373-602
Cow position:
Alignm length: 231
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 410-605
Cow position:
Alignm length: 196
Alignm identity: 155
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 140, 0

Show alignments to all cow chromosomes.