Cow genome map


           Conread name:
           Ova1-OVR010003H11
        

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               188, 41
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               198, 50
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               83, 50
               

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               128, 49
               

               Conread position:
               1-330
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 190
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               70, 266
               

               Conread position:
               1-378
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               43, 71
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               49, 321
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               1-585
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               1-602
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               2-318
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 131
               

               Conread position:
               4-361
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               94, 47
               

               Conread position:
               31-549
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               43-438
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 36
               

               Conread position:
               46-308
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               153, 33
               

               Conread position:
               47-387
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               51-557
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 106
               

               Conread position:
               52-287
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               29, 209
               

               Conread position:
               58-633
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 259
               

               Conread position:
               60-458
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 19
               

               Conread position:
               65-331
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               128, 13
               

               Conread position:
               65-338
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               134, 62
               

               Conread position:
               65-360
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               125, 23
               

               Conread position:
               65-394
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               104, 15
               

               Conread position:
               65-549
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 14
               

               Conread position:
               66-292
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               132, 13
               

               Conread position:
               70-428
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 160
               

               Conread position:
               72-378
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               110, 146
               

               Conread position:
               77-527
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 167
               

               Conread position:
               78-486
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               78-486
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               78-602
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 13
               

               Conread position:
               79-602
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 234
               

               Conread position:
               80-227
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               80-344
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 11
               

               Conread position:
               80-363
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               38, 185
               

               Conread position:
               80-392
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               80-392
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               115, 237
               

               Conread position:
               80-405
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               111, 35
               

               Conread position:
               80-423
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               314, 108
               

               Conread position:
               80-424
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 169
               

               Conread position:
               80-428
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               80-433
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               80-517
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               80-535
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 227
               

               Conread position:
               80-554
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 33
               

               Conread position:
               80-561
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 39
               

               Conread position:
               80-561
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 71
               

               Conread position:
               80-588
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 180
               

               Conread position:
               80-601
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 234
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 57
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 193
               

               Conread position:
               80-602
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 136
               

               Conread position:
               80-633
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 181
               

               Conread position:
               81-345
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               108, 227
               

               Conread position:
               81-481
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               81-603
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 238
               

               Conread position:
               82-372
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               100, 146
               

               Conread position:
               82-536
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 196
               

               Conread position:
               83-375
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               108, 39
               

               Conread position:
               83-404
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               83-483
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 233
               

               Conread position:
               85-374
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               97, 5
               

               Conread position:
               90-416
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 217
               

               Conread position:
               90-474
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 84
               

               Conread position:
               90-596
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 226
               

               Conread position:
               91-292
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               100, 167
               

               Conread position:
               92-394
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               97, 227
               

               Conread position:
               92-517
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 207
               

               Conread position:
               92-522
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               94-429
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               100-355
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               148, 90
               

               Conread position:
               100-369
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 91
               

               Conread position:
               100-424
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               100-443
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 91
               

               Conread position:
               100-545
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 161
               

               Conread position:
               100-561
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 97
               

               Conread position:
               100-574
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 201
               

               Conread position:
               100-588
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 216
               

               Conread position:
               100-595
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 119
               

               Conread position:
               100-602
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 217
               

               Conread position:
               100-604
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 163
               

               Conread position:
               101-515
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 90
               

               Conread position:
               102-428
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 72
               

               Conread position:
               113-354
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               80, 158
               

               Conread position:
               149-589
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 104
               

               Conread position:
               150-424
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               95, 145
               

               Conread position:
               152-481
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 112
               

               Conread position:
               154-416
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               33, 160
               

               Conread position:
               162-458
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 89
               
Show alignments to all cow chromosomes.