Cow genome map

Conread name: Ova1-OVR010003H11

Conread position: 1-223
Cow position: chr15:37284386-37284607 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 188, 41

Conread position: 1-223
Cow position: chr15:39090225-39090444 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 198, 50

Conread position: 1-243
Cow position: chr15:18647308-18647549 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 50

Conread position: 1-282
Cow position: chr15:51307763-51307465 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 48

Conread position: 1-325
Cow position: chr15:6905011-6905317 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 128, 49

Conread position: 1-330
Cow position: chr15:36887746-36888084 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 190

Conread position: 1-368
Cow position: chr15:23696995-23696622 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 266

Conread position: 1-378
Cow position: chr15:26573305-26573692 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 261
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 43, 71

Conread position: 1-419
Cow position: chr15:27973299-27972868 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 295
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 321

Conread position: 1-434
Cow position: chr15:5729863-5730300 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 1-585
Cow position: chr15:18720242-18720829 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 54

Conread position: 1-602
Cow position: chr15:14870662-14871271 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 40

Conread position: 2-318
Cow position: chr15:16261238-16261562 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 50, 131

Conread position: 4-361
Cow position: chr15:7456627-7456985 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 47

Conread position: 31-549
Cow position: chr15:33624913-33625444 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 49

Conread position: 43-438
Cow position: chr15:36259635-36259225 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 46-308
Cow position: chr15:53716406-53716673 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 153, 33

Conread position: 47-387
Cow position: chr15:49922106-49922454 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 33

Conread position: 51-557
Cow position: chr15:22532226-22532719 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 106

Conread position: 52-287
Cow position: chr15:30470997-30470750 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 209

Conread position: 58-633
Cow position: chr15:33284859-33285426 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 259

Conread position: 60-458
Cow position: chr15:16307408-16307802 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 19

Conread position: 65-331
Cow position: chr15:8354032-8354305 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 128, 13

Conread position: 65-338
Cow position: chr15:275645-275912 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 134, 62

Conread position: 65-360
Cow position: chr15:41125582-41125280 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 125, 23

Conread position: 65-394
Cow position: chr15:39598233-39598559 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 104, 15

Conread position: 65-549
Cow position: chr15:46563493-46563001 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 14

Conread position: 66-292
Cow position: chr15:17337354-17337583 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 132, 13

Conread position: 70-428
Cow position: chr15:16476747-16476387 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 160

Conread position: 72-378
Cow position: chr15:225808-225498 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 110, 146

Conread position: 77-527
Cow position: chr15:47042630-47042171 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 167

Conread position: 78-486
Cow position: chr15:52482826-52482415 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 19

Conread position: 78-486
Cow position: chr15:53164023-53164433 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 19

Conread position: 78-602
Cow position: chr15:17233195-17233715 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 13

Conread position: 79-602
Cow position: chr15:608149-608687 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 234

Conread position: 80-227
Cow position: chr15:44237421-44237574 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 80-344
Cow position: chr15:23275546-23275809 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 11

Conread position: 80-363
Cow position: chr15:33643092-33643376 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 185

Conread position: 80-392
Cow position: chr15:10088323-10088633 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 45, 38

Conread position: 80-392
Cow position: chr15:11996023-11995706 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 115, 237

Conread position: 80-405
Cow position: chr15:24128035-24128353 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 111, 35

Conread position: 80-423
Cow position: chr15:29604696-29604366 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 240
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 314, 108

Conread position: 80-424
Cow position: chr15:24994509-24994176 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 169

Conread position: 80-428
Cow position: chr15:8230563-8230222 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 39

Conread position: 80-433
Cow position: chr15:4093929-4093564 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 80-517
Cow position: chr15:46868710-46868264 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 18

Conread position: 80-535
Cow position: chr15:43626473-43626919 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 227

Conread position: 80-554
Cow position: chr15:26079347-26078888 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 33

Conread position: 80-561
Cow position: chr15:10457008-10456511 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 39

Conread position: 80-561
Cow position: chr15:25208753-25208280 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 71

Conread position: 80-588
Cow position: chr15:23568123-23567606 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 180

Conread position: 80-601
Cow position: chr15:11011599-11011050 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 234

Conread position: 80-602
Cow position: chr15:795017-794480 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 80-602
Cow position: chr15:5234993-5234474 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 57

Conread position: 80-602
Cow position: chr15:20351836-20352374 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 193

Conread position: 80-602
Cow position: chr15:41360946-41360431 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 136

Conread position: 80-633
Cow position: chr15:20534446-20533890 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 181

Conread position: 81-345
Cow position: chr15:5443989-5444255 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 227

Conread position: 81-481
Cow position: chr15:22939320-22938925 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 284
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 38

Conread position: 81-603
Cow position: chr15:30047541-30047004 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 238

Conread position: 82-372
Cow position: chr15:49257870-49258176 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 100, 146

Conread position: 82-536
Cow position: chr15:20391269-20390826 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 196

Conread position: 83-375
Cow position: chr15:24305474-24305176 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 108, 39

Conread position: 83-404
Cow position: chr15:41225556-41225231 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 41

Conread position: 83-483
Cow position: chr15:13515373-13515780 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 233

Conread position: 85-374
Cow position: chr15:26919265-26918972 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 97, 5

Conread position: 90-416
Cow position: chr15:52451627-52451970 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 223
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 217

Conread position: 90-474
Cow position: chr15:30316553-30316184 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 84

Conread position: 90-596
Cow position: chr15:1083362-1082861 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 226

Conread position: 91-292
Cow position: chr15:36353683-36353893 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 167

Conread position: 92-394
Cow position: chr15:50322610-50322916 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 97, 227

Conread position: 92-517
Cow position: chr15:17870268-17869849 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 207

Conread position: 92-522
Cow position: chr15:20487187-20486757 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 94-429
Cow position: chr15:16822956-16823293 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 37

Conread position: 100-355
Cow position: chr15:4861880-4861628 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 148, 90

Conread position: 100-369
Cow position: chr15:9526454-9526172 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 91

Conread position: 100-424
Cow position: chr15:6462473-6462150 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 32, 19

Conread position: 100-443
Cow position: chr15:31283409-31283739 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 91

Conread position: 100-545
Cow position: chr15:20472524-20472073 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 161

Conread position: 100-561
Cow position: chr15:51822177-51822630 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 97

Conread position: 100-574
Cow position: chr15:24797786-24797299 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 201

Conread position: 100-588
Cow position: chr15:15880950-15881438 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 216

Conread position: 100-595
Cow position: chr15:21608696-21608205 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 119

Conread position: 100-602
Cow position: chr15:36435229-36435736 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 217

Conread position: 100-604
Cow position: chr15:363049-363546 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 163

Conread position: 101-515
Cow position: chr15:16543422-16543021 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 90

Conread position: 102-428
Cow position: chr15:11658547-11658208 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 72

Conread position: 113-354
Cow position: chr15:38877267-38877022 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 80, 158

Conread position: 149-589
Cow position: chr15:23702852-23703285 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 104

Conread position: 150-424
Cow position: chr15:23791536-23791809 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 95, 145

Conread position: 152-481
Cow position: chr15:23487092-23486764 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 112

Conread position: 154-416
Cow position: chr15:6586639-6586369 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 160

Conread position: 162-458
Cow position: chr15:53402905-53402616 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 89

Show alignments to all cow chromosomes.