Cow genome map


           Conread name:
           Ova1-OVR010003H11
        

               Conread position:
               1-394
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 143
               

               Conread position:
               1-457
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               81, 71
               

               Conread position:
               1-485
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 243
               

               Conread position:
               1-510
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 260
               

               Conread position:
               1-556
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 81
               

               Conread position:
               43-356
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               54, 36
               

               Conread position:
               43-602
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 37
               

               Conread position:
               45-516
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               46-368
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               46-602
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               53-502
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 26
               

               Conread position:
               60-433
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               60-554
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 115
               

               Conread position:
               64-248
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               123, 15
               

               Conread position:
               65-420
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 15
               

               Conread position:
               65-514
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 15
               

               Conread position:
               65-602
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               67-550
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               68-243
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 82
               

               Conread position:
               79-362
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 174
               

               Conread position:
               79-590
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               80-235
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               80-264
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               80-274
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               80-279
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               80-331
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               102, 198
               

               Conread position:
               80-340
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               80-384
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               107, 131
               

               Conread position:
               80-394
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               189, 114
               

               Conread position:
               80-394
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 11
               

               Conread position:
               80-411
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 160
               

               Conread position:
               80-418
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               60, 86
               

               Conread position:
               80-427
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               119, 113
               

               Conread position:
               80-440
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 39
               

               Conread position:
               80-444
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               80-540
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 26
               

               Conread position:
               80-561
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 137
               

               Conread position:
               80-590
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               487, 102
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 167
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 61
               

               Conread position:
               80-603
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 183
               

               Conread position:
               80-606
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 244
               

               Conread position:
               81-276
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               81-414
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 59
               

               Conread position:
               81-545
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 47
               

               Conread position:
               82-299
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               107, 194
               

               Conread position:
               83-486
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               83-522
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               34, 91
               

               Conread position:
               84-476
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               84-549
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 35
               

               Conread position:
               84-561
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 22
               

               Conread position:
               90-420
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               90-420
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               78, 204
               

               Conread position:
               90-469
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 158
               

               Conread position:
               90-579
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 113
               

               Conread position:
               90-603
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 168
               

               Conread position:
               92-394
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               145, 50
               

               Conread position:
               92-563
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               94-407
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 130
               

               Conread position:
               95-429
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               96-394
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               96-428
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 95
               

               Conread position:
               97-361
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 197
               

               Conread position:
               100-419
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               97, 154
               

               Conread position:
               101-553
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               101-604
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               337
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               102-598
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 130
               

               Conread position:
               106-596
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 211
               

               Conread position:
               128-333
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               66, 126
               

               Conread position:
               133-421
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 7
               

               Conread position:
               149-429
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               152-345
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 157
               

               Conread position:
               441-602
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.