Cow genome map
| Conread name: | Ova1-OVR010003H11 |
| Conread position: | 1-222 |
| Cow position: | chr13:17089709-17089476 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 1-234 |
| Cow position: | chr13:18181947-18181714 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 187, 46 |
| Conread position: | 1-276 |
| Cow position: | chr13:7265302-7265020 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 83 |
| Conread position: | 1-290 |
| Cow position: | chr13:15194917-15194613 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 50, 83 |
| Conread position: | 1-302 |
| Cow position: | chr13:2803290-2803599 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 65 |
| Conread position: | 1-302 |
| Cow position: | chr13:58763805-58763501 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 51, 88 |
| Conread position: | 1-319 |
| Cow position: | chr13:8374957-8374626 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 125 |
| Conread position: | 1-332 |
| Cow position: | chr13:49508027-49507690 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 100, 49 |
| Conread position: | 1-359 |
| Cow position: | chr13:19188118-19188486 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 1-394 |
| Cow position: | chr13:17745062-17745456 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 122 |
| Conread position: | 1-404 |
| Cow position: | chr13:12206865-12207271 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 51, 122 |
| Conread position: | 1-421 |
| Cow position: | chr13:20881117-20880681 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 302 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 1-421 |
| Cow position: | chr13:21242272-21241847 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 50 |
| Conread position: | 1-429 |
| Cow position: | chr13:54094631-54095057 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 72, 52 |
| Conread position: | 1-430 |
| Cow position: | chr13:20784398-20784842 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-484 |
| Cow position: | chr13:15233750-15234214 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 1-553 |
| Cow position: | chr13:59688059-59687492 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 1-590 |
| Cow position: | chr13:12989666-12990260 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 195 |
| Conread position: | 1-602 |
| Cow position: | chr13:25435302-25434702 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 80 |
| Conread position: | 7-586 |
| Cow position: | chr13:17821448-17820851 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 20-602 |
| Cow position: | chr13:22085911-22085331 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 290 |
| Conread position: | 31-602 |
| Cow position: | chr13:7663567-7663005 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 18 |
| Conread position: | 38-535 |
| Cow position: | chr13:40651794-40652292 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 43-393 |
| Cow position: | chr13:37803755-37804095 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 43-434 |
| Cow position: | chr13:17971165-17970776 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 45-413 |
| Cow position: | chr13:25547716-25547356 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 45-429 |
| Cow position: | chr13:26261922-26261541 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 46-426 |
| Cow position: | chr13:42200486-42200868 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 46-604 |
| Cow position: | chr13:35526328-35525784 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 49-359 |
| Cow position: | chr13:52055722-52055414 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 49-419 |
| Cow position: | chr13:55674338-55673962 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 51-404 |
| Cow position: | chr13:43479932-43480289 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 29 |
| Conread position: | 53-324 |
| Cow position: | chr13:54389148-54388870 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 138, 248 |
| Conread position: | 53-477 |
| Cow position: | chr13:25817402-25817814 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 26 |
| Conread position: | 62-307 |
| Cow position: | chr13:62518449-62518196 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 160 |
| Conread position: | 65-331 |
| Cow position: | chr13:18696728-18697003 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 65-603 |
| Cow position: | chr13:31813760-31814293 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 173 |
| Conread position: | 66-494 |
| Cow position: | chr13:17292243-17291816 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 15 |
| Conread position: | 70-318 |
| Cow position: | chr13:17966318-17966064 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 77-334 |
| Cow position: | chr13:54582771-54583038 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 79-274 |
| Cow position: | chr13:46329707-46329501 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 79-321 |
| Cow position: | chr13:23512269-23512515 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 12 |
| Conread position: | 79-378 |
| Cow position: | chr13:20509633-20509933 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 12, 6 |
| Conread position: | 79-482 |
| Cow position: | chr13:13088928-13089329 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 60 |
| Conread position: | 79-549 |
| Cow position: | chr13:30798621-30799095 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 225 |
| Conread position: | 79-552 |
| Cow position: | chr13:46515960-46516438 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 198 |
| Conread position: | 80-235 |
| Cow position: | chr13:20314722-20314559 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 80-275 |
| Cow position: | chr13:37528053-37527864 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 172, 102 |
| Conread position: | 80-289 |
| Cow position: | chr13:21136005-21135782 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 80-308 |
| Cow position: | chr13:20288238-20288466 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 157, 47 |
| Conread position: | 80-318 |
| Cow position: | chr13:18058350-18058104 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 108, 227 |
| Conread position: | 80-322 |
| Cow position: | chr13:17569201-17568950 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 102, 60 |
| Conread position: | 80-344 |
| Cow position: | chr13:20473782-20473520 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 107, 181 |
| Conread position: | 80-368 |
| Cow position: | chr13:21283804-21283515 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 117, 175 |
| Conread position: | 80-377 |
| Cow position: | chr13:24230114-24230413 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 121, 111 |
| Conread position: | 80-389 |
| Cow position: | chr13:15529137-15528819 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 241 |
| Conread position: | 80-394 |
| Cow position: | chr13:15192986-15192677 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 108, 57 |
| Conread position: | 80-394 |
| Cow position: | chr13:20839466-20839784 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 113, 229 |
| Conread position: | 80-416 |
| Cow position: | chr13:13176550-13176889 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 224 |
| Conread position: | 80-417 |
| Cow position: | chr13:15885122-15884773 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 238 |
| Conread position: | 80-418 |
| Cow position: | chr13:7076157-7076498 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 102, 75 |
| Conread position: | 80-420 |
| Cow position: | chr13:8524718-8524377 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 182 |
| Conread position: | 80-426 |
| Cow position: | chr13:23478930-23479279 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 147 |
| Conread position: | 80-427 |
| Cow position: | chr13:35659660-35660004 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 80-428 |
| Cow position: | chr13:11460533-11460875 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 134 |
| Conread position: | 80-428 |
| Cow position: | chr13:23856111-23856467 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 78 |
| Conread position: | 80-428 |
| Cow position: | chr13:40722807-40722458 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 114, 177 |
| Conread position: | 80-429 |
| Cow position: | chr13:45023309-45022955 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 47 |
| Conread position: | 80-429 |
| Cow position: | chr13:48037523-48037873 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 80-441 |
| Cow position: | chr13:37818851-37818500 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 117, 40 |
| Conread position: | 80-452 |
| Cow position: | chr13:6079512-6079143 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 80-452 |
| Cow position: | chr13:18172236-18172602 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 180 |
| Conread position: | 80-514 |
| Cow position: | chr13:46525526-46525104 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 33 |
| Conread position: | 80-534 |
| Cow position: | chr13:151863-152301 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 157 |
| Conread position: | 80-539 |
| Cow position: | chr13:13320697-13321139 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 80-548 |
| Cow position: | chr13:9975176-9974694 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 240 |
| Conread position: | 80-549 |
| Cow position: | chr13:6974061-6974538 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 233 |
| Conread position: | 80-561 |
| Cow position: | chr13:12670551-12670072 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 162 |
| Conread position: | 80-566 |
| Cow position: | chr13:41806672-41807157 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 244 |
| Conread position: | 80-578 |
| Cow position: | chr13:56155251-56154761 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 51 |
| Conread position: | 80-580 |
| Cow position: | chr13:52057457-52057944 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 126 |
| Conread position: | 80-590 |
| Cow position: | chr13:21235771-21235275 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 95 |
| Conread position: | 80-596 |
| Cow position: | chr13:40943144-40943665 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 12 |
| Conread position: | 80-600 |
| Cow position: | chr13:13260903-13261441 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 47 |
| Conread position: | 80-602 |
| Cow position: | chr13:971997-971468 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 48 |
| Conread position: | 80-602 |
| Cow position: | chr13:10929088-10928564 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 80-602 |
| Cow position: | chr13:20666486-20665963 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 39 |
| Conread position: | 80-602 |
| Cow position: | chr13:20684228-20683698 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 185 |
| Conread position: | 80-602 |
| Cow position: | chr13:24753787-24754318 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 80-602 |
| Cow position: | chr13:51940634-51941162 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 81-312 |
| Cow position: | chr13:11808478-11808699 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 155, 45 |
| Conread position: | 81-403 |
| Cow position: | chr13:17439867-17439539 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 50 |
| Conread position: | 81-408 |
| Cow position: | chr13:24369483-24369817 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 25 |
| Conread position: | 81-427 |
| Cow position: | chr13:13501717-13501371 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 193 |
| Conread position: | 83-358 |
| Cow position: | chr13:5758439-5758164 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 223 |
| Conread position: | 83-418 |
| Cow position: | chr13:17114476-17114138 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 176 |
| Conread position: | 83-484 |
| Cow position: | chr13:43194072-43194481 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 276 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 57, 233 |
| Conread position: | 83-535 |
| Cow position: | chr13:1043066-1042597 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 245 |
| Conread position: | 83-589 |
| Cow position: | chr13:311341-311847 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 61 |
| Conread position: | 84-509 |
| Cow position: | chr13:17622192-17622617 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 128 |
| Conread position: | 85-424 |
| Cow position: | chr13:11955212-11954869 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 35, 203 |
| Conread position: | 90-348 |
| Cow position: | chr13:13954483-13954217 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 101, 143 |
| Conread position: | 90-511 |
| Cow position: | chr13:19138350-19138772 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 131 |
| Conread position: | 91-355 |
| Cow position: | chr13:49022957-49022692 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 86, 142 |
| Conread position: | 92-295 |
| Cow position: | chr13:19279007-19279213 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 98, 54 |
| Conread position: | 92-299 |
| Cow position: | chr13:15144454-15144244 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 153 |
| Conread position: | 92-320 |
| Cow position: | chr13:5671674-5671445 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 86 |
| Conread position: | 92-342 |
| Cow position: | chr13:15902936-15903182 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 99, 139 |
| Conread position: | 92-381 |
| Cow position: | chr13:9593417-9593711 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 223 |
| Conread position: | 92-419 |
| Cow position: | chr13:20706293-20705960 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 223 |
| Conread position: | 92-442 |
| Cow position: | chr13:54702098-54702456 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 225 |
| Conread position: | 92-601 |
| Cow position: | chr13:43762080-43762598 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 92-632 |
| Cow position: | chr13:15166730-15167271 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 94-412 |
| Cow position: | chr13:55316277-55315953 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 95-552 |
| Cow position: | chr13:20820914-20820462 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 104 |
| Conread position: | 95-602 |
| Cow position: | chr13:25062328-25062846 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 95-602 |
| Cow position: | chr13:46181707-46182201 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 196 |
| Conread position: | 96-307 |
| Cow position: | chr13:52929627-52929845 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 97-394 |
| Cow position: | chr13:43869196-43868901 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 166 |
| Conread position: | 97-533 |
| Cow position: | chr13:21176405-21175966 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 219 |
| Conread position: | 98-247 |
| Cow position: | chr13:47022283-47022436 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 99-589 |
| Cow position: | chr13:38284059-38283569 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 145 |
| Conread position: | 100-353 |
| Cow position: | chr13:607338-607085 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 148, 85 |
| Conread position: | 100-366 |
| Cow position: | chr13:14771372-14771650 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 93, 218 |
| Conread position: | 100-389 |
| Cow position: | chr13:60340726-60341026 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 90, 122 |
| Conread position: | 100-394 |
| Cow position: | chr13:5263361-5263069 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 87, 148 |
| Conread position: | 100-394 |
| Cow position: | chr13:7059382-7059692 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 81, 229 |
| Conread position: | 100-426 |
| Cow position: | chr13:25926710-25927042 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 91, 164 |
| Conread position: | 100-455 |
| Cow position: | chr13:61047134-61047485 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 144 |
| Conread position: | 100-469 |
| Cow position: | chr13:23167181-23166804 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 82, 221 |
| Conread position: | 100-580 |
| Cow position: | chr13:56686354-56686837 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 100-583 |
| Cow position: | chr13:12045418-12044932 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 154 |
| Conread position: | 100-602 |
| Cow position: | chr13:60509200-60508695 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 133 |
| Conread position: | 101-517 |
| Cow position: | chr13:890248-889843 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 41 |
| Conread position: | 101-527 |
| Cow position: | chr13:15958535-15958968 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 211 |
| Conread position: | 101-602 |
| Cow position: | chr13:42113940-42114438 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 156 |
| Conread position: | 101-602 |
| Cow position: | chr13:58043549-58044056 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 139 |
| Conread position: | 102-590 |
| Cow position: | chr13:8202944-8202473 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 85 |
| Conread position: | 102-590 |
| Cow position: | chr13:19883115-19882623 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 103-589 |
| Cow position: | chr13:61977037-61976553 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 200 |
| Conread position: | 103-602 |
| Cow position: | chr13:36353034-36352561 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 132 |
| Conread position: | 121-424 |
| Cow position: | chr13:30693655-30693949 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 127 |
| Conread position: | 123-333 |
| Cow position: | chr13:28652746-28652959 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 128-602 |
| Cow position: | chr13:20440633-20440173 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 110 |
| Conread position: | 132-515 |
| Cow position: | chr13:13265759-13266140 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 134-602 |
| Cow position: | chr13:52922049-52922529 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 177 |
| Conread position: | 149-412 |
| Cow position: | chr13:17815747-17816007 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 101, 42 |
| Conread position: | 149-429 |
| Cow position: | chr13:60329727-60330004 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 151 |
| Conread position: | 149-602 |
| Cow position: | chr13:12682577-12682113 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 110 |
| Conread position: | 151-602 |
| Cow position: | chr13:20570698-20571154 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 165 |
| Conread position: | 153-606 |
| Cow position: | chr13:20864043-20863589 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 107 |
| Conread position: | 422-596 |
| Cow position: | chr13:48165227-48165056 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 145, 18 |
Show alignments to all cow chromosomes.