Cow genome map
| Conread name: | Ova1-OVR010003H11 |
| Conread position: | 1-298 |
| Cow position: | chr11:71390408-71390723 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 50 |
| Conread position: | 1-367 |
| Cow position: | chr11:19500638-19501001 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 51, 159 |
| Conread position: | 1-389 |
| Cow position: | chr11:47899416-47899031 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 182 |
| Conread position: | 1-399 |
| Cow position: | chr11:16342082-16342497 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 46 |
| Conread position: | 1-435 |
| Cow position: | chr11:56821096-56821548 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 292 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 80, 63 |
| Conread position: | 1-441 |
| Cow position: | chr11:85723860-85723403 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 208 |
| Conread position: | 1-558 |
| Cow position: | chr11:62490587-62490017 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 1-588 |
| Cow position: | chr11:63470023-63469440 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 1-589 |
| Cow position: | chr11:64044383-64043801 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 92 |
| Conread position: | 1-590 |
| Cow position: | chr11:13061088-13061668 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 1-602 |
| Cow position: | chr11:40818466-40819104 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 282 |
| Conread position: | 1-602 |
| Cow position: | chr11:63156778-63157370 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 38 |
| Conread position: | 2-207 |
| Cow position: | chr11:18447336-18447553 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 3-411 |
| Cow position: | chr11:62573864-62574267 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 3-634 |
| Cow position: | chr11:39115637-39115013 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 48 |
| Conread position: | 4-403 |
| Cow position: | chr11:81162284-81162691 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 306 |
| Conread position: | 4-604 |
| Cow position: | chr11:42359256-42358661 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 5-365 |
| Cow position: | chr11:2925146-2925512 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 28-590 |
| Cow position: | chr11:66733949-66733386 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 31-394 |
| Cow position: | chr11:45872195-45872569 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 34-290 |
| Cow position: | chr11:52983787-52983525 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 155, 45 |
| Conread position: | 42-601 |
| Cow position: | chr11:17889624-17890182 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 20 |
| Conread position: | 43-320 |
| Cow position: | chr11:69076014-69075727 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 43-590 |
| Cow position: | chr11:4732446-4731890 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 15 |
| Conread position: | 43-602 |
| Cow position: | chr11:62150790-62151339 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 47-589 |
| Cow position: | chr11:23128440-23129000 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 51-583 |
| Cow position: | chr11:259076-259622 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 53-596 |
| Cow position: | chr11:25791602-25792148 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 61-294 |
| Cow position: | chr11:18851992-18851763 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 176, 18 |
| Conread position: | 61-487 |
| Cow position: | chr11:70609882-70609445 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 62-224 |
| Cow position: | chr11:36914642-36914802 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 87, 13 |
| Conread position: | 65-307 |
| Cow position: | chr11:55494760-55494514 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 129, 14 |
| Conread position: | 65-423 |
| Cow position: | chr11:83043282-83043641 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 14 |
| Conread position: | 68-366 |
| Cow position: | chr11:23586719-23586413 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 167 |
| Conread position: | 73-598 |
| Cow position: | chr11:54856690-54856175 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 78-334 |
| Cow position: | chr11:13592805-13592543 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 78-341 |
| Cow position: | chr11:49231943-49231676 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 78-416 |
| Cow position: | chr11:53773751-53773399 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 111, 228 |
| Conread position: | 78-424 |
| Cow position: | chr11:55333979-55333626 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 79-355 |
| Cow position: | chr11:5486082-5485796 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 224 |
| Conread position: | 79-587 |
| Cow position: | chr11:7874207-7873715 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 115 |
| Conread position: | 79-602 |
| Cow position: | chr11:59902959-59902437 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 220 |
| Conread position: | 79-633 |
| Cow position: | chr11:76369452-76370007 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 139 |
| Conread position: | 80-243 |
| Cow position: | chr11:84490432-84490590 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 80-248 |
| Cow position: | chr11:39060535-39060705 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 80-274 |
| Cow position: | chr11:62789198-62788993 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 80-285 |
| Cow position: | chr11:23407532-23407315 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 80-289 |
| Cow position: | chr11:45435148-45434936 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 153 |
| Conread position: | 80-302 |
| Cow position: | chr11:35213100-35213324 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 146 |
| Conread position: | 80-315 |
| Cow position: | chr11:30830546-30830792 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 80-321 |
| Cow position: | chr11:5531-5286 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 110, 212 |
| Conread position: | 80-322 |
| Cow position: | chr11:26845526-26845762 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 114, 163 |
| Conread position: | 80-324 |
| Cow position: | chr11:30955068-30954815 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 111, 236 |
| Conread position: | 80-330 |
| Cow position: | chr11:34646657-34646402 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 108, 174 |
| Conread position: | 80-360 |
| Cow position: | chr11:11558239-11557952 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 107, 240 |
| Conread position: | 80-370 |
| Cow position: | chr11:29960363-29960078 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 80-377 |
| Cow position: | chr11:65762523-65762830 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 86, 245 |
| Conread position: | 80-378 |
| Cow position: | chr11:11469580-11469868 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 80-378 |
| Cow position: | chr11:62620444-62620150 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 171 |
| Conread position: | 80-394 |
| Cow position: | chr11:20238744-20238422 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 227 |
| Conread position: | 80-394 |
| Cow position: | chr11:34121267-34120948 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 156 |
| Conread position: | 80-400 |
| Cow position: | chr11:42043928-42044244 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 80-401 |
| Cow position: | chr11:33348119-33348443 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 96, 120 |
| Conread position: | 80-416 |
| Cow position: | chr11:11232388-11232728 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 46 |
| Conread position: | 80-418 |
| Cow position: | chr11:17036460-17036827 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 215 |
| Conread position: | 80-421 |
| Cow position: | chr11:45646526-45646869 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 39 |
| Conread position: | 80-424 |
| Cow position: | chr11:50778435-50778088 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 92 |
| Conread position: | 80-424 |
| Cow position: | chr11:67600852-67600486 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 80-428 |
| Cow position: | chr11:65826683-65827017 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 80-430 |
| Cow position: | chr11:73353992-73354343 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 124, 102 |
| Conread position: | 80-454 |
| Cow position: | chr11:41985978-41986355 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 235 |
| Conread position: | 80-498 |
| Cow position: | chr11:68905009-68905405 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 102, 198 |
| Conread position: | 80-501 |
| Cow position: | chr11:35684433-35684857 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 113 |
| Conread position: | 80-515 |
| Cow position: | chr11:30355126-30354690 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 151 |
| Conread position: | 80-517 |
| Cow position: | chr11:2092402-2091973 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 72 |
| Conread position: | 80-535 |
| Cow position: | chr11:80923256-80923727 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 47 |
| Conread position: | 80-542 |
| Cow position: | chr11:80819937-80820398 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 39 |
| Conread position: | 80-549 |
| Cow position: | chr11:18698947-18698449 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 80-549 |
| Cow position: | chr11:76606740-76606283 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 80-553 |
| Cow position: | chr11:36987017-36986561 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 112 |
| Conread position: | 80-583 |
| Cow position: | chr11:25387136-25386629 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 249 |
| Conread position: | 80-587 |
| Cow position: | chr11:44636686-44637207 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 236 |
| Conread position: | 80-588 |
| Cow position: | chr11:44032079-44031551 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 245 |
| Conread position: | 80-589 |
| Cow position: | chr11:69119361-69118850 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 170 |
| Conread position: | 80-590 |
| Cow position: | chr11:43430389-43430909 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 44 |
| Conread position: | 80-600 |
| Cow position: | chr11:52297153-52297682 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 236 |
| Conread position: | 80-602 |
| Cow position: | chr11:27248558-27248034 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 48 |
| Conread position: | 80-602 |
| Cow position: | chr11:50152746-50153275 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 238 |
| Conread position: | 80-603 |
| Cow position: | chr11:35580328-35579794 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 239 |
| Conread position: | 80-609 |
| Cow position: | chr11:73512375-73512892 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 114 |
| Conread position: | 81-239 |
| Cow position: | chr11:24599321-24599486 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 107, 18 |
| Conread position: | 81-278 |
| Cow position: | chr11:47772323-47772531 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 81-315 |
| Cow position: | chr11:39499423-39499182 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 101, 181 |
| Conread position: | 81-504 |
| Cow position: | chr11:82796222-82796637 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 108, 134 |
| Conread position: | 81-514 |
| Cow position: | chr11:28644154-28643717 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 240 |
| Conread position: | 81-589 |
| Cow position: | chr11:48272267-48271752 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 238 |
| Conread position: | 81-601 |
| Cow position: | chr11:44234422-44233907 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 59 |
| Conread position: | 82-229 |
| Cow position: | chr11:33409196-33409347 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 82-403 |
| Cow position: | chr11:2917520-2917837 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 65 |
| Conread position: | 83-224 |
| Cow position: | chr11:54218779-54218635 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 84-396 |
| Cow position: | chr11:66188253-66188574 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 85-312 |
| Cow position: | chr11:16906988-16907217 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 85-602 |
| Cow position: | chr11:16261962-16262517 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 364 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 90-411 |
| Cow position: | chr11:34032145-34032464 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 92, 29 |
| Conread position: | 90-417 |
| Cow position: | chr11:52380814-52381145 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 220 |
| Conread position: | 90-424 |
| Cow position: | chr11:10620270-10620607 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 146 |
| Conread position: | 90-449 |
| Cow position: | chr11:70273364-70272997 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 227 |
| Conread position: | 90-549 |
| Cow position: | chr11:4207369-4206892 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 222 |
| Conread position: | 91-549 |
| Cow position: | chr11:1849114-1849569 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 141 |
| Conread position: | 92-264 |
| Cow position: | chr11:83032736-83032558 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 57, 48 |
| Conread position: | 92-392 |
| Cow position: | chr11:3234131-3233832 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 120, 98 |
| Conread position: | 92-394 |
| Cow position: | chr11:77319470-77319173 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 174 |
| Conread position: | 92-413 |
| Cow position: | chr11:24937721-24937392 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 192 |
| Conread position: | 92-418 |
| Cow position: | chr11:17083254-17083573 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 127 |
| Conread position: | 92-419 |
| Cow position: | chr11:83323619-83323300 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 109, 94 |
| Conread position: | 92-429 |
| Cow position: | chr11:11125719-11125376 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 222 |
| Conread position: | 92-486 |
| Cow position: | chr11:70620100-70619711 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 142 |
| Conread position: | 94-428 |
| Cow position: | chr11:67804803-67804467 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 88, 115 |
| Conread position: | 95-342 |
| Cow position: | chr11:15339116-15338876 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 95-359 |
| Cow position: | chr11:63434005-63434275 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 95-394 |
| Cow position: | chr11:55052924-55052623 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 83 |
| Conread position: | 96-264 |
| Cow position: | chr11:69978022-69977852 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 141, 155 |
| Conread position: | 96-416 |
| Cow position: | chr11:30911952-30912265 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 96-498 |
| Cow position: | chr11:64090045-64090441 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 96-598 |
| Cow position: | chr11:67747336-67746824 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 220 |
| Conread position: | 97-434 |
| Cow position: | chr11:24602015-24601674 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 108 |
| Conread position: | 97-468 |
| Cow position: | chr11:53553269-53552934 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 85 |
| Conread position: | 100-345 |
| Cow position: | chr11:72375635-72375890 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 100-386 |
| Cow position: | chr11:57724777-57725071 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 93, 214 |
| Conread position: | 100-394 |
| Cow position: | chr11:56728997-56728696 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 87, 161 |
| Conread position: | 100-426 |
| Cow position: | chr11:18243894-18244225 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 34 |
| Conread position: | 100-453 |
| Cow position: | chr11:71868555-71868914 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 90, 219 |
| Conread position: | 100-461 |
| Cow position: | chr11:6233832-6234196 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 82, 170 |
| Conread position: | 100-490 |
| Cow position: | chr11:4436367-4435974 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 285 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 81, 94 |
| Conread position: | 100-515 |
| Cow position: | chr11:3780370-3780805 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 217 |
| Conread position: | 100-535 |
| Cow position: | chr11:61203213-61202761 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 207 |
| Conread position: | 100-554 |
| Cow position: | chr11:55744515-55744062 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 100-561 |
| Cow position: | chr11:77745204-77745682 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 205 |
| Conread position: | 101-422 |
| Cow position: | chr11:21549527-21549216 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 85, 124 |
| Conread position: | 101-563 |
| Cow position: | chr11:61427641-61427196 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 101-601 |
| Cow position: | chr11:10213517-10214011 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 138 |
| Conread position: | 101-602 |
| Cow position: | chr11:33293732-33294250 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 221 |
| Conread position: | 102-243 |
| Cow position: | chr11:261222-261363 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 91 |
| Conread position: | 102-462 |
| Cow position: | chr11:287290-287653 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 103, 89 |
| Conread position: | 102-602 |
| Cow position: | chr11:33349655-33350161 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 216 |
| Conread position: | 103-394 |
| Cow position: | chr11:2907482-2907776 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 24 |
| Conread position: | 104-508 |
| Cow position: | chr11:16910315-16910734 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 200 |
| Conread position: | 105-418 |
| Cow position: | chr11:15632511-15632831 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 107-602 |
| Cow position: | chr11:42792932-42793420 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 209 |
| Conread position: | 120-602 |
| Cow position: | chr11:6154436-6153954 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 121-487 |
| Cow position: | chr11:955394-955020 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 127-602 |
| Cow position: | chr11:16251223-16251717 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 188 |
| Conread position: | 134-596 |
| Cow position: | chr11:38573517-38573991 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 134 |
| Conread position: | 139-448 |
| Cow position: | chr11:25320064-25319745 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 149-561 |
| Cow position: | chr11:4412023-4412438 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 48 |
| Conread position: | 151-551 |
| Cow position: | chr11:2309869-2309463 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 130 |
| Conread position: | 151-633 |
| Cow position: | chr11:67950975-67951437 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 406, 45 |
| Conread position: | 155-596 |
| Cow position: | chr11:64334844-64334402 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 187-418 |
| Cow position: | chr11:75355564-75355334 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 63 |
| Conread position: | 195-408 |
| Cow position: | chr11:59370960-59370749 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 78, 71 |
| Conread position: | 199-602 |
| Cow position: | chr11:8827720-8827322 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 430-590 |
| Cow position: | chr11:4068135-4067978 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 137, 6 |
Show alignments to all cow chromosomes.