Cow genome map


           Conread name:
           Ova1-OVR010003H11
        

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               51, 267
               

               Conread position:
               1-438
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               73, 188
               

               Conread position:
               1-602
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 125
               

               Conread position:
               4-426
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 323
               

               Conread position:
               20-243
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 64
               

               Conread position:
               31-399
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               42-224
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               43-244
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               45-451
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               289
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               49-305
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               49-420
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               49-459
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 30
               

               Conread position:
               65-549
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 14
               

               Conread position:
               65-567
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 16
               

               Conread position:
               72-417
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 247
               

               Conread position:
               77-551
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 34
               

               Conread position:
               77-601
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 63
               

               Conread position:
               78-394
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 238
               

               Conread position:
               79-378
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               79-549
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 114
               

               Conread position:
               79-602
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 85
               

               Conread position:
               80-308
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               80-349
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               80-362
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               25, 95
               

               Conread position:
               80-374
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               156, 18
               

               Conread position:
               80-377
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 40
               

               Conread position:
               80-377
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               41, 37
               

               Conread position:
               80-377
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               47, 243
               

               Conread position:
               80-383
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               122, 238
               

               Conread position:
               80-386
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 243
               

               Conread position:
               80-430
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 199
               

               Conread position:
               80-481
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 42
               

               Conread position:
               80-483
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 21
               

               Conread position:
               80-491
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 47
               

               Conread position:
               80-548
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 234
               

               Conread position:
               80-549
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               80-549
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 180
               

               Conread position:
               80-561
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 74
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 195
               

               Conread position:
               81-308
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 66
               

               Conread position:
               82-601
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 167
               

               Conread position:
               83-428
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               43, 37
               

               Conread position:
               83-460
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               27, 231
               

               Conread position:
               84-377
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               105, 197
               

               Conread position:
               84-394
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               84-428
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               105, 188
               

               Conread position:
               85-381
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               87-589
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 131
               

               Conread position:
               89-428
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 42
               

               Conread position:
               90-305
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               90-397
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               154, 91
               

               Conread position:
               90-588
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               90-602
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 90
               

               Conread position:
               92-302
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               92-353
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               92-394
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               92-408
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               302, 48
               

               Conread position:
               92-416
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 222
               

               Conread position:
               92-427
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               77, 183
               

               Conread position:
               92-602
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 132
               

               Conread position:
               95-426
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 85
               

               Conread position:
               96-581
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               100-355
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 221
               

               Conread position:
               100-387
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               100-393
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               126, 79
               

               Conread position:
               100-394
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               97, 125
               

               Conread position:
               100-394
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               203, 97
               

               Conread position:
               100-413
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               45, 93
               

               Conread position:
               100-416
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 294
               

               Conread position:
               100-429
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 208
               

               Conread position:
               100-430
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               94, 194
               

               Conread position:
               100-451
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 52
               

               Conread position:
               100-580
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 217
               

               Conread position:
               100-598
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               100-602
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 215
               

               Conread position:
               101-602
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 214
               

               Conread position:
               101-602
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               102-344
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               90, 137
               

               Conread position:
               104-607
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 86
               

               Conread position:
               131-593
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 142
               

               Conread position:
               148-525
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 140
               

               Conread position:
               150-596
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 104
               

               Conread position:
               190-590
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 116
               

               Conread position:
               279-590
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 5
               
Show alignments to all cow chromosomes.